RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.98■□□□□ 0.47
XRCC1-209ENST00000599693 TBX21Q9UL17 535 aa17.98■□□□□ 0.47
XRCC1-209ENST00000599693 FAM184BQ9ULE4 1060 aa17.98■□□□□ 0.47
XRCC1-209ENST00000599693 CHD9Q3L8U1 2897 aa17.97■□□□□ 0.47
XRCC1-209ENST00000599693 TIMP1P01033 207 aa17.97■□□□□ 0.47
XRCC1-209ENST00000599693 TJAP1Q5JTD0 557 aa17.97■□□□□ 0.47
XRCC1-209ENST00000599693 CCSAPQ6IQ19 270 aaPredicted RBP17.97■□□□□ 0.47
XRCC1-209ENST00000599693 PANK1Q8TE04 598 aa17.97■□□□□ 0.47
XRCC1-209ENST00000599693 TIFAQ96CG3 184 aa17.97■□□□□ 0.47
XRCC1-209ENST00000599693 SLF1Q9BQI6 1058 aa17.97■□□□□ 0.47
XRCC1-209ENST00000599693 ZNF576Q9H609 170 aa17.97■□□□□ 0.47
XRCC1-209ENST00000599693 MROH7Q68CQ1 1323 aa17.97■□□□□ 0.47
XRCC1-209ENST00000599693 DNAJC25-GNG10A0A024R161 153 aa17.96■□□□□ 0.47
XRCC1-209ENST00000599693 DUSP11O75319 330 aaKnown RBP17.96■□□□□ 0.47
XRCC1-209ENST00000599693 SNAI1O95863 264 aaPredicted RBP17.96■□□□□ 0.47
XRCC1-209ENST00000599693 UBE3CQ15386 1083 aa17.96■□□□□ 0.47
XRCC1-209ENST00000599693 KCNA10Q16322 511 aa17.96■□□□□ 0.47
XRCC1-209ENST00000599693 SNRNP48Q6IEG0 339 aaKnown RBP17.96■□□□□ 0.47
XRCC1-209ENST00000599693 MFSD5Q6N075 450 aa17.96■□□□□ 0.47
XRCC1-209ENST00000599693 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
XRCC1-209ENST00000599693 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.96■□□□□ 0.478e-7■■□□□ 13.2
XRCC1-209ENST00000599693 BOLA2Q9H3K6 86 aa17.96■□□□□ 0.47
XRCC1-209ENST00000599693 ZHX1Q9UKY1 873 aaPredicted RBP17.96■□□□□ 0.47
XRCC1-209ENST00000599693 ELP1O95163 1332 aa17.96■□□□□ 0.46
XRCC1-209ENST00000599693 MYADML2A6NDP7 307 aa17.95■□□□□ 0.46
XRCC1-209ENST00000599693 CHGBP05060 677 aa17.95■□□□□ 0.46
XRCC1-209ENST00000599693 ATP5JP18859 108 aa17.95■□□□□ 0.46
XRCC1-209ENST00000599693 CST5P28325 142 aaPredicted RBP17.95■□□□□ 0.46
XRCC1-209ENST00000599693 PPIGQ13427 754 aaKnown RBP eCLIP17.95■□□□□ 0.462e-6■■■□□ 15.7
XRCC1-209ENST00000599693 CTR9Q6PD62 1173 aa17.95■□□□□ 0.46
XRCC1-209ENST00000599693 CCDC174Q6PII3 467 aa17.95■□□□□ 0.46
XRCC1-209ENST00000599693 ZNF467Q7Z7K2 595 aaPredicted RBP17.95■□□□□ 0.46
XRCC1-209ENST00000599693 DDX11Q96FC9 970 aa17.95■□□□□ 0.46
XRCC1-209ENST00000599693 NUP88Q99567 741 aaPredicted RBP17.95■□□□□ 0.46
XRCC1-209ENST00000599693 HAUS7Q99871 368 aa17.95■□□□□ 0.46
XRCC1-209ENST00000599693 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.95■□□□□ 0.46
XRCC1-209ENST00000599693 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
XRCC1-209ENST00000599693 SLC4A4Q9Y6R1 1079 aa17.95■□□□□ 0.46
XRCC1-209ENST00000599693 MCM3APO60318 1980 aa17.94■□□□□ 0.46
XRCC1-209ENST00000599693 RAB11FIP3O75154 756 aa17.94■□□□□ 0.46
XRCC1-209ENST00000599693 HMMRO75330 724 aa17.94■□□□□ 0.46
XRCC1-209ENST00000599693 CDK7P50613 346 aa17.94■□□□□ 0.46
XRCC1-209ENST00000599693 RPAP2Q8IXW5 612 aaPredicted RBP17.94■□□□□ 0.46
XRCC1-209ENST00000599693 GLT1D1Q96MS3 346 aa17.94■□□□□ 0.46
XRCC1-209ENST00000599693 ARPP21Q9UBL0 812 aaPredicted RBP17.94■□□□□ 0.46
XRCC1-209ENST00000599693 RIPK3Q9Y572 518 aa17.94■□□□□ 0.46
XRCC1-209ENST00000599693 ATP2A1O14983 1001 aa17.93■□□□□ 0.46
XRCC1-209ENST00000599693 C6orf222P0C671 652 aaPredicted RBP17.93■□□□□ 0.46
XRCC1-209ENST00000599693 TMEM240Q5SV17 173 aa17.93■□□□□ 0.46
XRCC1-209ENST00000599693 RASIP1Q5U651 963 aa17.93■□□□□ 0.46
XRCC1-209ENST00000599693 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.93■□□□□ 0.46
XRCC1-209ENST00000599693 PCSK9Q8NBP7 692 aaKnown RBP17.93■□□□□ 0.46
XRCC1-209ENST00000599693 GAS2L1Q99501 681 aaPredicted RBP17.93■□□□□ 0.46
XRCC1-209ENST00000599693 PBX4Q9BYU1 374 aa17.93■□□□□ 0.46
XRCC1-209ENST00000599693 UPF3AQ9H1J1 476 aaKnown RBP17.93■□□□□ 0.46
XRCC1-209ENST00000599693 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.93■□□□□ 0.46
XRCC1-209ENST00000599693 NYAP2Q9P242 653 aa17.93■□□□□ 0.46
XRCC1-209ENST00000599693 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
XRCC1-209ENST00000599693 A0A0U1RQG5 324 aaPredicted RBP17.92■□□□□ 0.46
XRCC1-209ENST00000599693 TNFRSF10AO00220 468 aa17.92■□□□□ 0.46
XRCC1-209ENST00000599693 ADCY6O43306 1168 aa17.92■□□□□ 0.46
XRCC1-209ENST00000599693 NDUFB10O96000 172 aa17.92■□□□□ 0.46
XRCC1-209ENST00000599693 ASGR1P07306 291 aa17.92■□□□□ 0.46
XRCC1-209ENST00000599693 ACVR2BQ13705 512 aa17.92■□□□□ 0.46
XRCC1-209ENST00000599693 C16orf59Q7L2K0 433 aa17.92■□□□□ 0.46
XRCC1-209ENST00000599693 SIRT2Q8IXJ6 389 aa17.92■□□□□ 0.46
XRCC1-209ENST00000599693 PRPF38AQ8NAV1 312 aaKnown RBP17.92■□□□□ 0.46
XRCC1-209ENST00000599693 PUS7LQ9H0K6 701 aaKnown RBP17.92■□□□□ 0.46
XRCC1-209ENST00000599693 SPC25Q9HBM1 224 aa17.92■□□□□ 0.46
XRCC1-209ENST00000599693 CHD7Q9P2D1 2997 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 F5H6K3 240 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 ARVCFO00192 962 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 RASA1P20936 1047 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 PBX2P40425 430 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 GJA9P57773 515 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 IRX5P78411 483 aaPredicted RBP17.91■□□□□ 0.46
XRCC1-209ENST00000599693 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.46
XRCC1-209ENST00000599693 KLRC3Q07444 240 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 CCDC144BQ3MJ40 725 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 PSRC1Q6PGN9 363 aaPredicted RBP17.91■□□□□ 0.46
XRCC1-209ENST00000599693 CCDC129Q6ZRS4 1044 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 CPXCR1Q8N123 301 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 TMEM199Q8N511 208 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 VTI1AQ96AJ9 217 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 FGD4Q96M96 766 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 ABHD16BQ9H3Z7 469 aa17.91■□□□□ 0.46
XRCC1-209ENST00000599693 GRXCR1A8MXD5 290 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 ZBED4O75132 1171 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 CSF2RAP15509 400 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 SLC4A3P48751 1232 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 SBK1Q52WX2 424 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 AKNAD1Q5T1N1 836 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 FAM126BQ8IXS8 530 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 PPP1R12CQ9BZL4 782 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 PRDM12Q9H4Q4 367 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 MKNK2Q9HBH9 465 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 FBXO40Q9UH90 709 aa17.9■□□□□ 0.46
XRCC1-209ENST00000599693 CTDP1Q9Y5B0 961 aaPredicted RBP17.9■□□□□ 0.46
XRCC1-209ENST00000599693 TLR3O15455 904 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms