RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 SNRNP48Q6IEG0 339 aaKnown RBP16.98■□□□□ 0.31
TUBE1-208ENST00000604743 REPS2Q8NFH8 660 aa16.98■□□□□ 0.31
TUBE1-208ENST00000604743 NPLOC4Q8TAT6 608 aa16.98■□□□□ 0.31
TUBE1-208ENST00000604743 GMCL1Q96IK5 515 aa16.98■□□□□ 0.31
TUBE1-208ENST00000604743 DEFB118Q96PH6 123 aa16.98■□□□□ 0.31
TUBE1-208ENST00000604743 RAVER2Q9HCJ3 691 aaKnown RBP16.98■□□□□ 0.31
TUBE1-208ENST00000604743 ZNF214Q9UL59 606 aaPredicted RBP16.98■□□□□ 0.31
TUBE1-208ENST00000604743 PLXNA1Q9UIW2 1896 aa16.97■□□□□ 0.31
TUBE1-208ENST00000604743 STRNO43815 780 aa16.97■□□□□ 0.31
TUBE1-208ENST00000604743 FCER1AP12319 257 aa16.97■□□□□ 0.31
TUBE1-208ENST00000604743 PRKAR2AP13861 404 aaKnown RBP16.97■□□□□ 0.31
TUBE1-208ENST00000604743 NOVP48745 357 aa16.97■□□□□ 0.31
TUBE1-208ENST00000604743 RCSD1Q6JBY9 416 aa16.97■□□□□ 0.31
TUBE1-208ENST00000604743 RIOX2Q8IUF8 465 aa16.97■□□□□ 0.31
TUBE1-208ENST00000604743 TRMT44Q8IYL2 757 aaKnown RBP16.97■□□□□ 0.31
TUBE1-208ENST00000604743 U2AF1L4Q8WU68 220 aaKnown RBP16.97■□□□□ 0.31
TUBE1-208ENST00000604743 CHURC1Q8WUH1 139 aa16.97■□□□□ 0.31
TUBE1-208ENST00000604743 MMP19Q99542 508 aa16.97■□□□□ 0.31
TUBE1-208ENST00000604743 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.97■□□□□ 0.31
TUBE1-208ENST00000604743 HMX1Q9NP08 348 aaPredicted RBP16.97■□□□□ 0.31
TUBE1-208ENST00000604743 FLRT1Q9NZU1 646 aa16.97■□□□□ 0.31
TUBE1-208ENST00000604743 FRMPD2Q68DX3 1309 aaPredicted RBP16.96■□□□□ 0.31
TUBE1-208ENST00000604743 RPTORQ8N122 1335 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 TFRCP02786 760 aaKnown RBP16.96■□□□□ 0.31
TUBE1-208ENST00000604743 GJA8P48165 433 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 SNAP25P60880 206 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 CACNB2Q08289 660 aaPredicted RBP16.96■□□□□ 0.31
TUBE1-208ENST00000604743 FAM160B2Q86V87 743 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 IQCA1Q86XH1 822 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 DCAF4Q8WV16 495 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 SHISA4Q96DD7 197 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 TEX13BQ9BXU2 312 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 KRT23Q9C075 422 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 GPCPD1Q9NPB8 672 aa16.96■□□□□ 0.31
TUBE1-208ENST00000604743 U3KPZ7 1027 aaPredicted RBP16.96■□□□□ 0.31
TUBE1-208ENST00000604743 COBLO75128 1261 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 SGPL1O95470 568 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 KCTD2Q14681 263 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 TTBK2Q6IQ55 1244 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 KIAA1211Q6ZU35 1233 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 TTC14Q96N46 770 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 CNNM2Q9H8M5 875 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 SLC38A10Q9HBR0 1119 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 PAK6Q9NQU5 681 aaPredicted RBP16.95■□□□□ 0.3
TUBE1-208ENST00000604743 ZSWIM5Q9P217 1185 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 RIPK3Q9Y572 518 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 SMCHD1A6NHR9 2005 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 ZNF236Q9UL36 1845 aa16.95■□□□□ 0.3
TUBE1-208ENST00000604743 PGK2P07205 417 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 CYP21A2P08686 494 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 CYP2C19P33261 490 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 COPB2P35606 906 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 SLC16A2P36021 539 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 TRDNQ13061 729 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 BMP2KLQ5H9B9 411 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 MFSD14CQ5VZR4 134 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 CCDC174Q6PII3 467 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 ZSCAN10Q96SZ4 725 aaPredicted RBP16.94■□□□□ 0.3
TUBE1-208ENST00000604743 ESYT1Q9BSJ8 1104 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 HOMER2Q9NSB8 354 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 SLC5A4Q9NY91 659 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 PRR12Q9ULL5 1215 aa16.94■□□□□ 0.3
TUBE1-208ENST00000604743 HOXC6P09630 235 aa16.93■□□□□ 0.3
TUBE1-208ENST00000604743 CCND3P30281 292 aaPredicted RBP16.93■□□□□ 0.3
TUBE1-208ENST00000604743 CCDC178Q5BJE1 867 aa16.93■□□□□ 0.3
TUBE1-208ENST00000604743 DGKHQ86XP1 1220 aa16.93■□□□□ 0.3
TUBE1-208ENST00000604743 ABRAQ8N0Z2 381 aa16.93■□□□□ 0.3
TUBE1-208ENST00000604743 MAP4K1Q92918 833 aa16.93■□□□□ 0.3
TUBE1-208ENST00000604743 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
TUBE1-208ENST00000604743 KAT14Q9H8E8 782 aa16.93■□□□□ 0.3
TUBE1-208ENST00000604743 RBM8AQ9Y5S9 174 aaKnown RBP16.93■□□□□ 0.3
TUBE1-208ENST00000604743 TNKSO95271 1327 aa16.93■□□□□ 0.3
TUBE1-208ENST00000604743 MKI67P46013 3256 aaKnown RBP16.92■□□□□ 0.3
TUBE1-208ENST00000604743 FDX1P10109 184 aa16.92■□□□□ 0.3
TUBE1-208ENST00000604743 PDHBP11177 359 aa16.92■□□□□ 0.3
TUBE1-208ENST00000604743 CNGA1P29973 690 aa16.92■□□□□ 0.3
TUBE1-208ENST00000604743 MAP3K21Q5TCX8 1036 aa16.92■□□□□ 0.3
TUBE1-208ENST00000604743 CYB5R4Q7L1T6 521 aa16.92■□□□□ 0.3
TUBE1-208ENST00000604743 DDX11Q96FC9 970 aa16.92■□□□□ 0.3
TUBE1-208ENST00000604743 AGBL1Q96MI9 1066 aa16.92■□□□□ 0.3
TUBE1-208ENST00000604743 ANO2Q9NQ90 1003 aa16.92■□□□□ 0.3
TUBE1-208ENST00000604743 TAF6LQ9Y6J9 622 aa16.92■□□□□ 0.3
TUBE1-208ENST00000604743 ATP2A1O14983 1001 aa16.91■□□□□ 0.3
TUBE1-208ENST00000604743 PLA2G6O60733 806 aa16.91■□□□□ 0.3
TUBE1-208ENST00000604743 GOLGA8HP0CJ92 632 aa16.91■□□□□ 0.3
TUBE1-208ENST00000604743 NT5C2P49902 561 aa16.91■□□□□ 0.3
TUBE1-208ENST00000604743 OAZ1P54368 228 aa16.91■□□□□ 0.3
TUBE1-208ENST00000604743 SYDE2Q5VT97 1194 aa16.91■□□□□ 0.3
TUBE1-208ENST00000604743 RALYLQ86SE5 291 aaKnown RBP16.91■□□□□ 0.3
TUBE1-208ENST00000604743 ENAHQ8N8S7 591 aaPredicted RBP16.91■□□□□ 0.3
TUBE1-208ENST00000604743 PNMA1Q8ND90 353 aa16.91■□□□□ 0.3
TUBE1-208ENST00000604743 MAML3Q96JK9 1138 aa16.91■□□□□ 0.3
TUBE1-208ENST00000604743 LSG1Q9H089 658 aaKnown RBP16.91■□□□□ 0.3
TUBE1-208ENST00000604743 MYH6P13533 1939 aa16.9■□□□□ 0.3
TUBE1-208ENST00000604743 E7EWF7 191 aa16.9■□□□□ 0.3
TUBE1-208ENST00000604743 FARP2O94887 1054 aaPredicted RBP16.9■□□□□ 0.3
TUBE1-208ENST00000604743 ALAS1P13196 640 aa16.9■□□□□ 0.3
TUBE1-208ENST00000604743 ZNF543Q08ER8 600 aa16.9■□□□□ 0.3
TUBE1-208ENST00000604743 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
TUBE1-208ENST00000604743 OLFML2BQ68BL8 750 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms