RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GUCA1BQ9UMX6 200 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 SCN7AQ01118 1682 aa16.35■□□□□ 0.21
MSH5-201ENST00000375703 A0A1W2PQC6 194 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 LGALS16A8MUM7 142 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 PSMA7O14818 248 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 KLRC4O43908 158 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 RHOXF2BP0C7M4 288 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 ZNF507Q8TCN5 953 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 RHOXF2Q9BQY4 288 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 KBTBD4Q9NVX7 518 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 CALCOCO1Q9P1Z2 691 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 WNK3Q9BYP7 1800 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 RHOBTB3O94955 611 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 ST5P78524 1137 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 HDXQ7Z353 690 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 BARHL2Q9NY43 387 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 CAPN11Q9UMQ6 739 aa16.34■□□□□ 0.21
MSH5-201ENST00000375703 CYTH3O43739 400 aa16.33■□□□□ 0.21
MSH5-201ENST00000375703 LDHBP07195 334 aaKnown RBP16.33■□□□□ 0.21
MSH5-201ENST00000375703 NT5C2P49902 561 aa16.33■□□□□ 0.21
MSH5-201ENST00000375703 TPTE2Q6XPS3 522 aa16.33■□□□□ 0.21
MSH5-201ENST00000375703 AMOTL1Q8IY63 956 aa16.33■□□□□ 0.21
MSH5-201ENST00000375703 DAGLBQ8NCG7 672 aa16.33■□□□□ 0.21
MSH5-201ENST00000375703 GIMAP8Q8ND71 665 aaPredicted RBP16.33■□□□□ 0.21
MSH5-201ENST00000375703 SH3RF3Q8TEJ3 882 aaPredicted RBP16.33■□□□□ 0.21
MSH5-201ENST00000375703 REXO2Q9Y3B8 237 aaKnown RBP16.33■□□□□ 0.21
MSH5-201ENST00000375703 SPATA31A5Q5VU36 1347 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 SPATA31A7Q8IWB4 1347 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 STXBP3O00186 592 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 LAD1O00515 517 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 GPS2Q13227 327 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 MCM6Q14566 821 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 SLC35G1Q2M3R5 365 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 DNAJC7Q99615 494 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 ABCB6Q9NP58 842 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 SRP68Q9UHB9 627 aaKnown RBP16.33■□□□□ 0.2
MSH5-201ENST00000375703 STX8Q9UNK0 236 aa16.33■□□□□ 0.2
MSH5-201ENST00000375703 COL22A1Q8NFW1 1626 aaPredicted RBP16.33■□□□□ 0.2
MSH5-201ENST00000375703 DNM2P50570 870 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 SEMA3FQ13275 785 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 TCP11L1Q9NUJ3 509 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 TRIM10Q9UDY6 481 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 NARFQ9UHQ1 456 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 PRPHP41219 470 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 DHTKD1Q96HY7 919 aaPredicted RBP16.32■□□□□ 0.2
MSH5-201ENST00000375703 TMEM47Q9BQJ4 181 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 L1RE1Q9UN81 338 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 MYH8P13535 1937 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 PALM3A6NDB9 673 aaPredicted RBP16.32■□□□□ 0.2
MSH5-201ENST00000375703 RGL2O15211 777 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 BAG3O95817 575 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 AMPD2Q01433 879 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 TTI2Q6NXR4 508 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 WDR59Q6PJI9 974 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 BARGINQ6ZT62 677 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 TXLNBQ8N3L3 684 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 CSGALNACT2Q8N6G5 542 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 WDR66Q8TBY9 1149 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 NOC3LQ8WTT2 800 aaKnown RBP16.32■□□□□ 0.2
MSH5-201ENST00000375703 TGFBRAP1Q8WUH2 860 aa16.32■□□□□ 0.2
MSH5-201ENST00000375703 H3BQF6 201 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 ZPR1O75312 459 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 GOLGA8HP0CJ92 632 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 TM4SF1P30408 202 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 HNRNPH2P55795 449 aaKnown RBP16.31■□□□□ 0.2
MSH5-201ENST00000375703 NCAPH2Q6IBW4 605 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 CABP7Q86V35 215 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 CCDC47Q96A33 483 aaKnown RBP16.31■□□□□ 0.2
MSH5-201ENST00000375703 TUBGCP2Q9BSJ2 902 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 CUEDC2Q9H467 287 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 B4DLN1 442 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 TUBBP07437 444 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 GYS2P54840 703 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 VSNL1P62760 191 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 SLC44A5Q8NCS7 719 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 NEK11Q8NG66 645 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 LRRC15Q8TF66 581 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 DUSP9Q99956 384 aaKnown RBP16.31■□□□□ 0.2
MSH5-201ENST00000375703 LZTS2Q9BRK4 669 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 PDE11AQ9HCR9 933 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 EXOC1Q9NV70 894 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 ANKIB1Q9P2G1 1089 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 ADAM21Q9UKJ8 722 aa16.31■□□□□ 0.2
MSH5-201ENST00000375703 CNTNAP4Q9C0A0 1308 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 KLRF2D3W0D1 207 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 SRGNP10124 158 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 PLCG1P19174 1290 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 KRT83P78385 493 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 GSTO1P78417 241 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 TBC1D8BQ0IIM8 1120 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 DIXDC1Q155Q3 683 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 CCDC122Q5T0U0 273 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 NOA1Q8NC60 698 aaKnown RBP16.3■□□□□ 0.2
MSH5-201ENST00000375703 EEF2KMTQ96G04 330 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 AK8Q96MA6 479 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 GBP3Q9H0R5 595 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 KIAA1551Q9HCM1 1747 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 LAMB1P07942 1786 aa16.3■□□□□ 0.2
MSH5-201ENST00000375703 NUTM2BA6NNL0 878 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms