RNA–Protein interactions for RNA: ENST00000400345.7

NEDD4L-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEDD4L, Length 3,647 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-205ENST00000400345 SMIM23A6NLE4 172 aa16.4■□□□□ 0.22
NEDD4L-205ENST00000400345 WHAMMP3Q1A5X7 153 aa16.4■□□□□ 0.22
NEDD4L-205ENST00000400345 IQCEQ6IPM2 695 aa16.4■□□□□ 0.22
NEDD4L-205ENST00000400345 USP21Q9UK80 565 aa16.4■□□□□ 0.22
NEDD4L-205ENST00000400345 NCK2O43639 380 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 MOCS3O95396 460 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 PRDX5P30044 214 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 CKAP4Q07065 602 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 BLIDQ8IZY5 108 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 PROCA1Q8NCQ7 364 aaPredicted RBP16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 BCAS4Q8TDM0 211 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 EXOC4Q96A65 974 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 ALS2CR12Q96Q35 445 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 MLXIPQ9HAP2 919 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 FAM208AQ9UK61 1670 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 EBAG9O00559 213 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 GTPBP6O43824 516 aaPredicted RBP16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 PNMA1Q8ND90 353 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 TRIM31Q9BZY9 425 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 MAGEA1P43355 309 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 SETQ01105 290 aaPredicted RBP16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 CELF1Q92879 486 aaKnown RBP16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 CCDC113Q9H0I3 377 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 ANKZF1Q9H8Y5 726 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 ZNF652Q9Y2D9 606 aa16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
NEDD4L-205ENST00000400345 RAPGEF1Q13905 1077 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 C3orf67Q6ZVT6 689 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 TMC4Q7Z404 712 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 CABP7Q86V35 215 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 TMEM139Q8IV31 216 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 SRBD1Q8N5C6 995 aaKnown RBP16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 KIFC2Q96AC6 838 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 CNOT6LQ96LI5 555 aaKnown RBP16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 GOLGA6L10A6NI86 522 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 TRAF5O00463 557 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 NDUFAB1O14561 156 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 HSF2BPO75031 334 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 GGCXP38435 758 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 GNGT1P63211 74 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 STAG2Q8N3U4 1231 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 TGFBRAP1Q8WUH2 860 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 TAF4BQ92750 862 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 LRRIQ3A6PVS8 624 aaPredicted RBP16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 RIMBP2O15034 1052 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 DIXDC1Q155Q3 683 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 TAX1BP1Q86VP1 789 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 MED15Q96RN5 788 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 GOPCQ9HD26 462 aa16.38■□□□□ 0.21
NEDD4L-205ENST00000400345 ZNF18P17022 549 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 RASSF7Q02833 373 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 C8orf74Q6P047 294 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 GPCPD1Q9NPB8 672 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 FCER1AP12319 257 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 CALML3P27482 149 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 BEND6Q5SZJ8 279 aaPredicted RBP16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.212e-7■■■■■ 126.4
NEDD4L-205ENST00000400345 TOPAZ1Q8N9V7 1692 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 C6orf229H3BNL8 230 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 PLEKP08567 350 aaPredicted RBP16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 KCNJ6P48051 423 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 RASGRP2Q7LDG7 609 aa16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 RBM28Q9NW13 759 aaKnown RBP16.37■□□□□ 0.21
NEDD4L-205ENST00000400345 OVOS2A0A0G2JMS6 1433 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 PPP1R3GB7ZBB8 358 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 KLRK1P26718 216 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 STAG1Q8WVM7 1258 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 HAUS4Q9H6D7 363 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 NHEJ1Q9H9Q4 299 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 TACC3Q9Y6A5 838 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 COL5A2P05997 1499 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 CALM1P0DP23 149 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 CALM2P0DP24 149 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 CALM3P0DP25 149 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 IL6STP40189 918 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 ADAT2Q7Z6V5 191 aaKnown RBP16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 EHBP1Q8NDI1 1231 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 FRMPD2Q68DX3 1309 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 HGSO14964 777 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 EZH2Q15910 746 aaKnown RBP16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 RSRC2Q7L4I2 434 aaKnown RBP16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 LACRTQ9GZZ8 138 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 EHD4Q9H223 541 aa16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 PACSIN2Q9UNF0 486 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-205ENST00000400345 XDHP47989 1333 aa16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 CHD2O14647 1828 aaKnown RBP16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 FTCDO95954 541 aa16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 CSF1RP07333 972 aa16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 PLCG1P19174 1290 aa16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 TBC1D9BQ66K14 1250 aa16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 NFRKBQ6P4R8 1299 aa16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 FAM71BQ8TC56 605 aa16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 MCM3P25205 808 aa16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 PMS1P54277 932 aaKnown RBP16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 ZNF658Q5TYW1 1059 aaPredicted RBP16.35■□□□□ 0.21
NEDD4L-205ENST00000400345 MB21D1Q8N884 522 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms