RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 SHISA4Q96DD7 197 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 FAM163AQ96GL9 167 aaPredicted RBP13.96□□□□□ -0.17
LITAF-221ENST00000622633 MED15Q96RN5 788 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 MAF1Q9H063 256 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 RNF41Q9H4P4 317 aaPredicted RBP13.96□□□□□ -0.17
LITAF-221ENST00000622633 ABCF2Q9UG63 623 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 NID2Q14112 1375 aa13.96□□□□□ -0.17
LITAF-221ENST00000622633 ECM29Q5VYK3 1845 aa13.96□□□□□ -0.18
LITAF-221ENST00000622633 ACTN4O43707 911 aaKnown RBP13.96□□□□□ -0.18
LITAF-221ENST00000622633 ZNF18P17022 549 aa13.96□□□□□ -0.18
LITAF-221ENST00000622633 TBX2Q13207 712 aaPredicted RBP13.96□□□□□ -0.18
LITAF-221ENST00000622633 SETDB1Q15047 1291 aa13.96□□□□□ -0.18
LITAF-221ENST00000622633 NT5DC1Q5TFE4 455 aa13.96□□□□□ -0.18
LITAF-221ENST00000622633 TLDC1Q6P9B6 456 aa13.96□□□□□ -0.18
LITAF-221ENST00000622633 CRACR2AQ9BSW2 395 aa13.96□□□□□ -0.18
LITAF-221ENST00000622633 SAMSN1Q9NSI8 373 aaKnown RBP13.96□□□□□ -0.18
LITAF-221ENST00000622633 VPS54Q9P1Q0 977 aa13.96□□□□□ -0.18
LITAF-221ENST00000622633 PPP2R2CQ9Y2T4 447 aa13.96□□□□□ -0.18
LITAF-221ENST00000622633 ITGB4P16144 1822 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 WTIPA6NIX2 430 aaPredicted RBP13.95□□□□□ -0.18
LITAF-221ENST00000622633 CD151P48509 253 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 CHRNDQ07001 517 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 BRD3Q15059 726 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 CCDC152Q4G0S7 254 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
LITAF-221ENST00000622633 FAM71BQ8TC56 605 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 ENOX1Q8TC92 643 aaKnown RBP13.95□□□□□ -0.18
LITAF-221ENST00000622633 TSPAN18Q96SJ8 248 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 FAM204AQ9H8W3 233 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 NUP98P52948 1817 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 PRDM1O75626 825 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 PEX19P40855 299 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 CCT5P48643 541 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 EARS2Q5JPH6 523 aaKnown RBP13.95□□□□□ -0.18
LITAF-221ENST00000622633 HDXQ7Z353 690 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 AMOTL1Q8IY63 956 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 RABGGTAQ92696 567 aa13.95□□□□□ -0.18
LITAF-221ENST00000622633 TNKSO95271 1327 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 CYP2D7A0A087X1C5 515 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 VWA3AA6NCI4 1184 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 ARHGAP6O43182 974 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 ZSCAN12O43309 604 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 PHACTR2O75167 634 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 NAP1L1P55209 391 aaKnown RBP13.94□□□□□ -0.18
LITAF-221ENST00000622633 AKAP17AQ02040 695 aaKnown RBP13.94□□□□□ -0.18
LITAF-221ENST00000622633 SEC23AQ15436 765 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 SPECC1LQ69YQ0 1117 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 SPDYE1Q8NFV5 336 aaPredicted RBP13.94□□□□□ -0.18
LITAF-221ENST00000622633 DHX58Q96C10 678 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 EPSTI1Q96J88 318 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 BLOC1S6Q9UL45 172 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 CEP131Q9UPN4 1083 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 ABCA3Q99758 1704 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 ANKRD36CQ5JPF3 1778 aa13.94□□□□□ -0.18
LITAF-221ENST00000622633 A0A087X0B3 334 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 EBAG9O00559 213 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 IBSPP21815 317 aaPredicted RBP13.93□□□□□ -0.18
LITAF-221ENST00000622633 CASP1P29466 404 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 AFMP43652 599 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 CRKLP46109 303 aaKnown RBP13.93□□□□□ -0.18
LITAF-221ENST00000622633 GYG1P46976 350 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 MAP3K9P80192 1104 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 PDIA5Q14554 519 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 TOGARAM2Q6ZUX3 1019 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 TC2NQ8N9U0 490 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 HNRNPLLQ8WVV9 542 aaKnown RBP13.93□□□□□ -0.18
LITAF-221ENST00000622633 ESR2Q92731 530 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 CCDC87Q9NVE4 849 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 DDX20Q9UHI6 824 aaKnown RBP13.93□□□□□ -0.18
LITAF-221ENST00000622633 DACH1Q9UI36 760 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 NIP7Q9Y221 180 aaKnown RBP eCLIP13.93□□□□□ -0.18
LITAF-221ENST00000622633 TRIM75PA6NK02 468 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 CAMTA2O94983 1202 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 PDE6BP35913 854 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 PKN1Q16512 942 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 HHATQ5VTY9 493 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 FCHSD1Q86WN1 690 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 GOPCQ9HD26 462 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 PICK1Q9NRD5 415 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 V9GY48 417 aaPredicted RBP13.93□□□□□ -0.18
LITAF-221ENST00000622633 DISP2A7MBM2 1401 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 LRP5O75197 1615 aa13.93□□□□□ -0.18
LITAF-221ENST00000622633 ENO4A6NNW6 628 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 POLD1P28340 1107 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 GNG11P61952 73 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 DYNLL1P63167 89 aaKnown RBP13.92□□□□□ -0.18
LITAF-221ENST00000622633 KLHL10Q6JEL2 608 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 KANK3Q6NY19 840 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 NUTM2AQ8IVF1 878 aaPredicted RBP13.92□□□□□ -0.18
LITAF-221ENST00000622633 ENAHQ8N8S7 591 aaPredicted RBP13.92□□□□□ -0.18
LITAF-221ENST00000622633 SAAL1Q96ER3 474 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 MTA3Q9BTC8 594 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 MMTAG2Q9BU76 263 aaKnown RBP13.92□□□□□ -0.18
LITAF-221ENST00000622633 RNF26Q9BY78 433 aaPredicted RBP13.92□□□□□ -0.18
LITAF-221ENST00000622633 L1RE1Q9UN81 338 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 WNT7AO00755 349 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 PLEKHA8P1O95397 391 aa13.92□□□□□ -0.18
LITAF-221ENST00000622633 PYGBP11216 843 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms