RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ABHD16BQ9H3Z7 469 aa16.44■□□□□ 0.22
CXCL12-202ENST00000374426 FBXO40Q9UH90 709 aa16.44■□□□□ 0.22
CXCL12-202ENST00000374426 TBX21Q9UL17 535 aa16.44■□□□□ 0.22
CXCL12-202ENST00000374426 MCM3APO60318 1980 aa16.44■□□□□ 0.22
CXCL12-202ENST00000374426 TMEM265A0A087WTH1 108 aa16.43■□□□□ 0.22
CXCL12-202ENST00000374426 C6orf222P0C671 652 aaPredicted RBP16.43■□□□□ 0.22
CXCL12-202ENST00000374426 CDK7P50613 346 aa16.43■□□□□ 0.22
CXCL12-202ENST00000374426 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
CXCL12-202ENST00000374426 ARMCX2Q7L311 632 aa16.43■□□□□ 0.22
CXCL12-202ENST00000374426 NEDD1Q8NHV4 660 aa16.43■□□□□ 0.22
CXCL12-202ENST00000374426 GLT1D1Q96MS3 346 aa16.43■□□□□ 0.22
CXCL12-202ENST00000374426 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
CXCL12-202ENST00000374426 KATNBL1Q9H079 304 aa16.43■□□□□ 0.22
CXCL12-202ENST00000374426 UPF3AQ9H1J1 476 aaKnown RBP16.43■□□□□ 0.22
CXCL12-202ENST00000374426 ELP1O95163 1332 aa16.43■□□□□ 0.22
CXCL12-202ENST00000374426 TIMP1P01033 207 aa16.42■□□□□ 0.22
CXCL12-202ENST00000374426 ASGR1P07306 291 aa16.42■□□□□ 0.22
CXCL12-202ENST00000374426 BMP3P12645 472 aa16.42■□□□□ 0.22
CXCL12-202ENST00000374426 GJA9P57773 515 aa16.42■□□□□ 0.22
CXCL12-202ENST00000374426 CNTN2Q02246 1040 aa16.42■□□□□ 0.22
CXCL12-202ENST00000374426 SLFN13Q68D06 897 aa16.42■□□□□ 0.22
CXCL12-202ENST00000374426 CCDC144CPQ8IYA2 1237 aa16.42■□□□□ 0.22
CXCL12-202ENST00000374426 HOMER2Q9NSB8 354 aa16.42■□□□□ 0.22
CXCL12-202ENST00000374426 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 CTAGE5O15320 804 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 FOSL2P15408 326 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 PCSK9Q8NBP7 692 aaKnown RBP16.41■□□□□ 0.22
CXCL12-202ENST00000374426 PI4K2BQ8TCG2 481 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.41■□□□□ 0.22
CXCL12-202ENST00000374426 NACAP1Q9BZK3 213 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 SPC25Q9HBM1 224 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 ZNF536O15090 1300 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 MROH7Q68CQ1 1323 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
CXCL12-202ENST00000374426 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.4■□□□□ 0.22
CXCL12-202ENST00000374426 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.4■□□□□ 0.22
CXCL12-202ENST00000374426 FDX1P10109 184 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 DNAJB2P25686 324 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 STAT2P52630 851 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 TFAP4Q01664 338 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 PDE4BQ07343 736 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 PPARAQ07869 468 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 LRRFIP1Q32MZ4 808 aaKnown RBP16.4■□□□□ 0.22
CXCL12-202ENST00000374426 GNASQ5JWF2 1037 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 MFSD5Q6N075 450 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 C16orf59Q7L2K0 433 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 FAM133AQ8N9E0 248 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 OTUD7AQ8TE49 926 aaPredicted RBP16.4■□□□□ 0.22
CXCL12-202ENST00000374426 GMCL1Q96IK5 515 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 AGBL1Q96MI9 1066 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 ACAD9Q9H845 621 aa16.4■□□□□ 0.22
CXCL12-202ENST00000374426 A1CFQ9NQ94 594 aaKnown RBP16.4■□□□□ 0.22
CXCL12-202ENST00000374426 A0A0U1RQG5 324 aaPredicted RBP16.39■□□□□ 0.21
CXCL12-202ENST00000374426 ARVCFO00192 962 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 FOXP2O15409 715 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 NKX3-2P78367 333 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 GRIN2CQ14957 1233 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 ZMYM1Q5SVZ6 1142 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 FAM126BQ8IXS8 530 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 VTI1AQ96AJ9 217 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 CHMP4CQ96CF2 233 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 NAPBQ9H115 298 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 RNF146Q9NTX7 359 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
CXCL12-202ENST00000374426 CHD7Q9P2D1 2997 aa16.39■□□□□ 0.21
CXCL12-202ENST00000374426 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.38■□□□□ 0.21
CXCL12-202ENST00000374426 SOWAHBA6NEL2 793 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 ERC2O15083 957 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 SLC3A2P08195 630 aaKnown RBP16.38■□□□□ 0.21
CXCL12-202ENST00000374426 CSF2RAP15509 400 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 MCCP23508 829 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 SLC1A4P43007 532 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 BEX3Q00994 111 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 TMEM240Q5SV17 173 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 FAM160B2Q86V87 743 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 CHURC1Q8WUH1 139 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 STAG1Q8WVM7 1258 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 FSD1Q9BTV5 496 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.38■□□□□ 0.21
CXCL12-202ENST00000374426 PCDHB15Q9Y5E8 787 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 ASTN1O14525 1302 aa16.38■□□□□ 0.21
CXCL12-202ENST00000374426 PLA2G6O60733 806 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 TNFAIP2Q03169 654 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 IKQ13123 557 aaPredicted RBP16.37■□□□□ 0.21
CXCL12-202ENST00000374426 PPIGQ13427 754 aaKnown RBP eCLIP16.37■□□□□ 0.21
CXCL12-202ENST00000374426 RASIP1Q5U651 963 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 RASGRP2Q7LDG7 609 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 TIFAQ96CG3 184 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 TRERF1Q96PN7 1200 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 PPP1R12CQ9BZL4 782 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 ZNF576Q9H609 170 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 INCENPQ9NQS7 918 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 IL17RBQ9NRM6 502 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 GNEQ9Y223 722 aaKnown RBP16.37■□□□□ 0.21
CXCL12-202ENST00000374426 DDX49Q9Y6V7 483 aaKnown RBP16.37■□□□□ 0.21
CXCL12-202ENST00000374426 MYO9BQ13459 2157 aa16.37■□□□□ 0.21
CXCL12-202ENST00000374426 NMT2O60551 498 aa16.36■□□□□ 0.21
CXCL12-202ENST00000374426 CD4P01730 458 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms