RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PLA2G4DQ86XP0 818 aa15.06■□□□□ 0
CHD1-212ENST00000614616 BAG3O95817 575 aa15.06■□□□□ 0
CHD1-212ENST00000614616 PFKFB1P16118 471 aa15.06■□□□□ 0
CHD1-212ENST00000614616 PDE6CP51160 858 aa15.06■□□□□ 0
CHD1-212ENST00000614616 SPATA1Q5VX52 437 aa15.06■□□□□ 0
CHD1-212ENST00000614616 PBKQ96KB5 322 aa15.06■□□□□ 0
CHD1-212ENST00000614616 EPN3Q9H201 632 aa15.06■□□□□ 0
CHD1-212ENST00000614616 hCG_2014768A0A024R1R8 64 aa15.06■□□□□ 0
CHD1-212ENST00000614616 HEXIM1O94992 359 aaKnown RBP15.06■□□□□ 0
CHD1-212ENST00000614616 ADCY8P40145 1251 aa15.06■□□□□ 0
CHD1-212ENST00000614616 TMEM87BQ96K49 555 aa15.06■□□□□ 0
CHD1-212ENST00000614616 DKC1O60832 514 aaKnown RBP eCLIP15.05■□□□□ 0
CHD1-212ENST00000614616 MMEP08473 750 aa15.05■□□□□ 0
CHD1-212ENST00000614616 PACSIN2Q9UNF0 486 aaPredicted RBP15.05■□□□□ 0
CHD1-212ENST00000614616 BUB1O43683 1085 aa15.05■□□□□ 0
CHD1-212ENST00000614616 C10orf76Q5T2E6 689 aa15.05■□□□□ 0
CHD1-212ENST00000614616 CCDC138Q96M89 665 aa15.05■□□□□ 0
CHD1-212ENST00000614616 KIF2CQ99661 725 aa15.05■□□□□ 0
CHD1-212ENST00000614616 MTMR6Q9Y217 621 aa15.05■□□□□ 0
CHD1-212ENST00000614616 CCNT1O60563 726 aaKnown RBP15.05■□□□□ -0
CHD1-212ENST00000614616 FAM173BQ6P4H8 233 aa15.05■□□□□ -0
CHD1-212ENST00000614616 SARM1Q6SZW1 724 aa15.05■□□□□ -0
CHD1-212ENST00000614616 STK24Q9Y6E0 443 aa15.05■□□□□ -0
CHD1-212ENST00000614616 GYG2O15488 501 aa15.05■□□□□ -0
CHD1-212ENST00000614616 SNX1Q13596 522 aa15.05■□□□□ -0
CHD1-212ENST00000614616 LRRC37BQ96QE4 947 aa15.05■□□□□ -0
CHD1-212ENST00000614616 TMEM60Q9H2L4 133 aa15.05■□□□□ -0
CHD1-212ENST00000614616 SCHIP1Q9P0W5 487 aaPredicted RBP15.05■□□□□ -0
CHD1-212ENST00000614616 BZW2Q9Y6E2 419 aaKnown RBP15.05■□□□□ -0
CHD1-212ENST00000614616 EEF1B2P24534 225 aaKnown RBP15.05■□□□□ -0
CHD1-212ENST00000614616 ECT2Q9H8V3 914 aa15.05■□□□□ -0
CHD1-212ENST00000614616 LAMC1P11047 1609 aa15.05■□□□□ -0
CHD1-212ENST00000614616 RNF113AO15541 343 aaKnown RBP15.05■□□□□ -0
CHD1-212ENST00000614616 ZNF174Q15697 407 aa15.05■□□□□ -0
CHD1-212ENST00000614616 UBE3BQ7Z3V4 1068 aa15.05■□□□□ -0
CHD1-212ENST00000614616 RETREG2Q8NC44 543 aa15.05■□□□□ -0
CHD1-212ENST00000614616 KIFC2Q96AC6 838 aa15.05■□□□□ -0
CHD1-212ENST00000614616 ZNF653Q96CK0 615 aa15.05■□□□□ -0
CHD1-212ENST00000614616 ATP8A1Q9Y2Q0 1164 aa15.05■□□□□ -0
CHD1-212ENST00000614616 ATF2P15336 505 aa15.04■□□□□ -0
CHD1-212ENST00000614616 NXNQ6DKJ4 435 aa15.04■□□□□ -0
CHD1-212ENST00000614616 CMA1P23946 247 aa15.04■□□□□ -0
CHD1-212ENST00000614616 RPS6KA2Q15349 733 aa15.04■□□□□ -0
CHD1-212ENST00000614616 TMEM87AQ8NBN3 555 aa15.04■□□□□ -0
CHD1-212ENST00000614616 TTLL11Q8NHH1 800 aa15.04■□□□□ -0
CHD1-212ENST00000614616 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
CHD1-212ENST00000614616 ENC1O14682 589 aa15.04■□□□□ -0
CHD1-212ENST00000614616 CCDC124Q96CT7 223 aaKnown RBP15.04■□□□□ -0
CHD1-212ENST00000614616 KIFC3Q9BVG8 833 aa15.04■□□□□ -0
CHD1-212ENST00000614616 FAM207AQ9NSI2 230 aaPredicted RBP15.04■□□□□ -0
CHD1-212ENST00000614616 ZNF652Q9Y2D9 606 aa15.04■□□□□ -0
CHD1-212ENST00000614616 IFT122Q9HBG6 1241 aa15.04■□□□□ -0
CHD1-212ENST00000614616 REREQ9P2R6 1566 aa15.04■□□□□ -0
CHD1-212ENST00000614616 ESRRBO95718 433 aa15.04■□□□□ -0
CHD1-212ENST00000614616 RSAD2Q8WXG1 361 aa15.04■□□□□ -0
CHD1-212ENST00000614616 FAM167BQ9BTA0 163 aa15.04■□□□□ -0
CHD1-212ENST00000614616 CD2APQ9Y5K6 639 aa15.04■□□□□ -0
CHD1-212ENST00000614616 ESRRAP11474 423 aaPredicted RBP15.04■□□□□ -0
CHD1-212ENST00000614616 PDCLQ13371 301 aa15.04■□□□□ -0
CHD1-212ENST00000614616 NBPF20Q3BBV1 942 aa15.04■□□□□ -0
CHD1-212ENST00000614616 TARSL2A2RTX5 802 aaKnown RBP15.03■□□□□ -0
CHD1-212ENST00000614616 PFKFB2O60825 505 aa15.03■□□□□ -0
CHD1-212ENST00000614616 NLRP14Q86W24 1093 aa15.03■□□□□ -0
CHD1-212ENST00000614616 MCF2L2Q86YR7 1114 aa15.03■□□□□ -0
CHD1-212ENST00000614616 WDR44Q5JSH3 913 aa15.03■□□□□ -0
CHD1-212ENST00000614616 LONP1P36776 959 aaKnown RBP15.03■□□□□ -0
CHD1-212ENST00000614616 ZMYND12Q9H0C1 365 aa15.03■□□□□ -0
CHD1-212ENST00000614616 VIPAS39Q9H9C1 493 aa15.03■□□□□ -0
CHD1-212ENST00000614616 ANKRD2Q9GZV1 360 aa15.03■□□□□ -0
CHD1-212ENST00000614616 DPH5Q9H2P9 285 aa15.03■□□□□ -0
CHD1-212ENST00000614616 SYF2O95926 243 aaKnown RBP15.03■□□□□ -0
CHD1-212ENST00000614616 SLC44A4Q53GD3 710 aa15.03■□□□□ -0
CHD1-212ENST00000614616 RSBN1LQ6PCB5 846 aaPredicted RBP15.03■□□□□ -0
CHD1-212ENST00000614616 SLC4A4Q9Y6R1 1079 aa15.03■□□□□ -0
CHD1-212ENST00000614616 CTIFO43310 598 aaKnown RBP15.03■□□□□ -0
CHD1-212ENST00000614616 MRPS35P82673 323 aaKnown RBP15.03■□□□□ -0
CHD1-212ENST00000614616 RBL2Q08999 1139 aa15.03■□□□□ -0
CHD1-212ENST00000614616 NCAPH2Q6IBW4 605 aa15.03■□□□□ -0
CHD1-212ENST00000614616 SOWAHDA6NJG2 315 aa15.02■□□□□ -0
CHD1-212ENST00000614616 SKOR1P84550 965 aa15.02■□□□□ -0
CHD1-212ENST00000614616 GRAMD1BQ3KR37 738 aa15.02■□□□□ -0
CHD1-212ENST00000614616 STX8Q9UNK0 236 aa15.02■□□□□ -0
CHD1-212ENST00000614616 TNNQ9UQP3 1299 aa15.02■□□□□ -0
CHD1-212ENST00000614616 RAD23BP54727 409 aa15.02■□□□□ -0
CHD1-212ENST00000614616 CASC4Q6P4E1 433 aa15.02■□□□□ -0
CHD1-212ENST00000614616 VAMP4O75379 141 aa15.02■□□□□ -0
CHD1-212ENST00000614616 TRAIPQ9BWF2 469 aa15.02■□□□□ -0
CHD1-212ENST00000614616 TBC1D23Q9NUY8 699 aa15.02■□□□□ -0
CHD1-212ENST00000614616 SLC52A1Q9NWF4 448 aa15.02■□□□□ -0
CHD1-212ENST00000614616 CCDC61Q9Y6R9 512 aa15.02■□□□□ -0
CHD1-212ENST00000614616 RIMS2Q9UQ26 1411 aa15.02■□□□□ -0
CHD1-212ENST00000614616 SNUPNO95149 360 aaKnown RBP15.02□□□□□ -0.01
CHD1-212ENST00000614616 LSM14BQ9BX40 385 aaKnown RBP15.02□□□□□ -0.01
CHD1-212ENST00000614616 SH3BP5O60239 455 aa15.02□□□□□ -0.01
CHD1-212ENST00000614616 SCP2P22307 547 aa15.02□□□□□ -0.01
CHD1-212ENST00000614616 VSTM4Q8IW00 320 aa15.02□□□□□ -0.01
CHD1-212ENST00000614616 THOC1Q96FV9 657 aaKnown RBP15.02□□□□□ -0.01
CHD1-212ENST00000614616 KIF9Q9HAQ2 790 aa15.02□□□□□ -0.01
CHD1-212ENST00000614616 POLKQ9UBT6 870 aa15.02□□□□□ -0.01
CHD1-212ENST00000614616 PLAAQ9Y263 795 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms