RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 ZNF500O60304 480 aaPredicted RBP16.78■□□□□ 0.28
SGCE-202ENST00000415788 CDC27P30260 824 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 SLC16A2P36021 539 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 SCRN1Q12765 414 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 STK3Q13188 491 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 GTF3C6Q969F1 213 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 PDLIM2Q96JY6 352 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 P2RX7Q99572 595 aaKnown RBP16.78■□□□□ 0.28
SGCE-202ENST00000415788 RIOX1Q9H6W3 641 aa16.78■□□□□ 0.28
SGCE-202ENST00000415788 CDKL5O76039 1030 aa16.77■□□□□ 0.27
SGCE-202ENST00000415788 CYP2C8P10632 490 aa16.77■□□□□ 0.27
SGCE-202ENST00000415788 ADD1P35611 737 aaKnown RBP16.77■□□□□ 0.27
SGCE-202ENST00000415788 ATG4CQ96DT6 458 aa16.77■□□□□ 0.27
SGCE-202ENST00000415788 CFHR5Q9BXR6 569 aa16.77■□□□□ 0.27
SGCE-202ENST00000415788 UBA5Q9GZZ9 404 aa16.77■□□□□ 0.27
SGCE-202ENST00000415788 PNMA2Q9UL42 364 aa16.77■□□□□ 0.27
SGCE-202ENST00000415788 NOL7Q9UMY1 257 aaKnown RBP16.77■□□□□ 0.27
SGCE-202ENST00000415788 VWA5AO00534 786 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 ZBED4O75132 1171 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 PLEKHA8P1O95397 391 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 LARGE1O95461 756 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 ZSCAN23Q3MJ62 389 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 ADGRF4Q8IZF3 695 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 SRBD1Q8N5C6 995 aaKnown RBP16.76■□□□□ 0.27
SGCE-202ENST00000415788 TMX3Q96JJ7 454 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 SLC38A10Q9HBR0 1119 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 LMBRD1Q9NUN5 540 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 SAGE1Q9NXZ1 904 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 RBM27Q9P2N5 1060 aaKnown RBP16.76■□□□□ 0.27
SGCE-202ENST00000415788 CTDP1Q9Y5B0 961 aaPredicted RBP16.76■□□□□ 0.27
SGCE-202ENST00000415788 TLR2O60603 784 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 IFNAR1P17181 557 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 OAZ1P54368 228 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
SGCE-202ENST00000415788 BEGAINQ9BUH8 593 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 RANBP17Q9H2T7 1088 aaKnown RBP16.76■□□□□ 0.27
SGCE-202ENST00000415788 NCOA5Q9HCD5 579 aaKnown RBP16.76■□□□□ 0.27
SGCE-202ENST00000415788 RABGAP1Q9Y3P9 1069 aa16.76■□□□□ 0.27
SGCE-202ENST00000415788 CYTH3O43739 400 aa16.75■□□□□ 0.27
SGCE-202ENST00000415788 CSPP1Q1MSJ5 1256 aa16.75■□□□□ 0.27
SGCE-202ENST00000415788 MCTP1Q6DN14 999 aa16.75■□□□□ 0.27
SGCE-202ENST00000415788 NBPF11Q86T75 865 aa16.75■□□□□ 0.27
SGCE-202ENST00000415788 MTMR8Q96EF0 704 aa16.75■□□□□ 0.27
SGCE-202ENST00000415788 RRP36Q96EU6 259 aaKnown RBP16.75■□□□□ 0.27
SGCE-202ENST00000415788 JMJD4Q9H9V9 463 aa16.75■□□□□ 0.27
SGCE-202ENST00000415788 RNF186Q9NXI6 227 aa16.75■□□□□ 0.27
SGCE-202ENST00000415788 ADGRA2Q96PE1 1338 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 ATP2A1O14983 1001 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 FUT2Q10981 343 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 TRAF1Q13077 416 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 CRHR2Q13324 411 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 NTRK3Q16288 839 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 TRIM22Q8IYM9 498 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 NECAB1Q8N987 351 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 LLPHQ9BRT6 129 aaKnown RBP16.74■□□□□ 0.27
SGCE-202ENST00000415788 CPVLQ9H3G5 476 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 SEC63Q9UGP8 760 aaKnown RBP16.74■□□□□ 0.27
SGCE-202ENST00000415788 CNTNAP5Q8WYK1 1306 aa16.74■□□□□ 0.27
SGCE-202ENST00000415788 ZBTB5O15062 677 aa16.73■□□□□ 0.27
SGCE-202ENST00000415788 CDC37Q16543 378 aaPredicted RBP16.73■□□□□ 0.27
SGCE-202ENST00000415788 FAM110CQ1W6H9 321 aa16.73■□□□□ 0.27
SGCE-202ENST00000415788 CMTR1Q8N1G2 835 aaKnown RBP16.73■□□□□ 0.27
SGCE-202ENST00000415788 REPS2Q8NFH8 660 aa16.73■□□□□ 0.27
SGCE-202ENST00000415788 RNF26Q9BY78 433 aaPredicted RBP16.73■□□□□ 0.27
SGCE-202ENST00000415788 VAT1LQ9HCJ6 419 aa16.73■□□□□ 0.27
SGCE-202ENST00000415788 RBPJLQ9UBG7 517 aa16.73■□□□□ 0.27
SGCE-202ENST00000415788 MORF4L1Q9UBU8 362 aa16.73■□□□□ 0.27
SGCE-202ENST00000415788 PNMA6FA0A0J9YX94 578 aa16.73■□□□□ 0.27
SGCE-202ENST00000415788 AKAP17AQ02040 695 aaKnown RBP16.73■□□□□ 0.27
SGCE-202ENST00000415788 SLC35G1Q2M3R5 365 aa16.73■□□□□ 0.27
SGCE-202ENST00000415788 CAVIN1Q6NZI2 390 aaKnown RBP16.73■□□□□ 0.27
SGCE-202ENST00000415788 MTERF4Q7Z6M4 381 aaKnown RBP16.73■□□□□ 0.27
SGCE-202ENST00000415788 CCDC82Q8N4S0 544 aa16.73■□□□□ 0.27
SGCE-202ENST00000415788 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
SGCE-202ENST00000415788 TRPA1O75762 1119 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 ICAM1P05362 532 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 COPB2P35606 906 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 CCNA1P78396 465 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 SSRP1Q08945 709 aaKnown RBP16.72■□□□□ 0.27
SGCE-202ENST00000415788 C17orf99Q6UX52 265 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 HOMER1Q86YM7 354 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 CCDC83Q8IWF9 413 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 ANKRD13CQ8N6S4 541 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 JMYQ8N9B5 988 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 GPRC5AQ8NFJ5 357 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 PIGSQ96S52 555 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 PAGR1Q9BTK6 254 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 TEX13BQ9BXU2 312 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 ZNF214Q9UL59 606 aaPredicted RBP16.72■□□□□ 0.27
SGCE-202ENST00000415788 STK36Q9NRP7 1315 aa16.72■□□□□ 0.27
SGCE-202ENST00000415788 FMNL1O95466 1100 aaPredicted RBP16.71■□□□□ 0.27
SGCE-202ENST00000415788 ST3GAL1Q11201 340 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 TMEM132BQ14DG7 1078 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 QRICH1Q2TAL8 776 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 AMNQ9BXJ7 453 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 SPATC1LQ9H0A9 340 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 WBP1LQ9NX94 342 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 BTBD7Q9P203 1132 aa16.71■□□□□ 0.27
SGCE-202ENST00000415788 V9GY48 417 aaPredicted RBP16.71■□□□□ 0.27
SGCE-202ENST00000415788 RLFQ13129 1914 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms