RNA–Protein interactions for RNA: ENST00000591991.1

SAFB-210, Transcript of scaffold attachment factor B, human

TSL 2

Gene SAFB, Length 3,471 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAFB-210	ENST00000591991	TRAPPC3L	Q5T215	181 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	FCHSD1	Q86WN1	690 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	TEX11	Q8IYF3	940 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	WDR66	Q8TBY9	1149 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	PCMTD1	Q96MG8	357 aa	Predicted RBP	13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	CTAGE1	Q96RT6	745 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	TMEM47	Q9BQJ4	181 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	CNTNAP4	Q9C0A0	1308 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	KLRF2	D3W0D1	207 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	TFRC	P02786	760 aa	Known RBP	13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	E2F4	Q16254	413 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	KIF4B	Q2VIQ3	1234 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	CCDC178	Q5BJE1	867 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	PDXDC2P	Q6P474	469 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	TRIM47	Q96LD4	638 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	BCOR	Q6W2J9	1755 aa		13.42	□□□□□ -0.26
SAFB-210	ENST00000591991	POLR3G	O15318	223 aa	Predicted RBP	13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	CYTH3	O43739	400 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	CCNT1	O60563	726 aa	Known RBP	13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	MFAP3L	O75121	409 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	GYPC	P04921	128 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	ERCC3	P19447	782 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	TM4SF1	P30408	202 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	COPB1	P53618	953 aa	Known RBP	13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	SBK1	Q52WX2	424 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	JAKMIP3	Q5VZ66	844 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	APTX	Q7Z2E3	356 aa	Known RBP	13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	ZNF804A	Q7Z570	1209 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	SLF1	Q9BQI6	1058 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	MAD2L2	Q9UI95	211 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	GOLGA6L9	A6NEM1	432 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	C6orf229	H3BNL8	230 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	ZBTB22	O15209	634 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	KIF5C	O60282	957 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	TADA3	O75528	432 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	ATP2B2	Q01814	1243 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	EYA3	Q99504	573 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	TUBB4A	P04350	444 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	KRT9	P35527	623 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	SLC35G1	Q2M3R5	365 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	CDKAL1	Q5VV42	579 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	PCDHA6	Q9UN73	950 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	PCDHA8	Q9Y5H6	950 aa		13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.41	□□□□□ -0.26
SAFB-210	ENST00000591991	ERICH4	A6NGS2	130 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	RNF225	M0QZC1	329 aa	Predicted RBP	13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	RIMBP2	O15034	1052 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	ABL1	P00519	1130 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	TRAPPC10	P48553	1259 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	CLEC10A	Q8IUN9	316 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	DISC1	Q9NRI5	854 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	ADGRG1	Q9Y653	693 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	PLCH1	Q4KWH8	1693 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	GPSM2	P81274	684 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	GRAP	Q13588	217 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	DGKH	Q86XP1	1220 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	GRAPL	Q8TC17	118 aa	Predicted RBP	13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	BIN2	Q9UBW5	565 aa	Predicted RBP	13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	LONP1	P36776	959 aa	Known RBP	13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	PMS1	P54277	932 aa	Known RBP	13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	BMS1	Q14692	1282 aa	Known RBP	13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	GRM4	Q14833	912 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	SOGA3	Q5TF21	947 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	CNGA4	Q8IV77	575 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	CCDC148	Q8NFR7	591 aa		13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	SRRT	Q9BXP5	876 aa	Known RBP	13.4	□□□□□ -0.26
SAFB-210	ENST00000591991	GNAQ	P50148	359 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	GSTO1	P78417	241 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	TCP11X2	Q5H9J9	407 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	HPS3	Q969F9	1004 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	PANX2	Q96RD6	677 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	RNF216	Q9NWF9	866 aa	Predicted RBP	13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	RMND1	Q9NWS8	449 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	SMCO2	A6NFE2	343 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	LDHC	P07864	332 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	H2AFX	P16104	143 aa	Predicted RBP	13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	RASA1	P20936	1047 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	TEC	P42680	631 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	CDK8	P49336	464 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	MFSD14B	Q5SR56	506 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	SEC63	Q9UGP8	760 aa	Known RBP	13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	RWDD2A	Q9UIY3	292 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	TFR2	Q9UP52	801 aa		13.39	□□□□□ -0.27
SAFB-210	ENST00000591991	EFCAB8	A8MWE9	144 aa		13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	PARP1	P09874	1014 aa	Known RBP	13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	ASIC1	P78348	528 aa		13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	LRRC47	Q8N1G4	583 aa	Known RBP	13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	SLC35F6	Q8N357	371 aa		13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	USP21	Q9UK80	565 aa		13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	PIGS	Q96S52	555 aa		13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	CHP1	Q99653	195 aa		13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	GTPBP4	Q9BZE4	634 aa	Known RBP	13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	TCP11L1	Q9NUJ3	509 aa		13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	TMEM260	Q9NX78	707 aa		13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	GUCA1B	Q9UMX6	200 aa		13.38	□□□□□ -0.27
SAFB-210	ENST00000591991	MRFAP1	Q9Y605	127 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms