RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 WASLO00401 505 aaPredicted RBP12.19□□□□□ -0.46
HDGFL3-201ENST00000299633 GPTP24298 496 aa12.19□□□□□ -0.46
HDGFL3-201ENST00000299633 GPIHBP1Q8IV16 184 aa12.19□□□□□ -0.46
HDGFL3-201ENST00000299633 SMTNP53814 917 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 ANKLE2Q86XL3 938 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 MBD2Q9UBB5 411 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 PFDN6O15212 129 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 SNX29Q8TEQ0 813 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 LZTS1Q9Y250 596 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 ESRRBO95718 433 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 BSPRYQ5W0U4 402 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 FGFR1OP2Q9NVK5 253 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 ARHGDIAP52565 204 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 CAPRIN2Q6IMN6 1127 aaKnown RBP12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 DCLK2Q8N568 766 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 COPB1P53618 953 aaKnown RBP12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 DCUN1D2Q6PH85 259 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 ARHGAP6O43182 974 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 RAB44Q7Z6P3 723 aaPredicted RBP12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 SERPINI1Q99574 410 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 LMBRD1Q9NUN5 540 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 TYW1Q9NV66 732 aaKnown RBP12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 RPS6KA1Q15418 735 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 POGZQ7Z3K3 1410 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 ARHGAP18Q8N392 663 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 NOP56O00567 594 aaKnown RBP12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 WDR47O94967 919 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 PLEKHM3Q6ZWE6 761 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 NBPF5PQ86XG9 351 aaPredicted RBP12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 ZBTB3Q9H5J0 574 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 CNOT10Q9H9A5 744 aaKnown RBP12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 ICA1LQ8NDH6 482 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 ANXA1P04083 346 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 NDEL1Q9GZM8 345 aa12.18□□□□□ -0.46
HDGFL3-201ENST00000299633 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 C4BPBP20851 252 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 LUZP2Q86TE4 346 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 PPIP5K1Q6PFW1 1433 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 KHDRBS2Q5VWX1 349 aaKnown RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 CCDC169A6NNP5 214 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 CALUO43852 315 aaPredicted RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 SCG2P13521 617 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 GEMIN8Q9NWZ8 242 aaKnown RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 DHX9Q08211 1270 aaKnown RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 MMS22LQ6ZRQ5 1243 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 C16orf71Q8IYS4 520 aaPredicted RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 DEAF1O75398 565 aaPredicted RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 SLC9C1Q4G0N8 1177 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 BRF1Q92994 677 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 NBPF26B4DH59 902 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 TRIM16O95361 564 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 MSH2P43246 934 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 NBPF14Q5TI25 921 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 NBPF15Q8N660 670 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 BBOF1Q8ND07 529 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 GRK7Q8WTQ7 553 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 C6orf50Q9HD87 102 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 SAR1BQ9Y6B6 198 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 BICRAQ9NZM4 1560 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 S100A9P06702 114 aaKnown RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 EEF1GP26641 437 aaKnown RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 RWDD3Q9Y3V2 267 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 H0Y626 953 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 VCAM1P19320 739 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 TBCCQ15814 346 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 DEPDC1Q5TB30 811 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 LRRC37BQ96QE4 947 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 G3BP2Q9UN86 482 aaKnown RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 KRT81Q14533 505 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 NOSTRINQ8IVI9 506 aa12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 ZNF277Q9NRM2 450 aaPredicted RBP12.17□□□□□ -0.46
HDGFL3-201ENST00000299633 IFIT1BQ5T764 474 aaKnown RBP12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 PYCARDQ9ULZ3 195 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 PCM1Q15154 2024 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 A0A087WUV0 522 aaPredicted RBP12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 GAS2L3Q86XJ1 694 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 STX19Q8N4C7 294 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 MAIP1Q8WWC4 291 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 RAPGEF5Q92565 580 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 KRT23Q9C075 422 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 GOLGA8IPA6NC78 632 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 WTAPQ15007 396 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 PLD3Q8IV08 490 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 KIF2CQ99661 725 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 HINFPQ9BQA5 517 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 NOC4LQ9BVI4 516 aaKnown RBP12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 TMEM63CQ9P1W3 806 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 TADA3O75528 432 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 PPP4R4Q6NUP7 873 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 ALG1Q9BT22 464 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 PHF23Q9BUL5 403 aaPredicted RBP12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 GSNP06396 782 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 CPA1P15085 419 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 SLC9A1P19634 815 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 GUCY1A3Q02108 690 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 EP400NLQ6ZTU2 488 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 ARHGEF12Q9NZN5 1544 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 DOCK7Q96N67 2140 aa12.16□□□□□ -0.46
HDGFL3-201ENST00000299633 SUPT3HO75486 399 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms