RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 STARD7Q9NQZ5 370 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 RYDENQ9NUL5 291 aaKnown RBP10.55□□□□□ -0.72
SMAD4-215ENST00000592911 NOP58Q9Y2X3 529 aaKnown RBP10.55□□□□□ -0.72
SMAD4-215ENST00000592911 TMX2Q9Y320 296 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 NDUFB9Q9Y6M9 179 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-215ENST00000592911 PQBP1O60828 265 aaKnown RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 DUSP11O75319 330 aaKnown RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 FLOT1O75955 427 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 POLR3DP05423 398 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 ZNF865P0CJ78 1059 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 ZAP70P43403 619 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 ACLYP53396 1101 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 RARSP54136 660 aaKnown RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 EPHB4P54760 987 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 SEPT2Q15019 361 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 ZNF792Q3KQV3 632 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 CCSAPQ6IQ19 270 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 NCAPG2Q86XI2 1143 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 ADAMTS19Q8TE59 1207 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 GBF1Q92538 1859 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 GLT1D1Q96MS3 346 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 UHRF1Q96T88 793 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 MMP19Q99542 508 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 DBNDD2Q9BQY9 259 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 RIOK1Q9BRS2 568 aaKnown RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 CRNKL1Q9BZJ0 848 aaKnown RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 SPC25Q9HBM1 224 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 CXXC1Q9P0U4 656 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-215ENST00000592911 MSRAQ9UJ68 235 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 FAM184BQ9ULE4 1060 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 MCM3APO60318 1980 aa10.54□□□□□ -0.72
SMAD4-215ENST00000592911 PNMA6EA0A0J9YXQ4 647 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 A0A1W2PRG0 241 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 TLR3O15455 904 aaKnown RBP10.53□□□□□ -0.72
SMAD4-215ENST00000592911 IDH1O75874 414 aaKnown RBP10.53□□□□□ -0.72
SMAD4-215ENST00000592911 POU3F3P20264 500 aaPredicted RBP10.53□□□□□ -0.72
SMAD4-215ENST00000592911 CDK7P50613 346 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 DYNLL1P63167 89 aaKnown RBP10.53□□□□□ -0.72
SMAD4-215ENST00000592911 TMEM240Q5SV17 173 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 CCDC129Q6ZRS4 1044 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 ERC1Q8IUD2 1116 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 HERVK_113Q902F9 699 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 FERMT2Q96AC1 680 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.53□□□□□ -0.721e-10■□□□□ 10.9
SMAD4-215ENST00000592911 PBX4Q9BYU1 374 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 PIH1D3Q9NQM4 214 aaKnown RBP10.53□□□□□ -0.72
SMAD4-215ENST00000592911 SNRKQ9NRH2 765 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 BRWD1Q9NSI6 2320 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 PRRC2BQ5JSZ5 2229 aaKnown RBP10.53□□□□□ -0.72
SMAD4-215ENST00000592911 MUC6Q6W4X9 2439 aa10.53□□□□□ -0.72
SMAD4-215ENST00000592911 A0A0U1RQG5 324 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-215ENST00000592911 ATP2A1O14983 1001 aa10.52□□□□□ -0.73
SMAD4-215ENST00000592911 CABYRO75952 493 aa10.52□□□□□ -0.73
SMAD4-215ENST00000592911 PLCD1P51178 756 aa10.52□□□□□ -0.73
SMAD4-215ENST00000592911 ATP8B2P98198 1209 aa10.52□□□□□ -0.73
SMAD4-215ENST00000592911 OS9Q13438 667 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-215ENST00000592911 PLS1Q14651 629 aa10.52□□□□□ -0.73
SMAD4-215ENST00000592911 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMAD4-215ENST00000592911 UPF3AQ9H1J1 476 aaKnown RBP10.52□□□□□ -0.73
SMAD4-215ENST00000592911 DBNLQ9UJU6 430 aaKnown RBP10.52□□□□□ -0.73
SMAD4-215ENST00000592911 CHD9Q3L8U1 2897 aa10.52□□□□□ -0.73
SMAD4-215ENST00000592911 MYH7P12883 1935 aa10.52□□□□□ -0.73
SMAD4-215ENST00000592911 GREB1LQ9C091 1923 aaPredicted RBP10.52□□□□□ -0.73
SMAD4-215ENST00000592911 SYNRGQ9UMZ2 1314 aa10.52□□□□□ -0.73
SMAD4-215ENST00000592911 CHD7Q9P2D1 2997 aa10.52□□□□□ -0.73
SMAD4-215ENST00000592911 BAZ2AQ9UIF9 1905 aaKnown RBP10.51□□□□□ -0.73
SMAD4-215ENST00000592911 MAGEB6P1A0A0J9YX57 407 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 ARVCFO00192 962 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 PGK1P00558 417 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 PFKMP08237 780 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 STAT3P40763 770 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 ICA1Q05084 483 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 TMEM132BQ14DG7 1078 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 PRAMEF19Q5SWL8 479 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 ANO1Q5XXA6 986 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 AMOTL1Q8IY63 956 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 MIGA1Q8NAN2 632 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 ATG4CQ96DT6 458 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 TEX13BQ9BXU2 312 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 ABHD16BQ9H3Z7 469 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 KANSL2Q9H9L4 492 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 GOPCQ9HD26 462 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 ATP8A2Q9NTI2 1148 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 MCM9Q9NXL9 1143 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 ZNF214Q9UL59 606 aaPredicted RBP10.51□□□□□ -0.73
SMAD4-215ENST00000592911 PPP1R9AQ9ULJ8 1098 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 SYNPO2Q9UMS6 1093 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 HCN4Q9Y3Q4 1203 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 TCF20Q9UGU0 1960 aaKnown RBP10.51□□□□□ -0.73
SMAD4-215ENST00000592911 TRANK1O15050 2925 aa10.51□□□□□ -0.73
SMAD4-215ENST00000592911 DNAJC25-GNG10A0A024R161 153 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 VWA5AO00534 786 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 MPHOSPH10O00566 681 aaKnown RBP10.5□□□□□ -0.73
SMAD4-215ENST00000592911 SURF6O75683 361 aaKnown RBP10.5□□□□□ -0.73
SMAD4-215ENST00000592911 FDX1P10109 184 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 TRIM27P14373 513 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 GJA9P57773 515 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 KCNA10Q16322 511 aa10.5□□□□□ -0.73
SMAD4-215ENST00000592911 HSP90AB4PQ58FF6 505 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms