RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PAGR1Q9BTK6 254 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 FEM1BQ9UK73 627 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 FRMPD2Q68DX3 1309 aaPredicted RBP19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 MYPNQ86TC9 1320 aa19.18■□□□□ 0.66
TSPAN4-208ENST00000409531 PEX10O60683 326 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 CDKL5O76039 1030 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 SMARCA1P28370 1054 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 PRKCZQ05513 592 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 SCRN1Q12765 414 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 KCTD1Q719H9 257 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 RAET1EQ8TD07 263 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 ARMC5Q96C12 935 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 NUP88Q99567 741 aaPredicted RBP19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 GPCPD1Q9NPB8 672 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 GABRQQ9UN88 632 aa19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 BAZ2BQ9UIF8 2168 aaKnown RBP19.17■□□□□ 0.66
TSPAN4-208ENST00000409531 TMEM232C9JQI7 657 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 FLOT1O75955 427 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 GOLGA8HP0CJ92 632 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 CDC27P30260 824 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 DSG3P32926 999 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 ADD1P35611 737 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 FLT3LGP49771 235 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 CCNA1P78396 465 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 SLC9C1Q4G0N8 1177 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 BTNL9Q6UXG8 535 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 TMTC3Q6ZXV5 915 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 RASGRP2Q7LDG7 609 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 CCAR1Q8IX12 1150 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 STAG2Q8N3U4 1231 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 NECAB1Q8N987 351 aa19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 NCOA5Q9HCD5 579 aaKnown RBP19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 FAM217BQ9NTX9 383 aaPredicted RBP19.16■□□□□ 0.66
TSPAN4-208ENST00000409531 CNMDO75829 334 aa19.15■□□□□ 0.66
TSPAN4-208ENST00000409531 MAPK4P31152 587 aa19.15■□□□□ 0.66
TSPAN4-208ENST00000409531 IRF5Q13568 498 aa19.15■□□□□ 0.66
TSPAN4-208ENST00000409531 CCDC83Q8IWF9 413 aa19.15■□□□□ 0.66
TSPAN4-208ENST00000409531 PRPF38AQ8NAV1 312 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-208ENST00000409531 LLPHQ9BRT6 129 aaKnown RBP19.15■□□□□ 0.66
TSPAN4-208ENST00000409531 SPZ1Q9BXG8 430 aa19.15■□□□□ 0.66
TSPAN4-208ENST00000409531 BTBD7Q9P203 1132 aa19.15■□□□□ 0.66
TSPAN4-208ENST00000409531 ZSWIM8A7E2V4 1837 aa19.14■□□□□ 0.65
TSPAN4-208ENST00000409531 FDX1P10109 184 aa19.14■□□□□ 0.65
TSPAN4-208ENST00000409531 IFNAR1P17181 557 aa19.14■□□□□ 0.65
TSPAN4-208ENST00000409531 MB21D1Q8N884 522 aa19.14■□□□□ 0.65
TSPAN4-208ENST00000409531 SLF1Q9BQI6 1058 aa19.14■□□□□ 0.65
TSPAN4-208ENST00000409531 PORCNQ9H237 461 aa19.14■□□□□ 0.65
TSPAN4-208ENST00000409531 RBM27Q9P2N5 1060 aaKnown RBP19.14■□□□□ 0.65
TSPAN4-208ENST00000409531 GJD2Q9UKL4 321 aa19.14■□□□□ 0.65
TSPAN4-208ENST00000409531 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.14■□□□□ 0.65
TSPAN4-208ENST00000409531 RLFQ13129 1914 aa19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 PLEKHA8P1O95397 391 aa19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 HSP90AA1P07900 732 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 GRK4P32298 578 aa19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 CUL4AQ13619 759 aa19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 SYDE2Q5VT97 1194 aa19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 TTBK2Q6IQ55 1244 aa19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 TRIM22Q8IYM9 498 aa19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 SRBD1Q8N5C6 995 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 ADAMTS5Q9UNA0 930 aa19.13■□□□□ 0.65
TSPAN4-208ENST00000409531 SLC16A2P36021 539 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 AKAP17AQ02040 695 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 SSRP1Q08945 709 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 NTRK3Q16288 839 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 PXYLP1Q8TE99 480 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 SH3TC2Q8TF17 1288 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 ATG4CQ96DT6 458 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 INTS4Q96HW7 963 aaKnown RBP19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 ZNF333Q96JL9 665 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 UBA5Q9GZZ9 404 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 RIOX1Q9H6W3 641 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 FBXO28Q9NVF7 368 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 DAXXQ9UER7 740 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 PPP1R9AQ9ULJ8 1098 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 HTTP42858 3142 aa19.12■□□□□ 0.65
TSPAN4-208ENST00000409531 MGAMO43451 1857 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 CNTNAP5Q8WYK1 1306 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 ADCY3O60266 1144 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 HMGN5P82970 282 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 SAMD1Q6SPF0 538 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 GPR142Q7Z601 462 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 PLEKHH3Q7Z736 793 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 ADGRF4Q8IZF3 695 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 CCDC82Q8N4S0 544 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 SLAIN1Q8ND83 568 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 KIFC2Q96AC6 838 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 RRP36Q96EU6 259 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 RNF26Q9BY78 433 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 SEC63Q9UGP8 760 aaKnown RBP19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 PRR12Q9ULL5 1215 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 DOCK3Q8IZD9 2030 aa19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 COL11A1P12107 1806 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-208ENST00000409531 STK36Q9NRP7 1315 aa19.1■□□□□ 0.65
TSPAN4-208ENST00000409531 FUT2Q10981 343 aa19.1■□□□□ 0.65
TSPAN4-208ENST00000409531 ST3GAL1Q11201 340 aa19.1■□□□□ 0.65
TSPAN4-208ENST00000409531 CMTR1Q8N1G2 835 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-208ENST00000409531 NSUN7Q8NE18 718 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-208ENST00000409531 NUDT12Q9BQG2 462 aa19.1■□□□□ 0.65
TSPAN4-208ENST00000409531 SPATC1LQ9H0A9 340 aa19.1■□□□□ 0.65
TSPAN4-208ENST00000409531 CWC22Q9HCG8 908 aaKnown RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms