RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 RBBP5Q15291 538 aaKnown RBP25.34■■□□□ 1.65
NPAS3-201ENST00000346562 AOC3Q16853 763 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 TYW1Q9NV66 732 aaKnown RBP25.34■■□□□ 1.65
NPAS3-201ENST00000346562 TYW5A2RUC4 315 aaKnown RBP25.34■■□□□ 1.65
NPAS3-201ENST00000346562 FAM173BQ6P4H8 233 aa25.34■■□□□ 1.65
NPAS3-201ENST00000346562 ATP10AO60312 1499 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 MED23Q9ULK4 1368 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 JAK2O60674 1132 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 CCDC13Q8IYE1 715 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 NME8Q8N427 588 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 PNMA1Q8ND90 353 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 HGSO14964 777 aaPredicted RBP25.33■■□□□ 1.65
NPAS3-201ENST00000346562 IFNB1P01574 187 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 PTPREP23469 700 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 SCNN1DP51172 638 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 IRX4P78413 519 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 KCTD2Q14681 263 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 ZBTB38Q8NAP3 1195 aaPredicted RBP25.33■■□□□ 1.65
NPAS3-201ENST00000346562 ADALQ6DHV7 355 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 BBOF1Q8ND07 529 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 VCX3AQ9NNX9 186 aa25.33■■□□□ 1.65
NPAS3-201ENST00000346562 KIAA0232Q92628 1395 aa25.33■■□□□ 1.64
NPAS3-201ENST00000346562 HYOU1Q9Y4L1 999 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 SAR1BQ9Y6B6 198 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 SCG2P13521 617 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 DOK7Q18PE1 504 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 WHAMMP3Q1A5X7 153 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 MYSM1Q5VVJ2 828 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 NXNQ6DKJ4 435 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 ANKRD42Q8N9B4 389 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 PCP11498 1178 aaKnown RBP25.32■■□□□ 1.64
NPAS3-201ENST00000346562 DIXDC1Q155Q3 683 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 ABCB5Q2M3G0 1257 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 A6NJR5 290 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 KRIT1O00522 736 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 SLFN13Q68D06 897 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 PPP1R12CQ9BZL4 782 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 KLRF2D3W0D1 207 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 FOSP01100 380 aaPredicted RBP25.32■■□□□ 1.64
NPAS3-201ENST00000346562 POLA2Q14181 598 aa25.32■■□□□ 1.64
NPAS3-201ENST00000346562 LARSQ9P2J5 1176 aaKnown RBP25.32■■□□□ 1.64
NPAS3-201ENST00000346562 GSTA1P08263 222 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 GSTA2P09210 222 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 GYG1P46976 350 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 TXNDC9O14530 226 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 PPP2R5AQ15172 486 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 BBS5Q8N3I7 341 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 LRRIQ4A6NIV6 560 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 TMEM232C9JQI7 657 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 PFKFB1P16118 471 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 CTNNA1P35221 906 aaKnown RBP25.31■■□□□ 1.64
NPAS3-201ENST00000346562 C4orf50Q6ZRC1 276 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 KIAA0825Q8IV33 1275 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 GBP7Q8N8V2 638 aaPredicted RBP25.31■■□□□ 1.64
NPAS3-201ENST00000346562 FANCBQ8NB91 859 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 THRAP3Q9Y2W1 955 aaKnown RBP25.31■■□□□ 1.64
NPAS3-201ENST00000346562 KCNK3O14649 394 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 IGBP1P78318 339 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 ABI1Q8IZP0 508 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 MGARPQ8TDB4 240 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 ANKFY1Q9P2R3 1169 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 DLATP10515 647 aaKnown RBP25.31■■□□□ 1.64
NPAS3-201ENST00000346562 LMNB1P20700 586 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 USP14P54578 494 aa25.31■■□□□ 1.64
NPAS3-201ENST00000346562 JPH2Q9BR39 696 aaPredicted RBP25.3■■□□□ 1.64
NPAS3-201ENST00000346562 RNF10Q8N5U6 811 aaKnown RBP25.3■■□□□ 1.64
NPAS3-201ENST00000346562 OR8K1Q8NGG5 319 aa25.3■■□□□ 1.64
NPAS3-201ENST00000346562 DDX41Q9UJV9 622 aaKnown RBP25.3■■□□□ 1.64
NPAS3-201ENST00000346562 PLXNC1O60486 1568 aa25.3■■□□□ 1.64
NPAS3-201ENST00000346562 TCOF1Q13428 1488 aaKnown RBP25.3■■□□□ 1.64
NPAS3-201ENST00000346562 TNKSO95271 1327 aa25.3■■□□□ 1.64
NPAS3-201ENST00000346562 KIAA0556O60303 1618 aa25.3■■□□□ 1.64
NPAS3-201ENST00000346562 ANAPC5Q9UJX4 755 aa25.3■■□□□ 1.64
NPAS3-201ENST00000346562 WDR17Q8IZU2 1322 aa25.3■■□□□ 1.64
NPAS3-201ENST00000346562 SSH2Q76I76 1423 aa25.3■■□□□ 1.64
NPAS3-201ENST00000346562 PPEF1O14829 653 aaPredicted RBP25.29■■□□□ 1.64
NPAS3-201ENST00000346562 ELF2Q15723 593 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 DPP9Q86TI2 863 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 TPCN1Q9ULQ1 816 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 GTPBP6O43824 516 aaPredicted RBP25.29■■□□□ 1.64
NPAS3-201ENST00000346562 METTL23Q86XA0 190 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.29■■□□□ 1.64
NPAS3-201ENST00000346562 RUNDC3BQ96NL0 473 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 MAGEF1Q9HAY2 307 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 CTTNBP2Q8WZ74 1663 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 TRIML1Q8N9V2 468 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 ZMYM4Q5VZL5 1548 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 RNF8O76064 485 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 SRGAP2BP0DMP2 458 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 MAP7D3Q8IWC1 876 aa25.29■■□□□ 1.64
NPAS3-201ENST00000346562 PCCAP05165 728 aaPredicted RBP25.29■■□□□ 1.64
NPAS3-201ENST00000346562 PDE6AP16499 860 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 NSFP46459 744 aaKnown RBP25.28■■□□□ 1.64
NPAS3-201ENST00000346562 CHRNDQ07001 517 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 CDKL2Q92772 493 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 AP5M1Q9H0R1 490 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 LRFN2Q9ULH4 789 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 SEC24BO95487 1268 aa25.28■■□□□ 1.64
NPAS3-201ENST00000346562 XPAP23025 273 aaPredicted RBP25.28■■□□□ 1.64
NPAS3-201ENST00000346562 BFSP1Q12934 665 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms