RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 CRAMP1Q96RY5 1269 aa18.99■□□□□ 0.63
NUP50-203ENST00000407019 SEC63Q9UGP8 760 aaKnown RBP18.99■□□□□ 0.63
NUP50-203ENST00000407019 DDX41Q9UJV9 622 aaKnown RBP18.99■□□□□ 0.63
NUP50-203ENST00000407019 KCNJ18B7U540 433 aa18.98■□□□□ 0.63
NUP50-203ENST00000407019 C6orf229H3BNL8 230 aa18.98■□□□□ 0.63
NUP50-203ENST00000407019 ONECUT3O60422 494 aaPredicted RBP18.98■□□□□ 0.63
NUP50-203ENST00000407019 GNA11P29992 359 aa18.98■□□□□ 0.63
NUP50-203ENST00000407019 COPB1P53618 953 aaKnown RBP18.98■□□□□ 0.63
NUP50-203ENST00000407019 KCNJ12Q14500 433 aa18.98■□□□□ 0.63
NUP50-203ENST00000407019 MTF1Q14872 753 aa18.98■□□□□ 0.63
NUP50-203ENST00000407019 TCP11X2Q5H9J9 407 aa18.98■□□□□ 0.63
NUP50-203ENST00000407019 SOGA3Q5TF21 947 aa18.98■□□□□ 0.63
NUP50-203ENST00000407019 MNS1Q8NEH6 495 aa18.98■□□□□ 0.63
NUP50-203ENST00000407019 SMCO2A6NFE2 343 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 GYPCP04921 128 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 OR52Z1P0C646 297 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 PRKCSHP14314 528 aaPredicted RBP18.97■□□□□ 0.63
NUP50-203ENST00000407019 CASP14P31944 242 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 NOVP48745 357 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 ADSSL1Q8N142 457 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 AK8Q96MA6 479 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 TAB2Q9NYJ8 693 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 H7C1D1 291 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 SEMA3FQ13275 785 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 RAD9BQ6WBX8 426 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 WDR24Q96S15 920 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 VPS16Q9H269 839 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 CUEDC2Q9H467 287 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 MAGEF1Q9HAY2 307 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 KBTBD4Q9NVX7 518 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 MAPK8IP1Q9UQF2 711 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 AFF2P51816 1311 aa18.97■□□□□ 0.63
NUP50-203ENST00000407019 DDR1Q08345 913 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 TRIM14Q14142 442 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 LETM2Q2VYF4 491 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 NEK8Q86SG6 692 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 CABP7Q86V35 215 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 MRPL44Q9H9J2 332 aaKnown RBP18.96■□□□□ 0.63
NUP50-203ENST00000407019 DAGLAQ9Y4D2 1042 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 ADGRG1Q9Y653 693 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 PLIN4Q96Q06 1357 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 MYH1P12882 1939 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 LRRC37AA6NMS7 1700 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 KLRC4O43908 158 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 CCNT1O60563 726 aaKnown RBP18.96■□□□□ 0.63
NUP50-203ENST00000407019 FECHP22830 423 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 FXR1P51114 621 aaKnown RBP eCLIP18.96■□□□□ 0.63
NUP50-203ENST00000407019 STIM1Q13586 685 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 SLC27A3Q5K4L6 730 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 TMC4Q7Z404 712 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 UBXN4Q92575 508 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 PIGSQ96S52 555 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 PLIN2Q99541 437 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 CARD6Q9BX69 1037 aa18.96■□□□□ 0.63
NUP50-203ENST00000407019 POLRMTO00411 1230 aaKnown RBP18.95■□□□□ 0.62
NUP50-203ENST00000407019 RHOBTB3O94955 611 aa18.95■□□□□ 0.62
NUP50-203ENST00000407019 H2AFXP16104 143 aaPredicted RBP18.95■□□□□ 0.62
NUP50-203ENST00000407019 GTF2IP78347 998 aa18.95■□□□□ 0.62
NUP50-203ENST00000407019 KIFC2Q96AC6 838 aa18.95■□□□□ 0.62
NUP50-203ENST00000407019 VAT1LQ9HCJ6 419 aa18.95■□□□□ 0.62
NUP50-203ENST00000407019 LTBP1Q14766 1721 aa18.95■□□□□ 0.62
NUP50-203ENST00000407019 ESYT2A0FGR8 921 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 USP17L5A8MUK1 530 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 PPEF1O14829 653 aaPredicted RBP18.94■□□□□ 0.62
NUP50-203ENST00000407019 TADA3O75528 432 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 ORC2Q13416 577 aaPredicted RBP18.94■□□□□ 0.62
NUP50-203ENST00000407019 ARHGAP29Q52LW3 1261 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 CREBRFQ8IUR6 639 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 FOCADQ5VW36 1801 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 KLRG2A4D1S0 409 aaPredicted RBP18.94■□□□□ 0.62
NUP50-203ENST00000407019 EFCAB8A8MWE9 144 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 hCG_1984214I3L0E3 225 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 PLCG1P19174 1290 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 MAP3K9P80192 1104 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 TXNRD1Q16881 649 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 ZNF713Q8N859 430 aaPredicted RBP18.94■□□□□ 0.62
NUP50-203ENST00000407019 RIOX1Q9H6W3 641 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 PRDM10Q9NQV6 1147 aa18.94■□□□□ 0.62
NUP50-203ENST00000407019 TRIM49BA6NDI0 452 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 PSMA7O14818 248 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 PDHBP11177 359 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 SP8Q8IXZ3 490 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 REXO1Q8N1G1 1221 aaKnown RBP18.93■□□□□ 0.62
NUP50-203ENST00000407019 GIMAP8Q8ND71 665 aaPredicted RBP18.93■□□□□ 0.62
NUP50-203ENST00000407019 CCDC47Q96A33 483 aaKnown RBP18.93■□□□□ 0.62
NUP50-203ENST00000407019 UBA5Q9GZZ9 404 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 THAP9Q9H5L6 903 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 TRPC5Q9UL62 973 aaPredicted RBP18.93■□□□□ 0.62
NUP50-203ENST00000407019 MRFAP1Q9Y605 127 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 PICALMQ13492 652 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 TMTC1Q8IUR5 882 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 TBCKQ8TEA7 893 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 LRRC15Q8TF66 581 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 NUP88Q99567 741 aaPredicted RBP18.93■□□□□ 0.62
NUP50-203ENST00000407019 COA1Q9GZY4 146 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 ABHD10Q9NUJ1 306 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 MTMR4Q9NYA4 1195 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 SUGT1Q9Y2Z0 365 aa18.93■□□□□ 0.62
NUP50-203ENST00000407019 FRMPD2Q68DX3 1309 aaPredicted RBP18.92■□□□□ 0.62
NUP50-203ENST00000407019 RIMBP2O15034 1052 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms