RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 TRIM43Q96BQ3 446 aaPredicted RBP20.21■□□□□ 0.83
VSTM1-201ENST00000338372 DDX11Q96FC9 970 aa20.21■□□□□ 0.83
VSTM1-201ENST00000338372 PDLIM7Q9NR12 457 aa20.21■□□□□ 0.83
VSTM1-201ENST00000338372 TCP11L1Q9NUJ3 509 aa20.21■□□□□ 0.83
VSTM1-201ENST00000338372 ATP11BQ9Y2G3 1177 aa20.21■□□□□ 0.83
VSTM1-201ENST00000338372 ASTN1O14525 1302 aa20.21■□□□□ 0.83
VSTM1-201ENST00000338372 LAMA4Q16363 1823 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 TSPY2A6NKD2 308 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 CTAGE5O15320 804 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 ITGB8P26012 769 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 SLC1A4P43007 532 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 STAT2P52630 851 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 CNTN2Q02246 1040 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 BTNL9Q6UXG8 535 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 CHURC1Q8WUH1 139 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 CHMP4CQ96CF2 233 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.2■□□□□ 0.82
VSTM1-201ENST00000338372 FBXO40Q9UH90 709 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 PRR12Q9ULL5 1215 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 STX8Q9UNK0 236 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 SYNRGQ9UMZ2 1314 aa20.2■□□□□ 0.82
VSTM1-201ENST00000338372 MYADML2A6NDP7 307 aa20.19■□□□□ 0.82
VSTM1-201ENST00000338372 SOWAHBA6NEL2 793 aa20.19■□□□□ 0.82
VSTM1-201ENST00000338372 NKX3-2P78367 333 aa20.19■□□□□ 0.82
VSTM1-201ENST00000338372 ACVR2BQ13705 512 aa20.19■□□□□ 0.82
VSTM1-201ENST00000338372 CHD1LQ86WJ1 897 aa20.19■□□□□ 0.82
VSTM1-201ENST00000338372 YTHDC1Q96MU7 727 aaKnown RBP20.19■□□□□ 0.82
VSTM1-201ENST00000338372 TSEN34Q9BSV6 310 aaKnown RBP20.19■□□□□ 0.82
VSTM1-201ENST00000338372 A1CFQ9NQ94 594 aaKnown RBP20.19■□□□□ 0.82
VSTM1-201ENST00000338372 A0A1W2PQ45 241 aaPredicted RBP20.18■□□□□ 0.82
VSTM1-201ENST00000338372 A0A1W2PQY0 241 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 RANBP6O60518 1105 aaKnown RBP20.18■□□□□ 0.82
VSTM1-201ENST00000338372 SDSP20132 328 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 SLC4A3P48751 1232 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 SNAP25P60880 206 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 TLE2Q04725 743 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 TTBK2Q6IQ55 1244 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 B4GALNT3Q6L9W6 998 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 ARMCX2Q7L311 632 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 ANKRD35Q8N283 1001 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 TMEM47Q9BQJ4 181 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 UPF3AQ9H1J1 476 aaKnown RBP20.18■□□□□ 0.82
VSTM1-201ENST00000338372 RWDD1Q9H446 243 aaPredicted RBP20.18■□□□□ 0.82
VSTM1-201ENST00000338372 FAM184BQ9ULE4 1060 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 CNPY2Q9Y2B0 182 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 CCDC171Q6TFL3 1326 aa20.18■□□□□ 0.82
VSTM1-201ENST00000338372 DUSP11O75319 330 aaKnown RBP20.17■□□□□ 0.82
VSTM1-201ENST00000338372 CST5P28325 142 aaPredicted RBP20.17■□□□□ 0.82
VSTM1-201ENST00000338372 MUM1L1Q5H9M0 696 aa20.17■□□□□ 0.82
VSTM1-201ENST00000338372 Q7L0L9 218 aa20.17■□□□□ 0.82
VSTM1-201ENST00000338372 RNF180Q86T96 592 aa20.17■□□□□ 0.82
VSTM1-201ENST00000338372 TBC1D10CQ8IV04 446 aa20.17■□□□□ 0.82
VSTM1-201ENST00000338372 CCDC144CPQ8IYA2 1237 aa20.17■□□□□ 0.82
VSTM1-201ENST00000338372 RANBP17Q9H2T7 1088 aaKnown RBP20.17■□□□□ 0.82
VSTM1-201ENST00000338372 ABHD16BQ9H3Z7 469 aa20.17■□□□□ 0.82
VSTM1-201ENST00000338372 ACAD9Q9H845 621 aa20.17■□□□□ 0.82
VSTM1-201ENST00000338372 RNF146Q9NTX7 359 aa20.17■□□□□ 0.82
VSTM1-201ENST00000338372 ZBTB47Q9UFB7 747 aaPredicted RBP20.17■□□□□ 0.82
VSTM1-201ENST00000338372 POTEB2H3BUK9 544 aa20.16■□□□□ 0.82
VSTM1-201ENST00000338372 MYCNP04198 464 aaPredicted RBP20.16■□□□□ 0.82
VSTM1-201ENST00000338372 ACLYP53396 1101 aa20.16■□□□□ 0.82
VSTM1-201ENST00000338372 KCNA10Q16322 511 aa20.16■□□□□ 0.82
VSTM1-201ENST00000338372 TKFCQ3LXA3 575 aa20.16■□□□□ 0.82
VSTM1-201ENST00000338372 CCDC144BQ3MJ40 725 aa20.16■□□□□ 0.82
VSTM1-201ENST00000338372 DCAF4Q8WV16 495 aa20.16■□□□□ 0.82
VSTM1-201ENST00000338372 TRERF1Q96PN7 1200 aa20.16■□□□□ 0.82
VSTM1-201ENST00000338372 HOMER2Q9NSB8 354 aa20.16■□□□□ 0.82
VSTM1-201ENST00000338372 MTMR10Q9NXD2 777 aa20.16■□□□□ 0.82
VSTM1-201ENST00000338372 DDX49Q9Y6V7 483 aaKnown RBP20.16■□□□□ 0.82
VSTM1-201ENST00000338372 SNHG28P0DPA3 235 aa20.15■□□□□ 0.82
VSTM1-201ENST00000338372 CDK7P50613 346 aa20.15■□□□□ 0.82
VSTM1-201ENST00000338372 GJA9P57773 515 aa20.15■□□□□ 0.82
VSTM1-201ENST00000338372 HAND2P61296 217 aa20.15■□□□□ 0.82
VSTM1-201ENST00000338372 C9orf50Q5SZB4 431 aa20.15■□□□□ 0.82
VSTM1-201ENST00000338372 ANKRD33Q7Z3H0 272 aa20.15■□□□□ 0.82
VSTM1-201ENST00000338372 BADQ92934 168 aa20.15■□□□□ 0.82
VSTM1-201ENST00000338372 ZHX1Q9UKY1 873 aaPredicted RBP20.15■□□□□ 0.82
VSTM1-201ENST00000338372 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.14■□□□□ 0.81
VSTM1-201ENST00000338372 TRIM6-TRIM34B2RNG4 842 aa20.14■□□□□ 0.81
VSTM1-201ENST00000338372 KIAA0355O15063 1070 aa20.14■□□□□ 0.81
VSTM1-201ENST00000338372 TOP1P11387 765 aaKnown RBP20.14■□□□□ 0.81
VSTM1-201ENST00000338372 SHHQ15465 462 aa20.14■□□□□ 0.81
VSTM1-201ENST00000338372 AKNAD1Q5T1N1 836 aa20.14■□□□□ 0.81
VSTM1-201ENST00000338372 DEFB123Q8N688 67 aa20.14■□□□□ 0.81
VSTM1-201ENST00000338372 MORC4Q8TE76 937 aa20.14■□□□□ 0.81
VSTM1-201ENST00000338372 RILPL2Q969X0 211 aa20.14■□□□□ 0.81
VSTM1-201ENST00000338372 TOX2Q96NM4 488 aa20.14■□□□□ 0.81
VSTM1-201ENST00000338372 CYP39A1Q9NYL5 469 aa20.14■□□□□ 0.81
VSTM1-201ENST00000338372 GNEQ9Y223 722 aaKnown RBP20.14■□□□□ 0.81
VSTM1-201ENST00000338372 CTDP1Q9Y5B0 961 aaPredicted RBP20.14■□□□□ 0.81
VSTM1-201ENST00000338372 MOXD2PA6NHM9 499 aa20.13■□□□□ 0.81
VSTM1-201ENST00000338372 ICAM1P05362 532 aa20.13■□□□□ 0.81
VSTM1-201ENST00000338372 PDHBP11177 359 aa20.13■□□□□ 0.81
VSTM1-201ENST00000338372 ALAS1P13196 640 aa20.13■□□□□ 0.81
VSTM1-201ENST00000338372 SLC16A2P36021 539 aa20.13■□□□□ 0.81
VSTM1-201ENST00000338372 EPHB4P54760 987 aa20.13■□□□□ 0.81
VSTM1-201ENST00000338372 FAAP100Q0VG06 881 aa20.13■□□□□ 0.81
VSTM1-201ENST00000338372 CCDC174Q6PII3 467 aa20.13■□□□□ 0.81
VSTM1-201ENST00000338372 TTC14Q96N46 770 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms