RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
DDB1-202ENST00000414411 DEFB115Q30KQ5 88 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 TREML2Q5T2D2 321 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 FRMPD2Q68DX3 1309 aaPredicted RBP11.48□□□□□ -0.57
DDB1-202ENST00000414411 GPAT2Q6NUI2 795 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 TMTC3Q6ZXV5 915 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 FASTKD5Q7L8L6 764 aaKnown RBP11.48□□□□□ -0.57
DDB1-202ENST00000414411 SRBD1Q8N5C6 995 aaKnown RBP11.48□□□□□ -0.57
DDB1-202ENST00000414411 BRI3BPQ8WY22 251 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 TMOD4Q9NZQ9 345 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 TMEM232C9JQI7 657 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 CYTH3O43739 400 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 IFNAR1P17181 557 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 GNAQP50148 359 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 MKRN3Q13064 507 aaKnown RBP11.48□□□□□ -0.57
DDB1-202ENST00000414411 CATSPERGQ6ZRH7 1159 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 CMTR1Q8N1G2 835 aaKnown RBP11.48□□□□□ -0.57
DDB1-202ENST00000414411 PTPN18Q99952 460 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 LZTS2Q9BRK4 669 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 UBA5Q9GZZ9 404 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 CPVLQ9H3G5 476 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 RPAP3Q9H6T3 665 aaPredicted RBP11.48□□□□□ -0.57
DDB1-202ENST00000414411 RIOX1Q9H6W3 641 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 GPCPD1Q9NPB8 672 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
DDB1-202ENST00000414411 DHX16O60231 1041 aaKnown RBP11.47□□□□□ -0.57
DDB1-202ENST00000414411 KRT85P78386 507 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 CCDC96Q2M329 555 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 HS1BP3Q53T59 392 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 CYP4F22Q6NT55 531 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 LLPHQ9BRT6 129 aaKnown RBP11.47□□□□□ -0.57
DDB1-202ENST00000414411 SPZ1Q9BXG8 430 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 FEM1BQ9UK73 627 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 AGTPBP1Q9UPW5 1226 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 ELP1O95163 1332 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 CCL15-CCL14A0A0B4J2E2 113 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 USP17L15C9J2P7 530 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 USP17L13C9JLJ4 530 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 USP17L11C9JVI0 530 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 USP17L18D6R9N7 530 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 USP17L22D6RA61 530 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 USP17L17D6RBQ6 530 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 USP17L19D6RCP7 530 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 USP17L20D6RJB6 530 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 LETM1O95202 739 aaPredicted RBP11.47□□□□□ -0.57
DDB1-202ENST00000414411 SLC16A2P36021 539 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 STAT2P52630 851 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 USP17L24Q0WX57 530 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 CCL15Q16663 113 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 GADL1Q6ZQY3 521 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 RNF214Q8ND24 703 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 CHURC1Q8WUH1 139 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 MTMR8Q96EF0 704 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 ZIC5Q96T25 663 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 FBXO28Q9NVF7 368 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 ADAMTS5Q9UNA0 930 aa11.47□□□□□ -0.57
DDB1-202ENST00000414411 MANSC4A6NHS7 340 aaPredicted RBP11.46□□□□□ -0.58
DDB1-202ENST00000414411 BTBD19C9JJ37 291 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 JAK2O60674 1132 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 INHBEP58166 350 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 C1QTNF8P60827 252 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 COG2Q14746 738 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 ANKRD23Q86SG2 305 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 FERMT3Q86UX7 667 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 FAM160B2Q86V87 743 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 ZSCAN30Q86W11 494 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 ADGRF4Q8IZF3 695 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 CCDC82Q8N4S0 544 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 PRPF38AQ8NAV1 312 aaKnown RBP11.46□□□□□ -0.58
DDB1-202ENST00000414411 FAM184AQ8NB25 1140 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 NSUN7Q8NE18 718 aaKnown RBP11.46□□□□□ -0.58
DDB1-202ENST00000414411 SMARCC2Q8TAQ2 1214 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 JMJD4Q9H9V9 463 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 PRR12Q9ULL5 1215 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 SLC45A1Q9Y2W3 748 aa11.46□□□□□ -0.58
DDB1-202ENST00000414411 CNTNAP5Q8WYK1 1306 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 CPLX1O14810 134 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 PRPF3O43395 683 aaKnown RBP11.45□□□□□ -0.58
DDB1-202ENST00000414411 FDPSP14324 419 aaKnown RBP11.45□□□□□ -0.58
DDB1-202ENST00000414411 TM4SF4P48230 202 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 HTRA3P83110 453 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 NOGQ13253 232 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 POTEEQ6S8J3 1075 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 PHKBQ93100 1093 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 FAM212AQ96EL1 285 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 CAPNS2Q96L46 248 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 SLF1Q9BQI6 1058 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 TANGO6Q9C0B7 1094 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 PPP1R9AQ9ULJ8 1098 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 SMCHD1A6NHR9 2005 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 MYPNQ86TC9 1320 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 FLOT1O75955 427 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 CDKL5O76039 1030 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 SYDE2Q5VT97 1194 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 CPLX2Q6PUV4 134 aaKnown RBP11.45□□□□□ -0.58
DDB1-202ENST00000414411 P2RX7Q99572 595 aaKnown RBP11.45□□□□□ -0.58
DDB1-202ENST00000414411 RNF26Q9BY78 433 aaPredicted RBP11.45□□□□□ -0.58
DDB1-202ENST00000414411 HOXC10Q9NYD6 342 aa11.45□□□□□ -0.58
DDB1-202ENST00000414411 V9GY48 417 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms