RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 CATIPQ7Z7H3 387 aa24.31■■□□□ 1.48
PDGFA-204ENST00000405692 IGDCC4Q8TDY8 1250 aa24.31■■□□□ 1.48
PDGFA-204ENST00000405692 NEK1Q96PY6 1258 aa24.31■■□□□ 1.48
PDGFA-204ENST00000405692 ACAD9Q9H845 621 aa24.31■■□□□ 1.48
PDGFA-204ENST00000405692 CCPG1Q9ULG6 757 aa24.31■■□□□ 1.48
PDGFA-204ENST00000405692 DIS3Q9Y2L1 958 aaKnown RBP24.31■■□□□ 1.48
PDGFA-204ENST00000405692 ZNF536O15090 1300 aa24.31■■□□□ 1.48
PDGFA-204ENST00000405692 HMGB1P09429 215 aaKnown RBP24.3■■□□□ 1.48
PDGFA-204ENST00000405692 GOLGA8HP0CJ92 632 aa24.3■■□□□ 1.48
PDGFA-204ENST00000405692 CCL14Q16627 93 aa24.3■■□□□ 1.48
PDGFA-204ENST00000405692 ANKRD35Q8N283 1001 aa24.3■■□□□ 1.48
PDGFA-204ENST00000405692 NPLOC4Q8TAT6 608 aa24.3■■□□□ 1.48
PDGFA-204ENST00000405692 AGBL1Q96MI9 1066 aa24.3■■□□□ 1.48
PDGFA-204ENST00000405692 UNC93B1Q9H1C4 597 aa24.3■■□□□ 1.48
PDGFA-204ENST00000405692 POTEFA5A3E0 1075 aa24.29■■□□□ 1.48
PDGFA-204ENST00000405692 COBLO75128 1261 aa24.29■■□□□ 1.48
PDGFA-204ENST00000405692 ALAS1P13196 640 aa24.29■■□□□ 1.48
PDGFA-204ENST00000405692 PRKAR2AP13861 404 aaKnown RBP24.29■■□□□ 1.48
PDGFA-204ENST00000405692 TRERF1Q96PN7 1200 aa24.29■■□□□ 1.48
PDGFA-204ENST00000405692 HOMER2Q9NSB8 354 aa24.29■■□□□ 1.48
PDGFA-204ENST00000405692 RNF146Q9NTX7 359 aa24.29■■□□□ 1.48
PDGFA-204ENST00000405692 CCDC69A6NI79 296 aa24.28■■□□□ 1.48
PDGFA-204ENST00000405692 HSPA4P34932 840 aa24.28■■□□□ 1.48
PDGFA-204ENST00000405692 LIFRP42702 1097 aa24.28■■□□□ 1.48
PDGFA-204ENST00000405692 SNAP25P60880 206 aa24.28■■□□□ 1.48
PDGFA-204ENST00000405692 MAP3K21Q5TCX8 1036 aa24.28■■□□□ 1.48
PDGFA-204ENST00000405692 NFXL1Q6ZNB6 911 aa24.28■■□□□ 1.48
PDGFA-204ENST00000405692 UBA5Q9GZZ9 404 aa24.28■■□□□ 1.48
PDGFA-204ENST00000405692 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.28■■□□□ 1.48
PDGFA-204ENST00000405692 WDR19Q8NEZ3 1342 aa24.28■■□□□ 1.48
PDGFA-204ENST00000405692 DHX16O60231 1041 aaKnown RBP24.27■■□□□ 1.48
PDGFA-204ENST00000405692 GJA8P48165 433 aa24.27■■□□□ 1.48
PDGFA-204ENST00000405692 CACNB2Q08289 660 aaPredicted RBP24.27■■□□□ 1.48
PDGFA-204ENST00000405692 TRIM32Q13049 653 aa24.27■■□□□ 1.48
PDGFA-204ENST00000405692 KCNB2Q92953 911 aa24.27■■□□□ 1.48
PDGFA-204ENST00000405692 MAML3Q96JK9 1138 aa24.27■■□□□ 1.48
PDGFA-204ENST00000405692 MAP3K14Q99558 947 aa24.27■■□□□ 1.48
PDGFA-204ENST00000405692 LY9Q9HBG7 655 aa24.27■■□□□ 1.48
PDGFA-204ENST00000405692 PAK6Q9NQU5 681 aaPredicted RBP24.27■■□□□ 1.48
PDGFA-204ENST00000405692 RBBP6Q7Z6E9 1792 aaKnown RBP24.26■■□□□ 1.47
PDGFA-204ENST00000405692 KLRF2D3W0D1 207 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 SH2B2O14492 632 aaPredicted RBP24.26■■□□□ 1.47
PDGFA-204ENST00000405692 DDAH1O94760 285 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 PGK2P07205 417 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 GRM4Q14833 912 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 ZNF792Q3KQV3 632 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 DHX32Q7L7V1 743 aaKnown RBP24.26■■□□□ 1.47
PDGFA-204ENST00000405692 RASEFQ8IZ41 740 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 ADGRF4Q8IZF3 695 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 MSL3Q8N5Y2 521 aaKnown RBP24.26■■□□□ 1.47
PDGFA-204ENST00000405692 U2AF1L4Q8WU68 220 aaKnown RBP24.26■■□□□ 1.47
PDGFA-204ENST00000405692 FLRT1Q9NZU1 646 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 HTTP42858 3142 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 PFASO15067 1338 aa24.26■■□□□ 1.47
PDGFA-204ENST00000405692 PALM3A6NDB9 673 aaPredicted RBP24.25■■□□□ 1.47
PDGFA-204ENST00000405692 SGPL1O95470 568 aa24.25■■□□□ 1.47
PDGFA-204ENST00000405692 CALM1P0DP23 149 aa24.25■■□□□ 1.47
PDGFA-204ENST00000405692 CALM2P0DP24 149 aa24.25■■□□□ 1.47
PDGFA-204ENST00000405692 CALM3P0DP25 149 aa24.25■■□□□ 1.47
PDGFA-204ENST00000405692 EN2P19622 333 aaPredicted RBP24.25■■□□□ 1.47
PDGFA-204ENST00000405692 KIF5BP33176 963 aa24.25■■□□□ 1.47
PDGFA-204ENST00000405692 MLLT1Q03111 559 aaPredicted RBP24.25■■□□□ 1.47
PDGFA-204ENST00000405692 TROAPQ12815 778 aa24.25■■□□□ 1.47
PDGFA-204ENST00000405692 MAD2L2Q9UI95 211 aa24.25■■□□□ 1.47
PDGFA-204ENST00000405692 DNAJC25-GNG10A0A024R161 153 aa24.24■■□□□ 1.47
PDGFA-204ENST00000405692 PSMA5P28066 241 aa24.24■■□□□ 1.47
PDGFA-204ENST00000405692 CYP2C19P33261 490 aa24.24■■□□□ 1.47
PDGFA-204ENST00000405692 CDC37Q16543 378 aaPredicted RBP24.24■■□□□ 1.47
PDGFA-204ENST00000405692 SYNE3Q6ZMZ3 975 aa24.24■■□□□ 1.47
PDGFA-204ENST00000405692 ZNF654Q8IZM8 581 aa24.24■■□□□ 1.47
PDGFA-204ENST00000405692 CTCFLQ8NI51 663 aaPredicted RBP24.24■■□□□ 1.47
PDGFA-204ENST00000405692 NUP133Q8WUM0 1156 aa24.24■■□□□ 1.47
PDGFA-204ENST00000405692 DEFB118Q96PH6 123 aa24.24■■□□□ 1.47
PDGFA-204ENST00000405692 SENP2Q9HC62 589 aa24.24■■□□□ 1.47
PDGFA-204ENST00000405692 IGHA2P01877 340 aa24.23■■□□□ 1.47
PDGFA-204ENST00000405692 TRAF1Q13077 416 aa24.23■■□□□ 1.47
PDGFA-204ENST00000405692 ADCK5Q3MIX3 580 aa24.23■■□□□ 1.47
PDGFA-204ENST00000405692 ZNF467Q7Z7K2 595 aaPredicted RBP24.23■■□□□ 1.47
PDGFA-204ENST00000405692 STAG2Q8N3U4 1231 aa24.23■■□□□ 1.47
PDGFA-204ENST00000405692 TINF2Q9BSI4 451 aa24.23■■□□□ 1.47
PDGFA-204ENST00000405692 VAT1LQ9HCJ6 419 aa24.23■■□□□ 1.47
PDGFA-204ENST00000405692 NRBP1Q9UHY1 535 aa24.23■■□□□ 1.47
PDGFA-204ENST00000405692 SLC12A7Q9Y666 1083 aa24.23■■□□□ 1.47
PDGFA-204ENST00000405692 POTEB2H3BUK9 544 aa24.22■■□□□ 1.47
PDGFA-204ENST00000405692 MSCO60682 206 aa24.22■■□□□ 1.47
PDGFA-204ENST00000405692 TFRCP02786 760 aaKnown RBP24.22■■□□□ 1.47
PDGFA-204ENST00000405692 GNAQP50148 359 aa24.22■■□□□ 1.47
PDGFA-204ENST00000405692 EXOSC10Q01780 885 aaKnown RBP24.22■■□□□ 1.47
PDGFA-204ENST00000405692 SGMS1Q86VZ5 419 aa24.22■■□□□ 1.47
PDGFA-204ENST00000405692 LZTS2Q9BRK4 669 aa24.22■■□□□ 1.47
PDGFA-204ENST00000405692 MAF1Q9H063 256 aa24.22■■□□□ 1.47
PDGFA-204ENST00000405692 CPVLQ9H3G5 476 aa24.22■■□□□ 1.47
PDGFA-204ENST00000405692 JMJD4Q9H9V9 463 aa24.22■■□□□ 1.47
PDGFA-204ENST00000405692 A1CFQ9NQ94 594 aaKnown RBP24.22■■□□□ 1.47
PDGFA-204ENST00000405692 SNX14Q9Y5W7 946 aa24.22■■□□□ 1.47
PDGFA-204ENST00000405692 FGD1P98174 961 aa24.21■■□□□ 1.47
PDGFA-204ENST00000405692 MUM1L1Q5H9M0 696 aa24.21■■□□□ 1.47
PDGFA-204ENST00000405692 BLOC1S2Q6QNY1 142 aa24.21■■□□□ 1.47
PDGFA-204ENST00000405692 NSMFQ6X4W1 530 aa24.21■■□□□ 1.47
PDGFA-204ENST00000405692 JAKMIP1Q96N16 626 aaKnown RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms