RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 WWC2Q6AWC2 1192 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 KLHL10Q6JEL2 608 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 C16orf86Q6ZW13 317 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 USP49Q70CQ1 688 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 USP17L1Q7RTZ2 530 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 SMAP1Q8IYB5 467 aaPredicted RBP13.8□□□□□ -0.2
UBR4-203ENST00000375225 MNS1Q8NEH6 495 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 NOC3LQ8WTT2 800 aaKnown RBP13.8□□□□□ -0.2
UBR4-203ENST00000375225 TSC1Q92574 1164 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 SHISA4Q96DD7 197 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 RRP36Q96EU6 259 aaKnown RBP13.8□□□□□ -0.2
UBR4-203ENST00000375225 ARGLU1Q9NWB6 273 aaPredicted RBP13.8□□□□□ -0.2
UBR4-203ENST00000375225 MAD2L2Q9UI95 211 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 TTF2Q9UNY4 1162 aaKnown RBP13.8□□□□□ -0.2
UBR4-203ENST00000375225 FOCADQ5VW36 1801 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 SCN9AQ15858 1988 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
UBR4-203ENST00000375225 TMEM232C9JQI7 657 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 CCDC175P0C221 793 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 CASQ1P31415 396 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 UBA7P41226 1012 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 PTGER2P43116 358 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 TUBB2AQ13885 445 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 E2F4Q16254 413 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 CDKAL1Q5VV42 579 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 RRAGBQ5VZM2 374 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 HEATR3Q7Z4Q2 680 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 TRMT44Q8IYL2 757 aaKnown RBP13.8□□□□□ -0.2
UBR4-203ENST00000375225 LARGE2Q8N3Y3 721 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 NEDD1Q8NHV4 660 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 TUBB2BQ9BVA1 445 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 SPON1Q9HCB6 807 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 OGFRQ9NZT2 677 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 DNAI1Q9UI46 699 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 STX8Q9UNK0 236 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 PPP2R2CQ9Y2T4 447 aa13.8□□□□□ -0.2
UBR4-203ENST00000375225 ARFGEF1Q9Y6D6 1849 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 H7C1D1 291 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 SMIM22K7EJ46 135 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 RPN1P04843 607 aaKnown RBP13.79□□□□□ -0.2
UBR4-203ENST00000375225 TUBB4BP68371 445 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 AMPD3Q01432 767 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 KCNB1Q14721 858 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 PDXDC2PQ6P474 469 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 CERS5Q8N5B7 392 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 IGSF22Q8N9C0 903 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 TEKT1Q969V4 418 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 TMEM47Q9BQJ4 181 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 CCSER1Q9C0I3 900 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 DISC1Q9NRI5 854 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 IL17RBQ9NRM6 502 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 SAMSN1Q9NSI8 373 aaKnown RBP13.79□□□□□ -0.2
UBR4-203ENST00000375225 ZNF215Q9UL58 517 aaPredicted RBP13.79□□□□□ -0.2
UBR4-203ENST00000375225 CTNND2Q9UQB3 1225 aa13.79□□□□□ -0.2
UBR4-203ENST00000375225 MYO3BQ8WXR4 1341 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 A0A087X0B3 334 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 PPP1R3GB7ZBB8 358 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 KLRF2D3W0D1 207 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 F8W031 263 aaPredicted RBP13.78□□□□□ -0.2
UBR4-203ENST00000375225 STXBP3O00186 592 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 RASA1P20936 1047 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 CDK8P49336 464 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 NAPAP54920 295 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 NONOQ15233 471 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBR4-203ENST00000375225 DACT2Q5SW24 774 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 HHIPL2Q6UWX4 724 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 MAPKAPK5Q8IW41 473 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 NIM1KQ8IY84 436 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 TC2NQ8N9U0 490 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 TAOK3Q9H2K8 898 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 INTS13Q9NVM9 706 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 MAGEC2Q9UBF1 373 aaPredicted RBP13.78□□□□□ -0.2
UBR4-203ENST00000375225 ADD3Q9UEY8 706 aaKnown RBP13.78□□□□□ -0.2
UBR4-203ENST00000375225 LIMA1Q9UHB6 759 aaKnown RBP13.78□□□□□ -0.2
UBR4-203ENST00000375225 PCDHA6Q9UN73 950 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 DAGLAQ9Y4D2 1042 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 PCDHA8Q9Y5H6 950 aa13.78□□□□□ -0.2
UBR4-203ENST00000375225 MYH1P12882 1939 aa13.77□□□□□ -0.2
UBR4-203ENST00000375225 PSMA7O14818 248 aa13.77□□□□□ -0.21
UBR4-203ENST00000375225 HDLBPQ00341 1268 aaKnown RBP13.77□□□□□ -0.21
UBR4-203ENST00000375225 FAM114A1Q8IWE2 563 aa13.77□□□□□ -0.21
UBR4-203ENST00000375225 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
UBR4-203ENST00000375225 DYNLL2Q96FJ2 89 aa13.77□□□□□ -0.21
UBR4-203ENST00000375225 MRIQ9BWK5 157 aa13.77□□□□□ -0.21
UBR4-203ENST00000375225 RAB34Q9BZG1 259 aa13.77□□□□□ -0.21
UBR4-203ENST00000375225 ZMYND12Q9H0C1 365 aa13.77□□□□□ -0.21
UBR4-203ENST00000375225 ZNF277Q9NRM2 450 aaPredicted RBP13.77□□□□□ -0.21
UBR4-203ENST00000375225 DDX60LQ5H9U9 1706 aaKnown RBP13.77□□□□□ -0.21
UBR4-203ENST00000375225 ESYT2A0FGR8 921 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 BICDL2A1A5D9 508 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 M0R2N6 131 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 N4BP3O15049 544 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 TSR1Q2NL82 804 aaKnown RBP13.76□□□□□ -0.21
UBR4-203ENST00000375225 ASPRV1Q53RT3 343 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 TMTC1Q8IUR5 882 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 REXO1L1PQ8IX06 675 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 C4orf32Q8N8J7 132 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 NELFBQ8WX92 580 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 UBXN4Q92575 508 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms