RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 TRIM49BA6NDI0 452 aa22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 TXLNAP40222 546 aa22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 SLC35G1Q2M3R5 365 aa22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 C12orf60Q5U649 245 aa22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 DISC1Q9NRI5 854 aa22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 RMND1Q9NWS8 449 aa22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 PUF60Q9UHX1 559 aaKnown RBP22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 NAALADL2Q58DX5 795 aa22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 NYXQ9GZU5 481 aa22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 TMEM60Q9H2L4 133 aa22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 MKRN1Q9UHC7 482 aaKnown RBP22.82■■□□□ 1.24
SHKBP1-225ENST00000600733 USP5P45974 858 aa22.81■■□□□ 1.24
SHKBP1-225ENST00000600733 CHMP4BP1P59074 171 aa22.81■■□□□ 1.24
SHKBP1-225ENST00000600733 SPAG1Q07617 926 aa22.81■■□□□ 1.24
SHKBP1-225ENST00000600733 BARGINQ6ZT62 677 aa22.81■■□□□ 1.24
SHKBP1-225ENST00000600733 DGKHQ86XP1 1220 aa22.81■■□□□ 1.24
SHKBP1-225ENST00000600733 PLIN2Q99541 437 aa22.81■■□□□ 1.24
SHKBP1-225ENST00000600733 MAD2L2Q9UI95 211 aa22.81■■□□□ 1.24
SHKBP1-225ENST00000600733 CCDC194A0A1B0GVG4 234 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 M0R2N6 131 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 TFRCP02786 760 aaKnown RBP22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 TMTC1Q8IUR5 882 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 ANKRD20A12PQ8NF67 263 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 RASSF8Q8NHQ8 419 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 SH3RF3Q8TEJ3 882 aaPredicted RBP22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 SH3GLB2Q9NR46 395 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 CYTH3O43739 400 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 UBXN1Q04323 297 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 INF2Q27J81 1249 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 WWC2Q6AWC2 1192 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 DTHD1Q6ZMT9 781 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 SRGAP1Q7Z6B7 1085 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 IRF2BP1Q8IU81 584 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 SLC35F6Q8N357 371 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 SLC44A5Q8NCS7 719 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 NARFQ9UHQ1 456 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 CDC23Q9UJX2 597 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 PCDHA6Q9UN73 950 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 PCDHA8Q9Y5H6 950 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 CNTNAP4Q9C0A0 1308 aa22.8■■□□□ 1.24
SHKBP1-225ENST00000600733 PMS1P54277 932 aaKnown RBP22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 GRM4Q14833 912 aa22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 KIF4BQ2VIQ3 1234 aa22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 HEATR3Q7Z4Q2 680 aa22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 MKNK2Q9HBH9 465 aa22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 ARFGAP3Q9NP61 516 aa22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 TTF2Q9UNY4 1162 aaKnown RBP22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 KRT9P35527 623 aa22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 DIXDC1Q155Q3 683 aa22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 IRS2Q9Y4H2 1338 aa22.79■■□□□ 1.24
SHKBP1-225ENST00000600733 POLR3GO15318 223 aaPredicted RBP22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 TM4SF1P30408 202 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 GRIK5Q16478 980 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 FAM98CQ17RN3 349 aaKnown RBP22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 CYP26C1Q6V0L0 522 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 ADSSL1Q8N142 457 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 CTAGE9A4FU28 777 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 ATP8B1O43520 1251 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 PARP1P09874 1014 aaKnown RBP22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 TSPY3P0CV98 308 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 TSPY8P0CW00 308 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 SPTY2D1Q68D10 685 aaPredicted RBP22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 CHP1Q99653 195 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 SLF1Q9BQI6 1058 aa22.78■■□□□ 1.24
SHKBP1-225ENST00000600733 ERICH4A6NGS2 130 aa22.77■■□□□ 1.24
SHKBP1-225ENST00000600733 LDHBP07195 334 aaKnown RBP22.77■■□□□ 1.24
SHKBP1-225ENST00000600733 ARHGAP25P42331 645 aa22.77■■□□□ 1.24
SHKBP1-225ENST00000600733 LRRC15Q8TF66 581 aa22.77■■□□□ 1.24
SHKBP1-225ENST00000600733 STX8Q9UNK0 236 aa22.77■■□□□ 1.24
SHKBP1-225ENST00000600733 H7C1D1 291 aa22.77■■□□□ 1.23
SHKBP1-225ENST00000600733 GOLGA8HP0CJ92 632 aa22.77■■□□□ 1.23
SHKBP1-225ENST00000600733 TPTE2Q6XPS3 522 aa22.77■■□□□ 1.23
SHKBP1-225ENST00000600733 AMIGO3Q86WK7 504 aa22.77■■□□□ 1.23
SHKBP1-225ENST00000600733 ANKS1AQ92625 1134 aa22.77■■□□□ 1.23
SHKBP1-225ENST00000600733 CPVLQ9H3G5 476 aa22.77■■□□□ 1.23
SHKBP1-225ENST00000600733 STXBP3O00186 592 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 GNPATO15228 680 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 ZPR1O75312 459 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 UBA7P41226 1012 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 TRIM14Q14142 442 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 TGFBRAP1Q8WUH2 860 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 FUT8Q9BYC5 575 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 UBXN6Q9BZV1 441 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 ANKZF1Q9H8Y5 726 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 ANKIB1Q9P2G1 1089 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 ZNF831Q5JPB2 1677 aa22.76■■□□□ 1.23
SHKBP1-225ENST00000600733 PES1O00541 588 aaKnown RBP22.75■■□□□ 1.23
SHKBP1-225ENST00000600733 KLRC4O43908 158 aa22.75■■□□□ 1.23
SHKBP1-225ENST00000600733 ZCCHC17Q9NP64 241 aaKnown RBP22.75■■□□□ 1.23
SHKBP1-225ENST00000600733 BARHL2Q9NY43 387 aa22.75■■□□□ 1.23
SHKBP1-225ENST00000600733 TTC26A0AVF1 554 aa22.75■■□□□ 1.23
SHKBP1-225ENST00000600733 GNAQP50148 359 aa22.75■■□□□ 1.23
SHKBP1-225ENST00000600733 CEP112Q8N8E3 955 aa22.75■■□□□ 1.23
SHKBP1-225ENST00000600733 SAP30BPQ9UHR5 308 aaKnown RBP22.75■■□□□ 1.23
SHKBP1-225ENST00000600733 COL24A1Q17RW2 1714 aa22.75■■□□□ 1.23
SHKBP1-225ENST00000600733 CCDC148Q8NFR7 591 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 EEF2KMTQ96G04 330 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 TMEM47Q9BQJ4 181 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 CCDC151A5D8V7 595 aa22.74■■□□□ 1.23
SHKBP1-225ENST00000600733 RPS6KA4O75676 772 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms