RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 ABRAQ8N0Z2 381 aa21.83■■□□□ 1.09
CIRBP-201ENST00000320936 IGDCC4Q8TDY8 1250 aa21.83■■□□□ 1.09
CIRBP-201ENST00000320936 NUP133Q8WUM0 1156 aa21.83■■□□□ 1.09
CIRBP-201ENST00000320936 JAKMIP1Q96N16 626 aaKnown RBP21.83■■□□□ 1.09
CIRBP-201ENST00000320936 RANBP17Q9H2T7 1088 aaKnown RBP21.83■■□□□ 1.09
CIRBP-201ENST00000320936 LY9Q9HBG7 655 aa21.83■■□□□ 1.09
CIRBP-201ENST00000320936 RNF146Q9NTX7 359 aa21.83■■□□□ 1.09
CIRBP-201ENST00000320936 FBXO40Q9UH90 709 aa21.83■■□□□ 1.09
CIRBP-201ENST00000320936 SH2B2O14492 632 aaPredicted RBP21.82■■□□□ 1.08
CIRBP-201ENST00000320936 CCL5P13501 91 aa21.82■■□□□ 1.08
CIRBP-201ENST00000320936 FGD1P98174 961 aa21.82■■□□□ 1.08
CIRBP-201ENST00000320936 COL9A3Q14050 684 aaPredicted RBP21.82■■□□□ 1.08
CIRBP-201ENST00000320936 MTFR1Q15390 333 aa21.82■■□□□ 1.08
CIRBP-201ENST00000320936 ADCK5Q3MIX3 580 aa21.82■■□□□ 1.08
CIRBP-201ENST00000320936 DDX11Q96FC9 970 aa21.82■■□□□ 1.08
CIRBP-201ENST00000320936 ZNF536O15090 1300 aa21.82■■□□□ 1.08
CIRBP-201ENST00000320936 ICAM1P05362 532 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 PGK2P07205 417 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 TAL1P17542 331 aaPredicted RBP21.81■■□□□ 1.08
CIRBP-201ENST00000320936 TSGA10IPQ3SY00 556 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 ZNF654Q8IZM8 581 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 ANKRD35Q8N283 1001 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 CHST13Q8NET6 341 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 TCEANC2Q96MN5 208 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 TRERF1Q96PN7 1200 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 MTA3Q9BTC8 594 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 RNF208Q9H0X6 261 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 ACAD9Q9H845 621 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 SNX14Q9Y5W7 946 aa21.81■■□□□ 1.08
CIRBP-201ENST00000320936 HMGB1P09429 215 aaKnown RBP21.8■■□□□ 1.08
CIRBP-201ENST00000320936 PRKAR2AP13861 404 aaKnown RBP21.8■■□□□ 1.08
CIRBP-201ENST00000320936 TRIM32Q13049 653 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 GRM4Q14833 912 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 TKFCQ3LXA3 575 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 MFSD14CQ5VZR4 134 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 DHX32Q7L7V1 743 aaKnown RBP21.8■■□□□ 1.08
CIRBP-201ENST00000320936 TMTC2Q8N394 836 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 STAG2Q8N3U4 1231 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 NPLOC4Q8TAT6 608 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 MYL10Q9BUA6 226 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 UNC93B1Q9H1C4 597 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 VAT1LQ9HCJ6 419 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 KIAA0100Q14667 2235 aaKnown RBP21.8■■□□□ 1.08
CIRBP-201ENST00000320936 KLRF2D3W0D1 207 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 COBLO75128 1261 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 HOXC6P09630 235 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 CDC37Q16543 378 aaPredicted RBP21.8■■□□□ 1.08
CIRBP-201ENST00000320936 ADGRF4Q8IZF3 695 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 CTCFLQ8NI51 663 aaPredicted RBP21.8■■□□□ 1.08
CIRBP-201ENST00000320936 MAD2L2Q9UI95 211 aa21.8■■□□□ 1.08
CIRBP-201ENST00000320936 WDR19Q8NEZ3 1342 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 SMCHD1A6NHR9 2005 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 EPB41L2O43491 1005 aaKnown RBP21.79■■□□□ 1.08
CIRBP-201ENST00000320936 DDAH1O94760 285 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 USH1GQ495M9 461 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 BLOC1S2Q6QNY1 142 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 SYNE3Q6ZMZ3 975 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 USP26Q9BXU7 913 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 FLRT1Q9NZU1 646 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 PNMA2Q9UL42 364 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 NAP1L2Q9ULW6 460 aaPredicted RBP21.79■■□□□ 1.08
CIRBP-201ENST00000320936 SLC12A7Q9Y666 1083 aa21.79■■□□□ 1.08
CIRBP-201ENST00000320936 POTEFA5A3E0 1075 aa21.78■■□□□ 1.08
CIRBP-201ENST00000320936 EIF5BO60841 1220 aaKnown RBP21.78■■□□□ 1.08
CIRBP-201ENST00000320936 CPA1P15085 419 aa21.78■■□□□ 1.08
CIRBP-201ENST00000320936 CASTP20810 708 aaKnown RBP21.78■■□□□ 1.08
CIRBP-201ENST00000320936 PSMA5P28066 241 aa21.78■■□□□ 1.08
CIRBP-201ENST00000320936 KIF5BP33176 963 aa21.78■■□□□ 1.08
CIRBP-201ENST00000320936 LIFRP42702 1097 aa21.78■■□□□ 1.08
CIRBP-201ENST00000320936 TROAPQ12815 778 aa21.78■■□□□ 1.08
CIRBP-201ENST00000320936 RAB11FIP4Q86YS3 637 aa21.78■■□□□ 1.08
CIRBP-201ENST00000320936 KCNB2Q92953 911 aa21.78■■□□□ 1.08
CIRBP-201ENST00000320936 HMX1Q9NP08 348 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-201ENST00000320936 PALM3A6NDB9 673 aaPredicted RBP21.77■■□□□ 1.07
CIRBP-201ENST00000320936 RXRAP19793 462 aa21.77■■□□□ 1.07
CIRBP-201ENST00000320936 CYP2C19P33261 490 aa21.77■■□□□ 1.07
CIRBP-201ENST00000320936 MUM1L1Q5H9M0 696 aa21.77■■□□□ 1.07
CIRBP-201ENST00000320936 NSMFQ6X4W1 530 aa21.77■■□□□ 1.07
CIRBP-201ENST00000320936 MICU3Q86XE3 530 aa21.77■■□□□ 1.07
CIRBP-201ENST00000320936 HOMER1Q86YM7 354 aa21.77■■□□□ 1.07
CIRBP-201ENST00000320936 CCDC144CPQ8IYA2 1237 aa21.77■■□□□ 1.07
CIRBP-201ENST00000320936 MAML3Q96JK9 1138 aa21.77■■□□□ 1.07
CIRBP-201ENST00000320936 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.77■■□□□ 1.074e-7■■■■□ 22.1
CIRBP-201ENST00000320936 PFASO15067 1338 aa21.76■■□□□ 1.07
CIRBP-201ENST00000320936 CALM1P0DP23 149 aa21.76■■□□□ 1.07
CIRBP-201ENST00000320936 CALM2P0DP24 149 aa21.76■■□□□ 1.07
CIRBP-201ENST00000320936 CALM3P0DP25 149 aa21.76■■□□□ 1.07
CIRBP-201ENST00000320936 EXOSC10Q01780 885 aaKnown RBP21.76■■□□□ 1.07
CIRBP-201ENST00000320936 CACNB2Q08289 660 aaPredicted RBP21.76■■□□□ 1.07
CIRBP-201ENST00000320936 OLFML2BQ68BL8 750 aa21.76■■□□□ 1.07
CIRBP-201ENST00000320936 DEFB118Q96PH6 123 aa21.76■■□□□ 1.07
CIRBP-201ENST00000320936 JMJD4Q9H9V9 463 aa21.76■■□□□ 1.07
CIRBP-201ENST00000320936 A1CFQ9NQ94 594 aaKnown RBP21.76■■□□□ 1.07
CIRBP-201ENST00000320936 BRCA2P51587 3418 aa21.75■■□□□ 1.07
CIRBP-201ENST00000320936 BAZ2BQ9UIF8 2168 aaKnown RBP21.75■■□□□ 1.07
CIRBP-201ENST00000320936 RPTORQ8N122 1335 aa21.75■■□□□ 1.07
CIRBP-201ENST00000320936 POTEB2H3BUK9 544 aa21.75■■□□□ 1.07
CIRBP-201ENST00000320936 CNGA1P29973 690 aa21.75■■□□□ 1.07
CIRBP-201ENST00000320936 QRICH1Q2TAL8 776 aa21.75■■□□□ 1.07
CIRBP-201ENST00000320936 ZNF792Q3KQV3 632 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms