RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 MTA3Q9BTC8 594 aa27.57■■■□□ 2
CITED4-201ENST00000372638 FLRT1Q9NZU1 646 aa27.57■■■□□ 2
CITED4-201ENST00000372638 PARP1P09874 1014 aaKnown RBP27.56■■■□□ 2
CITED4-201ENST00000372638 MCM5P33992 734 aa27.56■■■□□ 2
CITED4-201ENST00000372638 GJA8P48165 433 aa27.56■■■□□ 2
CITED4-201ENST00000372638 ANTXR2P58335 489 aa27.56■■■□□ 2
CITED4-201ENST00000372638 CACNB2Q08289 660 aaPredicted RBP27.56■■■□□ 2
CITED4-201ENST00000372638 TMEM67Q5HYA8 995 aa27.56■■■□□ 2
CITED4-201ENST00000372638 OLFML2BQ68BL8 750 aa27.56■■■□□ 2
CITED4-201ENST00000372638 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.56■■■□□ 2
CITED4-201ENST00000372638 DDX11Q96FC9 970 aa27.56■■■□□ 2
CITED4-201ENST00000372638 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.56■■■□□ 2
CITED4-201ENST00000372638 PAK6Q9NQU5 681 aaPredicted RBP27.56■■■□□ 2
CITED4-201ENST00000372638 ICAM1P05362 532 aa27.55■■■□□ 2
CITED4-201ENST00000372638 PGK2P07205 417 aa27.55■■■□□ 2
CITED4-201ENST00000372638 IGDCC4Q8TDY8 1250 aa27.55■■■□□ 2
CITED4-201ENST00000372638 DIS3Q9Y2L1 958 aaKnown RBP27.55■■■□□ 2
CITED4-201ENST00000372638 REC8O95072 547 aa27.54■■■□□ 2
CITED4-201ENST00000372638 SGPL1O95470 568 aa27.54■■■□□ 2
CITED4-201ENST00000372638 ALAS1P13196 640 aa27.54■■■□□ 2
CITED4-201ENST00000372638 ANKRD35Q8N283 1001 aa27.54■■■□□ 2
CITED4-201ENST00000372638 U2AF1L4Q8WU68 220 aaKnown RBP27.54■■■□□ 2
CITED4-201ENST00000372638 DEFB118Q96PH6 123 aa27.54■■■□□ 2
CITED4-201ENST00000372638 UBA5Q9GZZ9 404 aa27.54■■■□□ 2
CITED4-201ENST00000372638 ACAD9Q9H845 621 aa27.54■■■□□ 2
CITED4-201ENST00000372638 HOMER2Q9NSB8 354 aa27.54■■■□□ 2
CITED4-201ENST00000372638 RNF146Q9NTX7 359 aa27.54■■■□□ 2
CITED4-201ENST00000372638 PNMA2Q9UL42 364 aa27.54■■■□□ 2
CITED4-201ENST00000372638 CCPG1Q9ULG6 757 aa27.54■■■□□ 2
CITED4-201ENST00000372638 PRC1O43663 620 aa27.53■■■□□ 2
CITED4-201ENST00000372638 IGHA2P01877 340 aa27.53■■■□□ 2
CITED4-201ENST00000372638 CAPN2P17655 700 aa27.53■■■□□ 2
CITED4-201ENST00000372638 ZNF792Q3KQV3 632 aa27.53■■■□□ 2
CITED4-201ENST00000372638 TSGA10IPQ3SY00 556 aa27.53■■■□□ 2
CITED4-201ENST00000372638 MAML3Q96JK9 1138 aa27.53■■■□□ 2
CITED4-201ENST00000372638 TMEM87BQ96K49 555 aa27.53■■■□□ 2
CITED4-201ENST00000372638 TRERF1Q96PN7 1200 aa27.53■■■□□ 2
CITED4-201ENST00000372638 CYP2C19P33261 490 aa27.52■■■□□ 2
CITED4-201ENST00000372638 SENP2Q9HC62 589 aa27.52■■■□□ 2
CITED4-201ENST00000372638 KRT32Q14532 448 aa27.51■■□□□ 1.99
CITED4-201ENST00000372638 TMTC2Q8N394 836 aa27.51■■□□□ 1.99
CITED4-201ENST00000372638 CPVLQ9H3G5 476 aa27.51■■□□□ 1.99
CITED4-201ENST00000372638 CENPFP49454 3210 aa27.51■■□□□ 1.99
CITED4-201ENST00000372638 DNAJC25-GNG10A0A024R161 153 aa27.5■■□□□ 1.99
CITED4-201ENST00000372638 TFRCP02786 760 aaKnown RBP27.5■■□□□ 1.99
CITED4-201ENST00000372638 CATIPQ7Z7H3 387 aa27.5■■□□□ 1.99
CITED4-201ENST00000372638 RASEFQ8IZ41 740 aa27.5■■□□□ 1.99
CITED4-201ENST00000372638 SHISA4Q96DD7 197 aa27.5■■□□□ 1.99
CITED4-201ENST00000372638 NEK1Q96PY6 1258 aa27.5■■□□□ 1.99
CITED4-201ENST00000372638 PLXNA1Q9UIW2 1896 aa27.5■■□□□ 1.99
CITED4-201ENST00000372638 CCND3P30281 292 aaPredicted RBP27.49■■□□□ 1.99
CITED4-201ENST00000372638 ADGRF4Q8IZF3 695 aa27.49■■□□□ 1.99
CITED4-201ENST00000372638 LY9Q9HBG7 655 aa27.49■■□□□ 1.99
CITED4-201ENST00000372638 PALM3A6NDB9 673 aaPredicted RBP27.48■■□□□ 1.99
CITED4-201ENST00000372638 SMCHD1A6NHR9 2005 aa27.48■■□□□ 1.99
CITED4-201ENST00000372638 HSPA4P34932 840 aa27.48■■□□□ 1.99
CITED4-201ENST00000372638 TROAPQ12815 778 aa27.48■■□□□ 1.99
CITED4-201ENST00000372638 GRM4Q14833 912 aa27.48■■□□□ 1.99
CITED4-201ENST00000372638 STAG2Q8N3U4 1231 aa27.48■■□□□ 1.99
CITED4-201ENST00000372638 WDR19Q8NEZ3 1342 aa27.48■■□□□ 1.99
CITED4-201ENST00000372638 TINF2Q9BSI4 451 aa27.48■■□□□ 1.99
CITED4-201ENST00000372638 CRISPLD2Q9H0B8 497 aa27.48■■□□□ 1.99
CITED4-201ENST00000372638 MAD2L2Q9UI95 211 aa27.48■■□□□ 1.99
CITED4-201ENST00000372638 KLRF2D3W0D1 207 aa27.47■■□□□ 1.99
CITED4-201ENST00000372638 EPB41L2O43491 1005 aaKnown RBP27.47■■□□□ 1.99
CITED4-201ENST00000372638 DHX16O60231 1041 aaKnown RBP27.47■■□□□ 1.99
CITED4-201ENST00000372638 MUM1L1Q5H9M0 696 aa27.47■■□□□ 1.99
CITED4-201ENST00000372638 MSL3Q8N5Y2 521 aaKnown RBP27.47■■□□□ 1.99
CITED4-201ENST00000372638 KCNB2Q92953 911 aa27.47■■□□□ 1.99
CITED4-201ENST00000372638 VAT1LQ9HCJ6 419 aa27.47■■□□□ 1.99
CITED4-201ENST00000372638 A1CFQ9NQ94 594 aaKnown RBP27.47■■□□□ 1.99
CITED4-201ENST00000372638 GPHNQ9NQX3 736 aaPredicted RBP27.47■■□□□ 1.99
CITED4-201ENST00000372638 PFASO15067 1338 aa27.46■■□□□ 1.99
CITED4-201ENST00000372638 POTEB2H3BUK9 544 aa27.46■■□□□ 1.99
CITED4-201ENST00000372638 SH2B2O14492 632 aaPredicted RBP27.46■■□□□ 1.99
CITED4-201ENST00000372638 CNGA1P29973 690 aa27.46■■□□□ 1.99
CITED4-201ENST00000372638 LIFRP42702 1097 aa27.46■■□□□ 1.99
CITED4-201ENST00000372638 COL9A3Q14050 684 aaPredicted RBP27.46■■□□□ 1.99
CITED4-201ENST00000372638 CDC37Q16543 378 aaPredicted RBP27.46■■□□□ 1.99
CITED4-201ENST00000372638 NFXL1Q6ZNB6 911 aa27.46■■□□□ 1.99
CITED4-201ENST00000372638 CCDC69A6NI79 296 aa27.45■■□□□ 1.99
CITED4-201ENST00000372638 CYBAP13498 195 aa27.45■■□□□ 1.99
CITED4-201ENST00000372638 ADCK5Q3MIX3 580 aa27.45■■□□□ 1.99
CITED4-201ENST00000372638 DHX32Q7L7V1 743 aaKnown RBP27.45■■□□□ 1.99
CITED4-201ENST00000372638 ZNF467Q7Z7K2 595 aaPredicted RBP27.45■■□□□ 1.99
CITED4-201ENST00000372638 ZNF654Q8IZM8 581 aa27.45■■□□□ 1.99
CITED4-201ENST00000372638 MAP3K14Q99558 947 aa27.45■■□□□ 1.99
CITED4-201ENST00000372638 JMJD4Q9H9V9 463 aa27.45■■□□□ 1.99
CITED4-201ENST00000372638 NRBP1Q9UHY1 535 aa27.45■■□□□ 1.99
CITED4-201ENST00000372638 HMGB1P09429 215 aaKnown RBP27.44■■□□□ 1.98
CITED4-201ENST00000372638 TAL1P17542 331 aaPredicted RBP27.44■■□□□ 1.98
CITED4-201ENST00000372638 MAMDC4Q6UXC1 1216 aa27.44■■□□□ 1.98
CITED4-201ENST00000372638 NSMFQ6X4W1 530 aa27.44■■□□□ 1.98
CITED4-201ENST00000372638 FAM133AQ8N9E0 248 aa27.44■■□□□ 1.98
CITED4-201ENST00000372638 TRPV1Q8NER1 839 aa27.44■■□□□ 1.98
CITED4-201ENST00000372638 NUP133Q8WUM0 1156 aa27.44■■□□□ 1.98
CITED4-201ENST00000372638 MSCO60682 206 aa27.43■■□□□ 1.98
CITED4-201ENST00000372638 DDAH1O94760 285 aa27.43■■□□□ 1.98
CITED4-201ENST00000372638 EXOSC10Q01780 885 aaKnown RBP27.43■■□□□ 1.98
CITED4-201ENST00000372638 PRAMEF19Q5SWL8 479 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms