RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 NCAPH2Q6IBW4 605 aa13.02□□□□□ -0.32
LDLRAD3-201ENST00000315571 ANKZF1Q9H8Y5 726 aa13.02□□□□□ -0.32
LDLRAD3-201ENST00000315571 GUCA1BQ9UMX6 200 aa13.02□□□□□ -0.32
LDLRAD3-201ENST00000315571 ATP5JP18859 108 aa13.02□□□□□ -0.33
LDLRAD3-201ENST00000315571 WHAMMP3Q1A5X7 153 aa13.02□□□□□ -0.33
LDLRAD3-201ENST00000315571 PI4K2BQ8TCG2 481 aa13.02□□□□□ -0.33
LDLRAD3-201ENST00000315571 MRPS27Q92552 414 aaKnown RBP13.02□□□□□ -0.33
LDLRAD3-201ENST00000315571 IL17RAQ96F46 866 aa13.02□□□□□ -0.33
LDLRAD3-201ENST00000315571 CCDC102BQ68D86 513 aa13.02□□□□□ -0.33
LDLRAD3-201ENST00000315571 CYB5D1Q6P9G0 228 aa13.02□□□□□ -0.33
LDLRAD3-201ENST00000315571 PRDM16Q9HAZ2 1276 aa13.02□□□□□ -0.33
LDLRAD3-201ENST00000315571 COL11A2P13942 1736 aaPredicted RBP13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 UQCRFS1P1P0C7P4 283 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 DALRD3Q5D0E6 543 aaKnown RBP13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 MAATS1Q7Z4T9 603 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 AMOTL1Q8IY63 956 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 SLC35F6Q8N357 371 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 WTIPA6NIX2 430 aaPredicted RBP13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 PCK1P35558 622 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 PHKA1P46020 1223 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 GYG1P46976 350 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 SMTNP53814 917 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 ANKRD1Q15327 319 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 BATF3Q9NR55 127 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 RPS6KL1Q9Y6S9 549 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 BCAMP50895 628 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 CPLX4Q7Z7G2 160 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 PPP1R12CQ9BZL4 782 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 TSGA10Q9BZW7 698 aa13.01□□□□□ -0.33
LDLRAD3-201ENST00000315571 MRPL12P52815 198 aaKnown RBP13□□□□□ -0.33
LDLRAD3-201ENST00000315571 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
LDLRAD3-201ENST00000315571 FILIP1LQ4L180 1135 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 TRIM58Q8NG06 486 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 GPR101Q96P66 508 aaPredicted RBP13□□□□□ -0.33
LDLRAD3-201ENST00000315571 JADE2Q9NQC1 790 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 JAK2O60674 1132 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 TBC1D16Q8TBP0 767 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 CCDC47Q96A33 483 aaKnown RBP13□□□□□ -0.33
LDLRAD3-201ENST00000315571 SNRKQ9NRH2 765 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 PAPOLBQ9NRJ5 636 aaKnown RBP13□□□□□ -0.33
LDLRAD3-201ENST00000315571 LRRD1A4D1F6 860 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 G3V3G9 751 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 KCNA3P22001 575 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
LDLRAD3-201ENST00000315571 GRIK3Q13003 919 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 DCAF8Q5TAQ9 597 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 BCS1LQ9Y276 419 aa13□□□□□ -0.33
LDLRAD3-201ENST00000315571 PPFIA2O75334 1257 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 POLR3DP05423 398 aaPredicted RBP12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 GNAT1P11488 350 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 KLRK1P26718 216 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 SYCP3Q8IZU3 236 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 NOA1Q8NC60 698 aaKnown RBP12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 TATDN2Q93075 761 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 OSBPL9Q96SU4 736 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 EYA3Q99504 573 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 IQSEC3Q9UPP2 1182 aaPredicted RBP12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 TMEM232C9JQI7 657 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 PAPOLAP51003 745 aaKnown RBP12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 MYL5Q02045 173 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 ADCK5Q3MIX3 580 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 ZNF804AQ7Z570 1209 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 FHDC1Q9C0D6 1143 aaPredicted RBP12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 KDM4CQ9H3R0 1056 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 KIAA1468Q9P260 1216 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 POLLQ9UGP5 575 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 SOGA3Q5TF21 947 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 NDUFB9Q9Y6M9 179 aa12.99□□□□□ -0.33
LDLRAD3-201ENST00000315571 ENC1O14682 589 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 UPP2O95045 317 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 NLGN2Q8NFZ4 835 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 HAUS7Q99871 368 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 FSD1Q9BTV5 496 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 ATP6V0A4Q9HBG4 840 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 INCENPQ9NQS7 918 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 SEC24CP53992 1094 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 MRPS25P82663 173 aaKnown RBP12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 ICA1Q05084 483 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 KLHL10Q6JEL2 608 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 FCHSD1Q86WN1 690 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 FAM114A1Q8IWE2 563 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 EHBP1Q8NDI1 1231 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 EVI5LQ96CN4 794 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 HPCAL4Q9UM19 191 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 GUCY1A3Q02108 690 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 MTF1Q14872 753 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 CCDC170Q8IYT3 715 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 RTKN2Q8IZC4 609 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 SH2D3CQ8N5H7 860 aa12.98□□□□□ -0.33
LDLRAD3-201ENST00000315571 GOLGA8KD6RF30 607 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 STX10O60499 249 aa12.97□□□□□ -0.33
LDLRAD3-201ENST00000315571 LGR5O75473 907 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms