RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 KIAA1024Q9UPX6 916 aa18.94■□□□□ 0.62
SLC1A4-201ENST00000234256 LIFRP42702 1097 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 SCARF1Q14162 830 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 SH2D4AQ9H788 454 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 PANK4Q9NVE7 773 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 COMMD10Q9Y6G5 202 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 CXCR5P32302 372 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 TBC1D10BQ4KMP7 808 aaPredicted RBP18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 COA7Q96BR5 231 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 THRAP3Q9Y2W1 955 aaKnown RBP18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 USP17L3A6NCW0 530 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 USP17L4A6NCW7 530 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 RASSF7Q02833 373 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 PABPC4Q13310 644 aaKnown RBP eCLIP18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 USP17L1Q7RTZ2 530 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 NKIRAS1Q9NYS0 192 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 ENOX1Q8TC92 643 aaKnown RBP18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 FERMT1Q9BQL6 677 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 DPH5Q9H2P9 285 aa18.93■□□□□ 0.62
SLC1A4-201ENST00000234256 CDC25BP30305 580 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 TTC19Q6DKK2 380 aaPredicted RBP18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 SRGAP1Q7Z6B7 1085 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 RABGGTAQ92696 567 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 CCDC127Q96BQ5 260 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 DDX25Q9UHL0 483 aaKnown RBP18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 CEP85LQ5SZL2 805 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 CERS3Q8IU89 383 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 GPR101Q96P66 508 aaPredicted RBP18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 USP21Q9UK80 565 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 KCTD16Q68DU8 428 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 CYB5R4Q7L1T6 521 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 UBL4BQ8N7F7 174 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 TBCKQ8TEA7 893 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 SMCR8Q8TEV9 937 aaPredicted RBP18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 KIFAP3Q92845 792 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 TAF6LQ9Y6J9 622 aa18.92■□□□□ 0.62
SLC1A4-201ENST00000234256 TMEM232C9JQI7 657 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 CD19P15391 556 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 LONRF2Q1L5Z9 754 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 VSTM4Q8IW00 320 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 DDX12PQ92771 950 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 HYOU1Q9Y4L1 999 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 H0YIN7 160 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 SORBS3O60504 671 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 UBXN2AP68543 259 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 C6orf163Q5TEZ5 329 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 SPTLC3Q9NUV7 552 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 FBXO38Q6PIJ6 1188 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 STOX1Q6ZVD7 989 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 PNMA8AQ86V59 439 aaPredicted RBP18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 MRPS25P82663 173 aaKnown RBP18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 RUFY4Q6ZNE9 571 aa18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 SRPRBQ9Y5M8 271 aaKnown RBP18.91■□□□□ 0.62
SLC1A4-201ENST00000234256 CERKLQ49MI3 558 aaPredicted RBP18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 SLFN13Q68D06 897 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 KCTD1Q719H9 257 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 B4GALNT4Q76KP1 1039 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 PIGSQ96S52 555 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 SRP68Q9UHB9 627 aaKnown RBP18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 GDAQ9Y2T3 454 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 E7EVH7 732 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 GRM1Q13255 1194 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 DLGAP5Q15398 846 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 IFT74Q96LB3 600 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 MPHOSPH6Q99547 160 aaKnown RBP18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 AGTPBP1Q9UPW5 1226 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 RNF17Q9BXT8 1623 aaKnown RBP18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 KRIT1O00522 736 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 ZNF354CQ86Y25 554 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 FAM178BQ8IXR5 827 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 TCP1P17987 556 aaKnown RBP18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 ICA1Q05084 483 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 BCAS4Q8TDM0 211 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 RPGRIP1Q96KN7 1286 aa18.9■□□□□ 0.62
SLC1A4-201ENST00000234256 MADDQ8WXG6 1647 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 PPIP5K2O43314 1243 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 GNGT1P63211 74 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 GUCY2DQ02846 1103 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 MGARPQ8TDB4 240 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 OXER1Q8TDS5 423 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 LAMC1P11047 1609 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 USP27XA6NNY8 438 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 H2AFZP0C0S5 128 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 CYP2D6P10635 497 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 BCRP11274 1271 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 FAM196AQ6ZSG2 479 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 H2AFVQ71UI9 128 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 FMNL3Q8IVF7 1028 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 LARP4BQ92615 738 aaKnown RBP18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 NUCKS1Q9H1E3 243 aaKnown RBP18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 AMFRQ9UKV5 643 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 ALAS1P13196 640 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 PRDX5P30044 214 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 CDC27P30260 824 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 CLCN6P51797 869 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 DCUN1D2Q6PH85 259 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 CLEC17AQ6ZS10 378 aa18.89■□□□□ 0.61
SLC1A4-201ENST00000234256 FMR1NBQ8N0W7 255 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms