RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 AGBL1Q96MI9 1066 aa23.2■■□□□ 1.3
HIGD1A-201ENST00000321331 PNMA2Q9UL42 364 aa23.2■■□□□ 1.3
HIGD1A-201ENST00000321331 ICAM1P05362 532 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 EN2P19622 333 aaPredicted RBP23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 ANTXR2P58335 489 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 SNAP25P60880 206 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 MLLT1Q03111 559 aaPredicted RBP23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 MAP3K21Q5TCX8 1036 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 OLFML2BQ68BL8 750 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 ANKRD35Q8N283 1001 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.19■■□□□ 1.39e-18■■■■□ 20.2
HIGD1A-201ENST00000321331 ACAD9Q9H845 621 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 HOMER2Q9NSB8 354 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 FLRT1Q9NZU1 646 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 CCPG1Q9ULG6 757 aa23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 ZNFX1Q9P2E3 1918 aaKnown RBP23.19■■□□□ 1.3
HIGD1A-201ENST00000321331 PRC1O43663 620 aa23.18■■□□□ 1.3
HIGD1A-201ENST00000321331 ALAS1P13196 640 aa23.18■■□□□ 1.3
HIGD1A-201ENST00000321331 GJA8P48165 433 aa23.18■■□□□ 1.3
HIGD1A-201ENST00000321331 CACNB2Q08289 660 aaPredicted RBP23.18■■□□□ 1.3
HIGD1A-201ENST00000321331 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.18■■□□□ 1.3
HIGD1A-201ENST00000321331 PAK6Q9NQU5 681 aaPredicted RBP23.18■■□□□ 1.3
HIGD1A-201ENST00000321331 RNF146Q9NTX7 359 aa23.18■■□□□ 1.3
HIGD1A-201ENST00000321331 PGK2P07205 417 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 CAPN2P17655 700 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 KRT32Q14532 448 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 CATIPQ7Z7H3 387 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 IGDCC4Q8TDY8 1250 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 U2AF1L4Q8WU68 220 aaKnown RBP23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 MAML3Q96JK9 1138 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 TMEM87BQ96K49 555 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 DEFB118Q96PH6 123 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 TRERF1Q96PN7 1200 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 NEK1Q96PY6 1258 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 UBA5Q9GZZ9 404 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 DIS3Q9Y2L1 958 aaKnown RBP23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 BRCA2P51587 3418 aa23.17■■□□□ 1.3
HIGD1A-201ENST00000321331 SGPL1O95470 568 aa23.16■■□□□ 1.3
HIGD1A-201ENST00000321331 TSGA10IPQ3SY00 556 aa23.16■■□□□ 1.3
HIGD1A-201ENST00000321331 CYP2C19P33261 490 aa23.15■■□□□ 1.3
HIGD1A-201ENST00000321331 ZNF792Q3KQV3 632 aa23.15■■□□□ 1.3
HIGD1A-201ENST00000321331 TMTC2Q8N394 836 aa23.15■■□□□ 1.3
HIGD1A-201ENST00000321331 WDR19Q8NEZ3 1342 aa23.15■■□□□ 1.3
HIGD1A-201ENST00000321331 EPB41L2O43491 1005 aaKnown RBP23.14■■□□□ 1.3
HIGD1A-201ENST00000321331 DHX16O60231 1041 aaKnown RBP23.14■■□□□ 1.3
HIGD1A-201ENST00000321331 RASEFQ8IZ41 740 aa23.14■■□□□ 1.3
HIGD1A-201ENST00000321331 CPVLQ9H3G5 476 aa23.14■■□□□ 1.3
HIGD1A-201ENST00000321331 LY9Q9HBG7 655 aa23.14■■□□□ 1.3
HIGD1A-201ENST00000321331 SENP2Q9HC62 589 aa23.14■■□□□ 1.3
HIGD1A-201ENST00000321331 PLXNA1Q9UIW2 1896 aa23.14■■□□□ 1.3
HIGD1A-201ENST00000321331 DNAJC25-GNG10A0A024R161 153 aa23.14■■□□□ 1.29
HIGD1A-201ENST00000321331 SH2B2O14492 632 aaPredicted RBP23.14■■□□□ 1.29
HIGD1A-201ENST00000321331 TROAPQ12815 778 aa23.14■■□□□ 1.29
HIGD1A-201ENST00000321331 GRM4Q14833 912 aa23.14■■□□□ 1.29
HIGD1A-201ENST00000321331 NFXL1Q6ZNB6 911 aa23.14■■□□□ 1.29
HIGD1A-201ENST00000321331 ADGRF4Q8IZF3 695 aa23.14■■□□□ 1.29
HIGD1A-201ENST00000321331 MAD2L2Q9UI95 211 aa23.14■■□□□ 1.29
HIGD1A-201ENST00000321331 PFASO15067 1338 aa23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 PALM3A6NDB9 673 aaPredicted RBP23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 CCDC69A6NI79 296 aa23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 KLRF2D3W0D1 207 aa23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 IGHA2P01877 340 aa23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 TFRCP02786 760 aaKnown RBP23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 CCND3P30281 292 aaPredicted RBP23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 HSPA4P34932 840 aa23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 LIFRP42702 1097 aa23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 STAG2Q8N3U4 1231 aa23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 SHISA4Q96DD7 197 aa23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 TINF2Q9BSI4 451 aa23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 A1CFQ9NQ94 594 aaKnown RBP23.13■■□□□ 1.29
HIGD1A-201ENST00000321331 HMGB1P09429 215 aaKnown RBP23.12■■□□□ 1.29
HIGD1A-201ENST00000321331 CDC37Q16543 378 aaPredicted RBP23.12■■□□□ 1.29
HIGD1A-201ENST00000321331 MSL3Q8N5Y2 521 aaKnown RBP23.12■■□□□ 1.29
HIGD1A-201ENST00000321331 NUP133Q8WUM0 1156 aa23.12■■□□□ 1.29
HIGD1A-201ENST00000321331 KCNB2Q92953 911 aa23.12■■□□□ 1.29
HIGD1A-201ENST00000321331 VAT1LQ9HCJ6 419 aa23.12■■□□□ 1.29
HIGD1A-201ENST00000321331 POTEB2H3BUK9 544 aa23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 DDAH1O94760 285 aa23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 CNGA1P29973 690 aa23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 ADCK5Q3MIX3 580 aa23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 MUM1L1Q5H9M0 696 aa23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 DHX32Q7L7V1 743 aaKnown RBP23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 ZNF467Q7Z7K2 595 aaPredicted RBP23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 ZNF654Q8IZM8 581 aa23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 MAP3K14Q99558 947 aa23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 CRISPLD2Q9H0B8 497 aa23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 GPHNQ9NQX3 736 aaPredicted RBP23.11■■□□□ 1.29
HIGD1A-201ENST00000321331 MSCO60682 206 aa23.1■■□□□ 1.29
HIGD1A-201ENST00000321331 CYBAP13498 195 aa23.1■■□□□ 1.29
HIGD1A-201ENST00000321331 KIF5BP33176 963 aa23.1■■□□□ 1.29
HIGD1A-201ENST00000321331 NSMFQ6X4W1 530 aa23.1■■□□□ 1.29
HIGD1A-201ENST00000321331 CTCFLQ8NI51 663 aaPredicted RBP23.1■■□□□ 1.29
HIGD1A-201ENST00000321331 LRRC2Q9BYS8 371 aa23.1■■□□□ 1.29
HIGD1A-201ENST00000321331 JMJD4Q9H9V9 463 aa23.1■■□□□ 1.29
HIGD1A-201ENST00000321331 NRBP1Q9UHY1 535 aa23.1■■□□□ 1.29
HIGD1A-201ENST00000321331 TAL1P17542 331 aaPredicted RBP23.09■■□□□ 1.29
HIGD1A-201ENST00000321331 COL9A3Q14050 684 aaPredicted RBP23.09■■□□□ 1.29
HIGD1A-201ENST00000321331 USH1GQ495M9 461 aa23.09■■□□□ 1.29
HIGD1A-201ENST00000321331 CYP39A1Q9NYL5 469 aa23.09■■□□□ 1.29
HIGD1A-201ENST00000321331 CNPY2Q9Y2B0 182 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms