RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 OSBPL3Q9H4L5 887 aa16.83■□□□□ 0.28
NELFE-201ENST00000375425 HOMER2Q9NSB8 354 aa16.83■□□□□ 0.28
NELFE-201ENST00000375425 MTMR7Q9Y216 660 aa16.83■□□□□ 0.28
NELFE-201ENST00000375425 COL6A3P12111 3177 aa16.83■□□□□ 0.28
NELFE-201ENST00000375425 CCDC171Q6TFL3 1326 aa16.82■□□□□ 0.28
NELFE-201ENST00000375425 HAND2P61296 217 aa16.82■□□□□ 0.28
NELFE-201ENST00000375425 LBHD1Q9BQE6 289 aaPredicted RBP16.82■□□□□ 0.28
NELFE-201ENST00000375425 PRKAG2Q9UGJ0 569 aa16.82■□□□□ 0.28
NELFE-201ENST00000375425 FAM184BQ9ULE4 1060 aa16.82■□□□□ 0.28
NELFE-201ENST00000375425 FRMPD3Q5JV73 1810 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 ZNF536O15090 1300 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 SNAP25P60880 206 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 SNX17Q15036 470 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 LRIT3Q3SXY7 679 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 RASGRP2Q7LDG7 609 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 LENG1Q96BZ8 264 aaPredicted RBP16.81■□□□□ 0.28
NELFE-201ENST00000375425 FGD4Q96M96 766 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 ACAD9Q9H845 621 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 ZHX1Q9UKY1 873 aaPredicted RBP16.81■□□□□ 0.28
NELFE-201ENST00000375425 PRR12Q9ULL5 1215 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 PHF24Q9UPV7 400 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 SMCHD1A6NHR9 2005 aa16.81■□□□□ 0.28
NELFE-201ENST00000375425 CNTN2Q02246 1040 aa16.8■□□□□ 0.28
NELFE-201ENST00000375425 TRIM60Q495X7 471 aa16.8■□□□□ 0.28
NELFE-201ENST00000375425 C1orf53Q5VUE5 145 aa16.8■□□□□ 0.28
NELFE-201ENST00000375425 CCDC174Q6PII3 467 aa16.8■□□□□ 0.28
NELFE-201ENST00000375425 TRERF1Q96PN7 1200 aa16.8■□□□□ 0.28
NELFE-201ENST00000375425 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
NELFE-201ENST00000375425 TCP11L1Q9NUJ3 509 aa16.8■□□□□ 0.28
NELFE-201ENST00000375425 SUPT16HQ9Y5B9 1047 aaKnown RBP16.8■□□□□ 0.28
NELFE-201ENST00000375425 ZMYM6O95789 1325 aa16.8■□□□□ 0.28
NELFE-201ENST00000375425 POTEB2H3BUK9 544 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 ADAMTS4O75173 837 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 ALAS1P13196 640 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 MFAP1P55081 439 aaKnown RBP16.79■□□□□ 0.28
NELFE-201ENST00000375425 TKFCQ3LXA3 575 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 AKNAD1Q5T1N1 836 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 TTBK2Q6IQ55 1244 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 MFSD6Q6ZSS7 791 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 DCAF4Q8WV16 495 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 ABHD16BQ9H3Z7 469 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 RNF146Q9NTX7 359 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.79■□□□□ 0.28
NELFE-201ENST00000375425 TOP1P11387 765 aaKnown RBP16.79■□□□□ 0.28
NELFE-201ENST00000375425 CCDC96Q2M329 555 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
NELFE-201ENST00000375425 ARMCX2Q7L311 632 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 CCDC144CPQ8IYA2 1237 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 FAM133AQ8N9E0 248 aa16.79■□□□□ 0.28
NELFE-201ENST00000375425 A1CFQ9NQ94 594 aaKnown RBP16.79■□□□□ 0.28
NELFE-201ENST00000375425 PRDM5Q9NQX1 630 aaPredicted RBP16.79■□□□□ 0.28
NELFE-201ENST00000375425 DUSP11O75319 330 aaKnown RBP16.78■□□□□ 0.28
NELFE-201ENST00000375425 PCP11498 1178 aaKnown RBP16.78■□□□□ 0.28
NELFE-201ENST00000375425 SLC16A2P36021 539 aa16.78■□□□□ 0.28
NELFE-201ENST00000375425 TLE2Q04725 743 aa16.78■□□□□ 0.28
NELFE-201ENST00000375425 CCDC144BQ3MJ40 725 aa16.78■□□□□ 0.28
NELFE-201ENST00000375425 KLHDC9Q8NEP7 349 aa16.78■□□□□ 0.28
NELFE-201ENST00000375425 TSEN34Q9BSV6 310 aaKnown RBP16.78■□□□□ 0.28
NELFE-201ENST00000375425 SYNRGQ9UMZ2 1314 aa16.77■□□□□ 0.28
NELFE-201ENST00000375425 PLXNA1Q9UIW2 1896 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 A0A1W2PQ45 241 aaPredicted RBP16.77■□□□□ 0.27
NELFE-201ENST00000375425 A0A1W2PQY0 241 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 TRIM43BA6NCK2 446 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 ZNF213O14771 459 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 ACLYP53396 1101 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 KCNA10Q16322 511 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 MUM1L1Q5H9M0 696 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 GPR153Q6NV75 609 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 BTNL9Q6UXG8 535 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 SH3RF1Q7Z6J0 888 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 TBC1D10CQ8IV04 446 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 TRIM43Q96BQ3 446 aaPredicted RBP16.77■□□□□ 0.27
NELFE-201ENST00000375425 TTC14Q96N46 770 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 GPCPD1Q9NPB8 672 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 DIAPH3Q9NSV4 1193 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 CCPG1Q9ULG6 757 aa16.77■□□□□ 0.27
NELFE-201ENST00000375425 FRMPD2Q68DX3 1309 aaPredicted RBP16.76■□□□□ 0.27
NELFE-201ENST00000375425 SOWAHBA6NEL2 793 aa16.76■□□□□ 0.27
NELFE-201ENST00000375425 ADCY6O43306 1168 aa16.76■□□□□ 0.27
NELFE-201ENST00000375425 ICAM1P05362 532 aa16.76■□□□□ 0.27
NELFE-201ENST00000375425 IRX5P78411 483 aaPredicted RBP16.76■□□□□ 0.27
NELFE-201ENST00000375425 CCSAPQ6IQ19 270 aaPredicted RBP16.76■□□□□ 0.27
NELFE-201ENST00000375425 NUP133Q8WUM0 1156 aa16.76■□□□□ 0.27
NELFE-201ENST00000375425 BADQ92934 168 aa16.76■□□□□ 0.27
NELFE-201ENST00000375425 KATNBL1Q9H079 304 aa16.76■□□□□ 0.27
NELFE-201ENST00000375425 RANBP17Q9H2T7 1088 aaKnown RBP16.76■□□□□ 0.27
NELFE-201ENST00000375425 RNF41Q9H4P4 317 aaPredicted RBP16.76■□□□□ 0.27
NELFE-201ENST00000375425 STARD7Q9NQZ5 370 aa16.76■□□□□ 0.27
NELFE-201ENST00000375425 PDLIM7Q9NR12 457 aa16.76■□□□□ 0.27
NELFE-201ENST00000375425 CYP39A1Q9NYL5 469 aa16.76■□□□□ 0.27
NELFE-201ENST00000375425 A0A0C4DFX4 3053 aa16.75■□□□□ 0.27
NELFE-201ENST00000375425 MYADML2A6NDP7 307 aa16.75■□□□□ 0.27
NELFE-201ENST00000375425 MOXD2PA6NHM9 499 aa16.75■□□□□ 0.27
NELFE-201ENST00000375425 ASB14A6NK59 587 aa16.75■□□□□ 0.27
NELFE-201ENST00000375425 HIP1O00291 1037 aa16.75■□□□□ 0.27
NELFE-201ENST00000375425 C6orf222P0C671 652 aaPredicted RBP16.75■□□□□ 0.27
NELFE-201ENST00000375425 PDHBP11177 359 aa16.75■□□□□ 0.27
NELFE-201ENST00000375425 SYDE2Q5VT97 1194 aa16.75■□□□□ 0.27
NELFE-201ENST00000375425 ESR2Q92731 530 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms