RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 ADGRA2Q96PE1 1338 aa23.33■■□□□ 1.32
SHKBP1-222ENST00000600320 KLRF2D3W0D1 207 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 PEX10O60683 326 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 PLA2G6O60733 806 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 METAP2P50579 478 aaKnown RBP eCLIP23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 STAT2P52630 851 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 CCT2P78371 535 aaKnown RBP23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 STK3Q13188 491 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 ME3Q16798 604 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 FAM160B2Q86V87 743 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 KIFC2Q96AC6 838 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 PARK7Q99497 189 aaKnown RBP23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 R3HDMLQ9H3Y0 253 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 RNF186Q9NXI6 227 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 PRR12Q9ULL5 1215 aa23.32■■□□□ 1.32
SHKBP1-222ENST00000600320 ST18O60284 1047 aa23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 SNAP25P60880 206 aa23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 HERVK_113P62684 666 aa23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 IKQ13123 557 aaPredicted RBP23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 CRHR2Q13324 411 aa23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 SYDE2Q5VT97 1194 aa23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 CMTR1Q8N1G2 835 aaKnown RBP23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 CHURC1Q8WUH1 139 aa23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 NCOA5Q9HCD5 579 aaKnown RBP23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 LIMCH1Q9UPQ0 1083 aa23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 MYPNQ86TC9 1320 aa23.31■■□□□ 1.32
SHKBP1-222ENST00000600320 CA12O43570 354 aa23.3■■□□□ 1.32
SHKBP1-222ENST00000600320 CYTH3O43739 400 aa23.3■■□□□ 1.32
SHKBP1-222ENST00000600320 ALDH1A1P00352 501 aa23.3■■□□□ 1.32
SHKBP1-222ENST00000600320 KIF5BP33176 963 aa23.3■■□□□ 1.32
SHKBP1-222ENST00000600320 ADD1P35611 737 aaKnown RBP23.3■■□□□ 1.32
SHKBP1-222ENST00000600320 ST3GAL1Q11201 340 aa23.3■■□□□ 1.32
SHKBP1-222ENST00000600320 TMTC3Q6ZXV5 915 aa23.3■■□□□ 1.32
SHKBP1-222ENST00000600320 SRBD1Q8N5C6 995 aaKnown RBP23.3■■□□□ 1.32
SHKBP1-222ENST00000600320 ADAMTS5Q9UNA0 930 aa23.3■■□□□ 1.32
SHKBP1-222ENST00000600320 A0A0G2JMZ2 1700 aa23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 PFKFB2O60825 505 aa23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 SCRN1Q12765 414 aa23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 LBX2Q6XYB7 198 aa23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 NECAB1Q8N987 351 aa23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 PRPF38AQ8NAV1 312 aaKnown RBP23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 ZFYVE28Q9HCC9 887 aa23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 TXNRD2Q9NNW7 524 aa23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 RBM28Q9NW13 759 aaKnown RBP23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 HOXC10Q9NYD6 342 aa23.29■■□□□ 1.32
SHKBP1-222ENST00000600320 VWA5AO00534 786 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 TRPA1O75762 1119 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 CNMDO75829 334 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 TBC1D8O95759 1140 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 GNAQP50148 359 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 ADGRF4Q8IZF3 695 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 IL27Q8NEV9 243 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 REPS2Q8NFH8 660 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 SMCR8Q8TEV9 937 aaPredicted RBP23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 SLKQ9H2G2 1235 aaPredicted RBP23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 VAT1LQ9HCJ6 419 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 BTBD7Q9P203 1132 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 RBPJLQ9UBG7 517 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 CPA4Q9UI42 421 aa23.28■■□□□ 1.32
SHKBP1-222ENST00000600320 MAP2K1Q02750 393 aaPredicted RBP23.27■■□□□ 1.32
SHKBP1-222ENST00000600320 FUT2Q10981 343 aa23.27■■□□□ 1.32
SHKBP1-222ENST00000600320 RIOX1Q9H6W3 641 aa23.27■■□□□ 1.32
SHKBP1-222ENST00000600320 JMJD4Q9H9V9 463 aa23.27■■□□□ 1.32
SHKBP1-222ENST00000600320 WBP1LQ9NX94 342 aa23.27■■□□□ 1.32
SHKBP1-222ENST00000600320 TLR2O60603 784 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 DTNBO60941 627 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 NTRK3Q16288 839 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 CCDC82Q8N4S0 544 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 MTMR8Q96EF0 704 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 LZTS2Q9BRK4 669 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 PAGR1Q9BTK6 254 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 CFHR5Q9BXR6 569 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 RANBP17Q9H2T7 1088 aaKnown RBP23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 SLC38A10Q9HBR0 1119 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 CNTNAP5Q8WYK1 1306 aa23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 COL11A1P12107 1806 aaPredicted RBP23.26■■□□□ 1.31
SHKBP1-222ENST00000600320 DHX16O60231 1041 aaKnown RBP23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 BCRP11274 1271 aa23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 TAL1P17542 331 aaPredicted RBP23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 GCLCP48506 637 aaPredicted RBP23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 TMEM132BQ14DG7 1078 aa23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 PPP2R5BQ15173 497 aa23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 C17orf99Q6UX52 265 aa23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 ANKRD13CQ8N6S4 541 aa23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 PIBF1Q8WXW3 757 aa23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 GTF3C6Q969F1 213 aa23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 ZSCAN31Q96LW9 406 aaPredicted RBP23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 SPZ1Q9BXG8 430 aa23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 BAZ2BQ9UIF8 2168 aaKnown RBP23.25■■□□□ 1.31
SHKBP1-222ENST00000600320 CCDC196A0A1B0GTZ2 297 aa23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 PPFIA3O75145 1194 aa23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 SMARCA1P28370 1054 aa23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 MCM2P49736 904 aa23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 CDC37Q16543 378 aaPredicted RBP23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 Q3C1V9 767 aa23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 CCDC174Q6PII3 467 aa23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 GTF3C2Q8WUA4 911 aaPredicted RBP23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 TMX3Q96JJ7 454 aa23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 PIGSQ96S52 555 aa23.24■■□□□ 1.31
SHKBP1-222ENST00000600320 RAVER2Q9HCJ3 691 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms