RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 MORF4L1Q9UBU8 362 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 BRPF3Q9ULD4 1205 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 ADAMTS5Q9UNA0 930 aa22.34■■□□□ 1.17
DDX39A-214ENST00000590556 KLF18A0A0U1RQI7 1052 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 VWA5AO00534 786 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 FKTNO75072 461 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 SP3Q02447 781 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 APOBRQ0VD83 1088 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 FAM110CQ1W6H9 321 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 SYDE2Q5VT97 1194 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 APOA5Q6Q788 366 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 GPRC5AQ8NFJ5 357 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 CTCFLQ8NI51 663 aaPredicted RBP22.33■■□□□ 1.17
DDX39A-214ENST00000590556 TBC1D32Q96NH3 1257 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 MAP3K14Q99558 947 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 TXNRD2Q9NNW7 524 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 MAD2L2Q9UI95 211 aa22.33■■□□□ 1.17
DDX39A-214ENST00000590556 NAP1L2Q9ULW6 460 aaPredicted RBP22.33■■□□□ 1.17
DDX39A-214ENST00000590556 CTDP1Q9Y5B0 961 aaPredicted RBP22.33■■□□□ 1.17
DDX39A-214ENST00000590556 PALM3A6NDB9 673 aaPredicted RBP22.32■■□□□ 1.16
DDX39A-214ENST00000590556 KLRF2D3W0D1 207 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 PEX10O60683 326 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 ZBED4O75132 1171 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 CNMDO75829 334 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 KIF5BP33176 963 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 NEK4P51957 841 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 LBX1P52954 281 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 TOB2Q14106 344 aaPredicted RBP22.32■■□□□ 1.16
DDX39A-214ENST00000590556 RAB11FIP4Q86YS3 637 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 STAG2Q8N3U4 1231 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 ZNF296Q8WUU4 475 aaPredicted RBP22.32■■□□□ 1.16
DDX39A-214ENST00000590556 KIF2CQ99661 725 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 UBA5Q9GZZ9 404 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 BTBD7Q9P203 1132 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 PRR12Q9ULL5 1215 aa22.32■■□□□ 1.16
DDX39A-214ENST00000590556 ZBTB43O43298 467 aa22.31■■□□□ 1.16
DDX39A-214ENST00000590556 FDX1P10109 184 aa22.31■■□□□ 1.16
DDX39A-214ENST00000590556 RXRAP19793 462 aa22.31■■□□□ 1.16
DDX39A-214ENST00000590556 ERVK-9P63128 1117 aa22.31■■□□□ 1.16
DDX39A-214ENST00000590556 ERVK-24P63145 666 aa22.31■■□□□ 1.16
DDX39A-214ENST00000590556 MICU3Q86XE3 530 aa22.31■■□□□ 1.16
DDX39A-214ENST00000590556 CCDC144CPQ8IYA2 1237 aa22.31■■□□□ 1.16
DDX39A-214ENST00000590556 ALDH8A1Q9H2A2 487 aaPredicted RBP22.31■■□□□ 1.16
DDX39A-214ENST00000590556 PLS1Q14651 629 aa22.3■■□□□ 1.16
DDX39A-214ENST00000590556 Q3C1V9 767 aa22.3■■□□□ 1.16
DDX39A-214ENST00000590556 FANCBQ8NB91 859 aa22.3■■□□□ 1.16
DDX39A-214ENST00000590556 CPVLQ9H3G5 476 aa22.3■■□□□ 1.16
DDX39A-214ENST00000590556 SLC38A10Q9HBR0 1119 aa22.3■■□□□ 1.16
DDX39A-214ENST00000590556 A0A0G2JMZ2 1700 aa22.3■■□□□ 1.16
DDX39A-214ENST00000590556 COL11A1P12107 1806 aaPredicted RBP22.29■■□□□ 1.16
DDX39A-214ENST00000590556 GOLGA8BA8MQT2 603 aa22.29■■□□□ 1.16
DDX39A-214ENST00000590556 CCNA1P78396 465 aa22.29■■□□□ 1.16
DDX39A-214ENST00000590556 KIF22Q14807 665 aa22.29■■□□□ 1.16
DDX39A-214ENST00000590556 TMEM132BQ14DG7 1078 aa22.29■■□□□ 1.16
DDX39A-214ENST00000590556 ANKRD1Q15327 319 aa22.29■■□□□ 1.16
DDX39A-214ENST00000590556 REPS2Q8NFH8 660 aa22.29■■□□□ 1.16
DDX39A-214ENST00000590556 ERO1AQ96HE7 468 aa22.29■■□□□ 1.16
DDX39A-214ENST00000590556 SPATC1LQ9H0A9 340 aa22.29■■□□□ 1.16
DDX39A-214ENST00000590556 GOLGA8AA7E2F4 631 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 DHX16O60231 1041 aaKnown RBP22.28■■□□□ 1.16
DDX39A-214ENST00000590556 GNAQP50148 359 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 RCAN1P53805 252 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 EVCP57679 992 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 SNAP25P60880 206 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 LACTBP83111 547 aaPredicted RBP22.28■■□□□ 1.16
DDX39A-214ENST00000590556 RABEP1Q15276 862 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 ADGRF4Q8IZF3 695 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 CD99L2Q8TCZ2 262 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 LZTS2Q9BRK4 669 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 LARP6Q9BRS8 491 aaKnown RBP22.28■■□□□ 1.16
DDX39A-214ENST00000590556 VAT1LQ9HCJ6 419 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 CASP8AP2Q9UKL3 1982 aa22.28■■□□□ 1.16
DDX39A-214ENST00000590556 ECM2O94769 699 aaPredicted RBP22.27■■□□□ 1.16
DDX39A-214ENST00000590556 STAT3P40763 770 aa22.27■■□□□ 1.16
DDX39A-214ENST00000590556 AK2P54819 239 aa22.27■■□□□ 1.16
DDX39A-214ENST00000590556 RTN1Q16799 776 aa22.27■■□□□ 1.16
DDX39A-214ENST00000590556 CCAR1Q8IX12 1150 aaKnown RBP22.27■■□□□ 1.16
DDX39A-214ENST00000590556 CPXCR1Q8N123 301 aa22.27■■□□□ 1.16
DDX39A-214ENST00000590556 MOV10L1Q9BXT6 1211 aaKnown RBP22.27■■□□□ 1.16
DDX39A-214ENST00000590556 RANBP17Q9H2T7 1088 aaKnown RBP22.27■■□□□ 1.16
DDX39A-214ENST00000590556 RAVER2Q9HCJ3 691 aaKnown RBP22.27■■□□□ 1.16
DDX39A-214ENST00000590556 RBM28Q9NW13 759 aaKnown RBP22.27■■□□□ 1.16
DDX39A-214ENST00000590556 ZNF214Q9UL59 606 aaPredicted RBP22.27■■□□□ 1.16
DDX39A-214ENST00000590556 ATP2A1O14983 1001 aa22.26■■□□□ 1.15
DDX39A-214ENST00000590556 PDIA3P30101 505 aaKnown RBP22.26■■□□□ 1.15
DDX39A-214ENST00000590556 METAP2P50579 478 aaKnown RBP eCLIP22.26■■□□□ 1.15
DDX39A-214ENST00000590556 OAZ1P54368 228 aa22.26■■□□□ 1.15
DDX39A-214ENST00000590556 CCDC174Q6PII3 467 aa22.26■■□□□ 1.15
DDX39A-214ENST00000590556 ZNF274Q96GC6 653 aaPredicted RBP22.26■■□□□ 1.15
DDX39A-214ENST00000590556 TEX13BQ9BXU2 312 aa22.26■■□□□ 1.15
DDX39A-214ENST00000590556 PLEKHA8P1O95397 391 aa22.25■■□□□ 1.15
DDX39A-214ENST00000590556 FMNL1O95466 1100 aaPredicted RBP22.25■■□□□ 1.15
DDX39A-214ENST00000590556 PSMC4P43686 418 aa22.25■■□□□ 1.15
DDX39A-214ENST00000590556 SLC4A3P48751 1232 aa22.25■■□□□ 1.15
DDX39A-214ENST00000590556 ARHGEF6Q15052 776 aa22.25■■□□□ 1.15
DDX39A-214ENST00000590556 PPP2R5BQ15173 497 aa22.25■■□□□ 1.15
DDX39A-214ENST00000590556 SNRNP48Q6IEG0 339 aaKnown RBP22.25■■□□□ 1.15
DDX39A-214ENST00000590556 NBPF11Q86T75 865 aa22.25■■□□□ 1.15
DDX39A-214ENST00000590556 PORCNQ9H237 461 aa22.25■■□□□ 1.15
DDX39A-214ENST00000590556 JMJD4Q9H9V9 463 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms