RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 COL1A1P02452 1464 aaPredicted RBP20.24■□□□□ 0.83
HNF4A-203ENST00000372920 NHEJ1Q9H9Q4 299 aaPredicted RBP20.24■□□□□ 0.83
HNF4A-203ENST00000372920 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.24■□□□□ 0.837e-6■■□□□ 13
HNF4A-203ENST00000372920 DUSP10Q9Y6W6 482 aa20.24■□□□□ 0.83
HNF4A-203ENST00000372920 RASSF10A6NK89 507 aa20.24■□□□□ 0.83
HNF4A-203ENST00000372920 PSMA7O14818 248 aa20.24■□□□□ 0.83
HNF4A-203ENST00000372920 TRIM21P19474 475 aaKnown RBP20.24■□□□□ 0.83
HNF4A-203ENST00000372920 GGCXP38435 758 aa20.24■□□□□ 0.83
HNF4A-203ENST00000372920 KLK7P49862 253 aa20.24■□□□□ 0.83
HNF4A-203ENST00000372920 EIF5P55010 431 aaKnown RBP20.24■□□□□ 0.83
HNF4A-203ENST00000372920 TTI2Q6NXR4 508 aa20.24■□□□□ 0.83
HNF4A-203ENST00000372920 ZNF384Q8TF68 577 aa20.24■□□□□ 0.83
HNF4A-203ENST00000372920 MYH13Q9UKX3 1938 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 BLIDQ8IZY5 108 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 RASGRP4Q8TDF6 673 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 EEF2KMTQ96G04 330 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 PLIN2Q99541 437 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 EXOC1Q9NV70 894 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 MAGEA9P43362 315 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 CCNI2Q6ZMN8 369 aaPredicted RBP20.23■□□□□ 0.83
HNF4A-203ENST00000372920 GIMAP8Q8ND71 665 aaPredicted RBP20.23■□□□□ 0.83
HNF4A-203ENST00000372920 TUBGCP2Q9BSJ2 902 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 SELENOOQ9BVL4 669 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 ZNHIT6Q9NWK9 470 aaKnown RBP20.23■□□□□ 0.83
HNF4A-203ENST00000372920 BAZ2BQ9UIF8 2168 aaKnown RBP20.23■□□□□ 0.83
HNF4A-203ENST00000372920 ITGB4P16144 1822 aa20.23■□□□□ 0.83
HNF4A-203ENST00000372920 PPFIA4O75335 1185 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 DTHD1Q6ZMT9 781 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 CRACR2AQ9BSW2 395 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 BAZ2AQ9UIF9 1905 aaKnown RBP20.22■□□□□ 0.83
HNF4A-203ENST00000372920 ANKRD65E5RJM6 399 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 RHOBTB3O94955 611 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 IDEP14735 1019 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 CALML3P27482 149 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 GPKOWQ92917 476 aaPredicted RBP eCLIP20.22■□□□□ 0.83
HNF4A-203ENST00000372920 SMARCC1Q92922 1105 aaPredicted RBP20.22■□□□□ 0.83
HNF4A-203ENST00000372920 ANO9A1A5B4 782 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 MACROD2A1Z1Q3 448 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 AGPSO00116 658 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 IPO7O95373 1038 aaKnown RBP20.22■□□□□ 0.83
HNF4A-203ENST00000372920 CYP27A1Q02318 531 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 CSGALNACT2Q8N6G5 542 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 DUSP9Q99956 384 aaKnown RBP20.22■□□□□ 0.83
HNF4A-203ENST00000372920 JADE2Q9NQC1 790 aa20.22■□□□□ 0.83
HNF4A-203ENST00000372920 ORC4O43929 436 aa20.21■□□□□ 0.83
HNF4A-203ENST00000372920 C2orf54Q08AI8 447 aa20.21■□□□□ 0.83
HNF4A-203ENST00000372920 CCDC170Q8IYT3 715 aa20.21■□□□□ 0.83
HNF4A-203ENST00000372920 EFCC1Q9HA90 598 aa20.21■□□□□ 0.83
HNF4A-203ENST00000372920 NOP2P46087 812 aaKnown RBP20.21■□□□□ 0.83
HNF4A-203ENST00000372920 CORO7P57737 925 aa20.21■□□□□ 0.83
HNF4A-203ENST00000372920 ZBED6P86452 979 aa20.21■□□□□ 0.83
HNF4A-203ENST00000372920 PURBQ96QR8 312 aaKnown RBP20.21■□□□□ 0.83
HNF4A-203ENST00000372920 NUP58Q9BVL2 599 aa20.21■□□□□ 0.83
HNF4A-203ENST00000372920 TMEM60Q9H2L4 133 aa20.21■□□□□ 0.83
HNF4A-203ENST00000372920 CACNA1SQ13698 1873 aa20.21■□□□□ 0.83
HNF4A-203ENST00000372920 TBC1D8BQ0IIM8 1120 aa20.2■□□□□ 0.82
HNF4A-203ENST00000372920 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.2■□□□□ 0.82
HNF4A-203ENST00000372920 NOC3LQ8WTT2 800 aaKnown RBP20.2■□□□□ 0.82
HNF4A-203ENST00000372920 KBTBD4Q9NVX7 518 aa20.2■□□□□ 0.82
HNF4A-203ENST00000372920 PCDHA4Q9UN74 947 aa20.2■□□□□ 0.82
HNF4A-203ENST00000372920 DLEC1Q9Y238 1755 aa20.2■□□□□ 0.82
HNF4A-203ENST00000372920 UBA7P41226 1012 aa20.2■□□□□ 0.82
HNF4A-203ENST00000372920 RETREG2Q8NC44 543 aa20.2■□□□□ 0.82
HNF4A-203ENST00000372920 LRRC15Q8TF66 581 aa20.2■□□□□ 0.82
HNF4A-203ENST00000372920 COL22A1Q8NFW1 1626 aaPredicted RBP20.2■□□□□ 0.82
HNF4A-203ENST00000372920 DHTKD1Q96HY7 919 aaPredicted RBP20.19■□□□□ 0.82
HNF4A-203ENST00000372920 PCMTD1Q96MG8 357 aaPredicted RBP20.19■□□□□ 0.82
HNF4A-203ENST00000372920 HINFPQ9BQA5 517 aa20.19■□□□□ 0.82
HNF4A-203ENST00000372920 NTSR2O95665 410 aa20.19■□□□□ 0.82
HNF4A-203ENST00000372920 MYL1P05976 194 aa20.19■□□□□ 0.82
HNF4A-203ENST00000372920 SECISBP2LQ93073 1101 aaKnown RBP20.19■□□□□ 0.82
HNF4A-203ENST00000372920 COL4A1P02462 1669 aa20.19■□□□□ 0.82
HNF4A-203ENST00000372920 CYP2D6P10635 497 aa20.19■□□□□ 0.82
HNF4A-203ENST00000372920 KIF5AQ12840 1032 aa20.19■□□□□ 0.82
HNF4A-203ENST00000372920 CCDC194A0A1B0GVG4 234 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 KIF5BP33176 963 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 VAV2P52735 878 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 PARP10Q53GL7 1025 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 RCSD1Q6JBY9 416 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 TYW1BQ6NUM6 668 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 CNOT6LQ96LI5 555 aaKnown RBP20.18■□□□□ 0.82
HNF4A-203ENST00000372920 DCP1AQ9NPI6 582 aaPredicted RBP20.18■□□□□ 0.82
HNF4A-203ENST00000372920 ZNF263O14978 683 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 ANKRD40Q6AI12 368 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 IQCEQ6IPM2 695 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 INTS5Q6P9B9 1019 aaKnown RBP20.18■□□□□ 0.82
HNF4A-203ENST00000372920 PACS2Q86VP3 889 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 AENQ8WTP8 325 aaKnown RBP20.18■□□□□ 0.82
HNF4A-203ENST00000372920 CCSER1Q9C0I3 900 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 LRWD1Q9UFC0 647 aa20.18■□□□□ 0.82
HNF4A-203ENST00000372920 GOLGA6BA6NDN3 693 aa20.17■□□□□ 0.82
HNF4A-203ENST00000372920 TSPY2A6NKD2 308 aa20.17■□□□□ 0.82
HNF4A-203ENST00000372920 NUTM2BA6NNL0 878 aaPredicted RBP20.17■□□□□ 0.82
HNF4A-203ENST00000372920 NUTM2EB1AL46 878 aaPredicted RBP20.17■□□□□ 0.82
HNF4A-203ENST00000372920 SKIDA1Q1XH10 827 aa20.17■□□□□ 0.82
HNF4A-203ENST00000372920 CREG2Q8IUH2 290 aa20.17■□□□□ 0.82
HNF4A-203ENST00000372920 FAM76AQ8TAV0 307 aa20.17■□□□□ 0.82
HNF4A-203ENST00000372920 SMCR8Q8TEV9 937 aaPredicted RBP20.17■□□□□ 0.82
HNF4A-203ENST00000372920 P2RX5Q93086 422 aa20.17■□□□□ 0.82
HNF4A-203ENST00000372920 NIP7Q9Y221 180 aaKnown RBP eCLIP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms