RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 CCDC17Q96LX7 622 aa17.6■□□□□ 0.41
TMCO3-209ENST00000619336 THEGQ9P2T0 379 aa17.6■□□□□ 0.41
TMCO3-209ENST00000619336 FAM184BQ9ULE4 1060 aa17.6■□□□□ 0.41
TMCO3-209ENST00000619336 MCM3APO60318 1980 aa17.6■□□□□ 0.41
TMCO3-209ENST00000619336 GBF1Q92538 1859 aa17.59■□□□□ 0.41
TMCO3-209ENST00000619336 SNAI1O95863 264 aaPredicted RBP17.59■□□□□ 0.41
TMCO3-209ENST00000619336 ACRP10323 421 aa17.59■□□□□ 0.41
TMCO3-209ENST00000619336 CSF2RAP15509 400 aa17.59■□□□□ 0.41
TMCO3-209ENST00000619336 CCDC85BQ15834 202 aaPredicted RBP17.59■□□□□ 0.41
TMCO3-209ENST00000619336 ATXN2LQ8WWM7 1075 aaKnown RBP17.59■□□□□ 0.41
TMCO3-209ENST00000619336 GLT1D1Q96MS3 346 aa17.59■□□□□ 0.41
TMCO3-209ENST00000619336 PPP1R12CQ9BZL4 782 aa17.59■□□□□ 0.41
TMCO3-209ENST00000619336 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
TMCO3-209ENST00000619336 GOPCQ9HD26 462 aa17.59■□□□□ 0.41
TMCO3-209ENST00000619336 MROH7Q68CQ1 1323 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 SYNGAP1Q96PV0 1343 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 ADCY6O43306 1168 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 C6orf222P0C671 652 aaPredicted RBP17.58■□□□□ 0.4
TMCO3-209ENST00000619336 COPB2P35606 906 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 ADGRE1Q14246 886 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 AKNAD1Q5T1N1 836 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 C12orf60Q5U649 245 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 RASIP1Q5U651 963 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 C16orf86Q6ZW13 317 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 ADAMTS19Q8TE59 1207 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 VTI1AQ96AJ9 217 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 ASB2Q96Q27 587 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 NUP88Q99567 741 aaPredicted RBP17.58■□□□□ 0.4
TMCO3-209ENST00000619336 ATP8A2Q9NTI2 1148 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 CHD7Q9P2D1 2997 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 BDP1A6H8Y1 2624 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 NCOR1O75376 2440 aa17.58■□□□□ 0.4
TMCO3-209ENST00000619336 ELP1O95163 1332 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 USP17L12C9JPN9 530 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 USP17L21D6R901 530 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 APBB1O00213 710 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 DUSP11O75319 330 aaKnown RBP17.57■□□□□ 0.4
TMCO3-209ENST00000619336 ASGR1P07306 291 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 SLC4A3P48751 1232 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 CDK7P50613 346 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 SNRNP48Q6IEG0 339 aaKnown RBP17.57■□□□□ 0.4
TMCO3-209ENST00000619336 CCDC174Q6PII3 467 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 ZNF365Q70YC5 407 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 MSL3Q8N5Y2 521 aaKnown RBP17.57■□□□□ 0.4
TMCO3-209ENST00000619336 RHPN1Q8TCX5 695 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 DDX11Q96FC9 970 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 TEX13BQ9BXU2 312 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 KANSL2Q9H9L4 492 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 RIPK3Q9Y572 518 aa17.57■□□□□ 0.4
TMCO3-209ENST00000619336 REV3LO60673 3130 aa17.56■□□□□ 0.4
TMCO3-209ENST00000619336 DNAJC25-GNG10A0A024R161 153 aa17.56■□□□□ 0.4
TMCO3-209ENST00000619336 CHGBP05060 677 aa17.56■□□□□ 0.4
TMCO3-209ENST00000619336 IGFBP4P22692 258 aa17.56■□□□□ 0.4
TMCO3-209ENST00000619336 CST5P28325 142 aaPredicted RBP17.56■□□□□ 0.4
TMCO3-209ENST00000619336 ADD2P35612 726 aa17.56■□□□□ 0.4
TMCO3-209ENST00000619336 PSRC1Q6PGN9 363 aaPredicted RBP17.56■□□□□ 0.4
TMCO3-209ENST00000619336 MAMDC4Q6UXC1 1216 aa17.56■□□□□ 0.4
TMCO3-209ENST00000619336 AMOTL1Q8IY63 956 aa17.56■□□□□ 0.4
TMCO3-209ENST00000619336 TMEM199Q8N511 208 aa17.56■□□□□ 0.4
TMCO3-209ENST00000619336 SLF1Q9BQI6 1058 aa17.56■□□□□ 0.4
TMCO3-209ENST00000619336 GREB1LQ9C091 1923 aaPredicted RBP17.56■□□□□ 0.4
TMCO3-209ENST00000619336 MYH7P12883 1935 aa17.55■□□□□ 0.4
TMCO3-209ENST00000619336 A0A0U1RQG5 324 aaPredicted RBP17.55■□□□□ 0.4
TMCO3-209ENST00000619336 ARVCFO00192 962 aa17.55■□□□□ 0.4
TMCO3-209ENST00000619336 CYP2C18P33260 490 aa17.55■□□□□ 0.4
TMCO3-209ENST00000619336 MRPS5P82675 430 aaKnown RBP17.55■□□□□ 0.4
TMCO3-209ENST00000619336 ACVR2BQ13705 512 aa17.55■□□□□ 0.4
TMCO3-209ENST00000619336 FAM126BQ8IXS8 530 aa17.55■□□□□ 0.4
TMCO3-209ENST00000619336 PCSK9Q8NBP7 692 aaKnown RBP17.55■□□□□ 0.4
TMCO3-209ENST00000619336 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
TMCO3-209ENST00000619336 UHRF1Q96T88 793 aaPredicted RBP17.55■□□□□ 0.4
TMCO3-209ENST00000619336 NKX2-4Q9H2Z4 354 aa17.55■□□□□ 0.4
TMCO3-209ENST00000619336 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.55■□□□□ 0.4
TMCO3-209ENST00000619336 TCF20Q9UGU0 1960 aaKnown RBP17.54■□□□□ 0.4
TMCO3-209ENST00000619336 CCDC144BQ3MJ40 725 aa17.54■□□□□ 0.4
TMCO3-209ENST00000619336 GNASQ5JWF2 1037 aa17.54■□□□□ 0.4
TMCO3-209ENST00000619336 CPXCR1Q8N123 301 aa17.54■□□□□ 0.4
TMCO3-209ENST00000619336 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
TMCO3-209ENST00000619336 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.54■□□□□ 0.4
TMCO3-209ENST00000619336 UPF3AQ9H1J1 476 aaKnown RBP17.54■□□□□ 0.4
TMCO3-209ENST00000619336 SPC25Q9HBM1 224 aa17.54■□□□□ 0.4
TMCO3-209ENST00000619336 PAG1Q9NWQ8 432 aa17.54■□□□□ 0.4
TMCO3-209ENST00000619336 CXXC1Q9P0U4 656 aaPredicted RBP17.54■□□□□ 0.4
TMCO3-209ENST00000619336 MSRAQ9UJ68 235 aa17.54■□□□□ 0.4
TMCO3-209ENST00000619336 TLR3O15455 904 aaKnown RBP17.53■□□□□ 0.4
TMCO3-209ENST00000619336 IFIT2P09913 472 aaKnown RBP17.53■□□□□ 0.4
TMCO3-209ENST00000619336 GJA9P57773 515 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 RAB30Q15771 203 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 HSP90AB4PQ58FF6 505 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 CTR9Q6PD62 1173 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 ZNF467Q7Z7K2 595 aaPredicted RBP17.53■□□□□ 0.4
TMCO3-209ENST00000619336 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 DDRGK1Q96HY6 314 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 FGD4Q96M96 766 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 BOLA2Q9H3K6 86 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 IL23AQ9NPF7 189 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 YBX2Q9Y2T7 364 aaKnown RBP17.53■□□□□ 0.4
TMCO3-209ENST00000619336 SLC4A4Q9Y6R1 1079 aa17.53■□□□□ 0.4
TMCO3-209ENST00000619336 BEX3Q00994 111 aa17.52■□□□□ 0.4
TMCO3-209ENST00000619336 STK11IPQ8N1F8 1099 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms