RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 TMTC3Q6ZXV5 915 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 KCTD1Q719H9 257 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
SMAD4-214ENST00000592186 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 GTF3C2Q8WUA4 911 aaPredicted RBP12.39□□□□□ -0.43
SMAD4-214ENST00000592186 BRI3BPQ8WY22 251 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 GTF3C6Q969F1 213 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 NUP88Q99567 741 aaPredicted RBP12.39□□□□□ -0.43
SMAD4-214ENST00000592186 SLF1Q9BQI6 1058 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 SPZ1Q9BXG8 430 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 GPCPD1Q9NPB8 672 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 WDR33Q9C0J8 1336 aaKnown RBP12.39□□□□□ -0.43
SMAD4-214ENST00000592186 OTOFQ9HC10 1997 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 PDHXO00330 501 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 FLOT1O75955 427 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 CD2BP2O95400 341 aaKnown RBP12.38□□□□□ -0.43
SMAD4-214ENST00000592186 GOLGA8HP0CJ92 632 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 IFNAR1P17181 557 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 RXRAP19793 462 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
SMAD4-214ENST00000592186 CCT2P78371 535 aaKnown RBP12.38□□□□□ -0.43
SMAD4-214ENST00000592186 IRX3P78415 501 aaPredicted RBP12.38□□□□□ -0.43
SMAD4-214ENST00000592186 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
SMAD4-214ENST00000592186 SCRN1Q12765 414 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 SYDE2Q5VT97 1194 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 TRIM22Q8IYM9 498 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 RIOX1Q9H6W3 641 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
SMAD4-214ENST00000592186 ADAMTS5Q9UNA0 930 aa12.38□□□□□ -0.43
SMAD4-214ENST00000592186 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.38□□□□□ -0.43
SMAD4-214ENST00000592186 FRMPD2Q68DX3 1309 aaPredicted RBP12.38□□□□□ -0.43
SMAD4-214ENST00000592186 BTBD19C9JJ37 291 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 ZBED4O75132 1171 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 CDC27P30260 824 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 GRM1Q13255 1194 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 CUL4AQ13619 759 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 TREML2Q5T2D2 321 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 RAB11FIP4Q86YS3 637 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 IFNL1Q8IU54 200 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 SRBD1Q8N5C6 995 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 MB21D1Q8N884 522 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 NECAB1Q8N987 351 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 RRP36Q96EU6 259 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 INTS4Q96HW7 963 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 PTPN18Q99952 460 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 UBA5Q9GZZ9 404 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 ASCC2Q9H1I8 757 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 NCOA5Q9HCD5 579 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 DAXXQ9UER7 740 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 PPP1R9AQ9ULJ8 1098 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 PRR12Q9ULL5 1215 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 CTDP1Q9Y5B0 961 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 PRPF3O43395 683 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 HSP90AA1P07900 732 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 SLC16A2P36021 539 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 GCLCP48506 637 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 VEGFBP49765 207 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 OAZ1P54368 228 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 HMGN5P82970 282 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 SSRP1Q08945 709 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 DGKZQ13574 1117 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 NTRK3Q16288 839 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 TTBK2Q6IQ55 1244 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 LBX2Q6XYB7 198 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 ADGRF4Q8IZF3 695 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 WASF1Q92558 559 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 KIFC2Q96AC6 838 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 PARK7Q99497 189 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 RNF26Q9BY78 433 aaPredicted RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 VAT1LQ9HCJ6 419 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 SEC63Q9UGP8 760 aaKnown RBP12.37□□□□□ -0.43
SMAD4-214ENST00000592186 KIF3AQ9Y496 699 aa12.37□□□□□ -0.43
SMAD4-214ENST00000592186 PHIPQ8WWQ0 1821 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 PNMA6FA0A0J9YX94 578 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 VWA5AO00534 786 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 PLEKHA8P1O95397 391 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 LARGE1O95461 756 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 FMNL1O95466 1100 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-214ENST00000592186 HERVK_113P62684 666 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 FUT2Q10981 343 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 CCDC83Q8IWF9 413 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 FAM177A1Q8N128 213 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-214ENST00000592186 FAM43AQ8N2R8 423 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 CCDC82Q8N4S0 544 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 SMCR8Q8TEV9 937 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-214ENST00000592186 MTMR8Q96EF0 704 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 P2RX7Q99572 595 aaKnown RBP12.36□□□□□ -0.43
SMAD4-214ENST00000592186 JMJD4Q9H9V9 463 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 SLC38A10Q9HBR0 1119 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 FBXO28Q9NVF7 368 aa12.36□□□□□ -0.43
SMAD4-214ENST00000592186 V9GY48 417 aaPredicted RBP12.36□□□□□ -0.43
SMAD4-214ENST00000592186 ATP2A1O14983 1001 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 ZBTB5O15062 677 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 CYTH3O43739 400 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 AOC2O75106 756 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 DEXIO95424 95 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 RASGRP2Q7LDG7 609 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 NBPF11Q86T75 865 aa12.35□□□□□ -0.43
SMAD4-214ENST00000592186 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms