RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 ATP2A1O14983 1001 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 INHAP05111 366 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 ELNP15502 786 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 CYP2B6P20813 491 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 OAZ1P54368 228 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 GRB14Q14449 540 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 NCAPG2Q86XI2 1143 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 REPS2Q8NFH8 660 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 ANKS1AQ92625 1134 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 ZSCAN10Q96SZ4 725 aaPredicted RBP19.3■□□□□ 0.68
DNMT1-221ENST00000589538 TEX13BQ9BXU2 312 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 SLC38A10Q9HBR0 1119 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 ANO2Q9NQ90 1003 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 SLC5A4Q9NY91 659 aa19.3■□□□□ 0.68
DNMT1-221ENST00000589538 ZNF214Q9UL59 606 aaPredicted RBP19.3■□□□□ 0.68
DNMT1-221ENST00000589538 ZKSCAN1P17029 563 aaPredicted RBP19.29■□□□□ 0.68
DNMT1-221ENST00000589538 CAPN2P17655 700 aa19.29■□□□□ 0.68
DNMT1-221ENST00000589538 CCDC96Q2M329 555 aa19.29■□□□□ 0.68
DNMT1-221ENST00000589538 RALYLQ86SE5 291 aaKnown RBP19.29■□□□□ 0.68
DNMT1-221ENST00000589538 LSG1Q9H089 658 aaKnown RBP19.29■□□□□ 0.68
DNMT1-221ENST00000589538 KAT14Q9H8E8 782 aa19.29■□□□□ 0.68
DNMT1-221ENST00000589538 HOXC6P09630 235 aa19.28■□□□□ 0.68
DNMT1-221ENST00000589538 FCER1AP12319 257 aa19.28■□□□□ 0.68
DNMT1-221ENST00000589538 NCOA7Q8NI08 942 aa19.28■□□□□ 0.68
DNMT1-221ENST00000589538 NKX2-3Q8TAU0 364 aa19.28■□□□□ 0.68
DNMT1-221ENST00000589538 ZKSCAN3Q9BRR0 538 aa19.28■□□□□ 0.68
DNMT1-221ENST00000589538 TNKSO95271 1327 aa19.27■□□□□ 0.68
DNMT1-221ENST00000589538 E7EWF7 191 aa19.27■□□□□ 0.68
DNMT1-221ENST00000589538 CCL5P13501 91 aa19.27■□□□□ 0.68
DNMT1-221ENST00000589538 SART3Q15020 963 aaKnown RBP19.27■□□□□ 0.68
DNMT1-221ENST00000589538 GPATCH4Q5T3I0 446 aaKnown RBP19.27■□□□□ 0.68
DNMT1-221ENST00000589538 RNF20Q5VTR2 975 aa19.27■□□□□ 0.68
DNMT1-221ENST00000589538 SNRNP48Q6IEG0 339 aaKnown RBP19.27■□□□□ 0.68
DNMT1-221ENST00000589538 KCTD1Q719H9 257 aa19.27■□□□□ 0.68
DNMT1-221ENST00000589538 DPP9Q86TI2 863 aa19.27■□□□□ 0.68
DNMT1-221ENST00000589538 PNMA1Q8ND90 353 aa19.27■□□□□ 0.68
DNMT1-221ENST00000589538 RNF208Q9H0X6 261 aa19.27■□□□□ 0.68
DNMT1-221ENST00000589538 MTMR7Q9Y216 660 aa19.27■□□□□ 0.68
DNMT1-221ENST00000589538 ERICH2A1L162 156 aa19.26■□□□□ 0.67
DNMT1-221ENST00000589538 PDHBP11177 359 aa19.26■□□□□ 0.67
DNMT1-221ENST00000589538 ADORA2AP29274 412 aa19.26■□□□□ 0.67
DNMT1-221ENST00000589538 MTFR1Q15390 333 aa19.26■□□□□ 0.67
DNMT1-221ENST00000589538 BTNL9Q6UXG8 535 aa19.26■□□□□ 0.67
DNMT1-221ENST00000589538 ENAHQ8N8S7 591 aaPredicted RBP19.26■□□□□ 0.67
DNMT1-221ENST00000589538 TRIB2Q92519 343 aa19.26■□□□□ 0.67
DNMT1-221ENST00000589538 FBXO40Q9UH90 709 aa19.26■□□□□ 0.67
DNMT1-221ENST00000589538 POTEFA5A3E0 1075 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 MYCP01106 439 aaPredicted RBP19.25■□□□□ 0.67
DNMT1-221ENST00000589538 GJB1P08034 283 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 SNHG28P0DPA3 235 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 MLLT1Q03111 559 aaPredicted RBP19.25■□□□□ 0.67
DNMT1-221ENST00000589538 ZNF543Q08ER8 600 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 IFIT1BQ5T764 474 aaKnown RBP19.25■□□□□ 0.67
DNMT1-221ENST00000589538 CPXCR1Q8N123 301 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 CHST13Q8NET6 341 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 MMP19Q99542 508 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 PNMA2Q9UL42 364 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 PRR12Q9ULL5 1215 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 CENPFP49454 3210 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 RPTORQ8N122 1335 aa19.25■□□□□ 0.67
DNMT1-221ENST00000589538 KIAA0100Q14667 2235 aaKnown RBP19.24■□□□□ 0.67
DNMT1-221ENST00000589538 KCTD2Q14681 263 aa19.24■□□□□ 0.67
DNMT1-221ENST00000589538 NECTIN1Q15223 517 aa19.24■□□□□ 0.67
DNMT1-221ENST00000589538 TKFCQ3LXA3 575 aa19.24■□□□□ 0.67
DNMT1-221ENST00000589538 SYDE2Q5VT97 1194 aa19.24■□□□□ 0.67
DNMT1-221ENST00000589538 MFSD14CQ5VZR4 134 aa19.24■□□□□ 0.67
DNMT1-221ENST00000589538 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.24■□□□□ 0.67
DNMT1-221ENST00000589538 CHMP4CQ96CF2 233 aa19.24■□□□□ 0.67
DNMT1-221ENST00000589538 MTA3Q9BTC8 594 aa19.24■□□□□ 0.67
DNMT1-221ENST00000589538 UNC93B1Q9H1C4 597 aa19.24■□□□□ 0.67
DNMT1-221ENST00000589538 RAVER2Q9HCJ3 691 aaKnown RBP19.24■□□□□ 0.67
DNMT1-221ENST00000589538 HMX1Q9NP08 348 aaPredicted RBP19.24■□□□□ 0.67
DNMT1-221ENST00000589538 ZNFX1Q9P2E3 1918 aaKnown RBP19.23■□□□□ 0.67
DNMT1-221ENST00000589538 SLC27A2O14975 620 aa19.23■□□□□ 0.67
DNMT1-221ENST00000589538 GJA8P48165 433 aa19.23■□□□□ 0.67
DNMT1-221ENST00000589538 SEC23AQ15436 765 aa19.23■□□□□ 0.67
DNMT1-221ENST00000589538 ASPRV1Q53RT3 343 aa19.23■□□□□ 0.67
DNMT1-221ENST00000589538 MAP3K21Q5TCX8 1036 aa19.23■□□□□ 0.67
DNMT1-221ENST00000589538 OLFML2BQ68BL8 750 aa19.23■□□□□ 0.67
DNMT1-221ENST00000589538 CREB3L3Q68CJ9 461 aa19.23■□□□□ 0.67
DNMT1-221ENST00000589538 CYB5R4Q7L1T6 521 aa19.23■□□□□ 0.67
DNMT1-221ENST00000589538 DIS3Q9Y2L1 958 aaKnown RBP19.23■□□□□ 0.67
DNMT1-221ENST00000589538 FRMPD2Q68DX3 1309 aaPredicted RBP19.23■□□□□ 0.67
DNMT1-221ENST00000589538 IFIT3O14879 490 aaKnown RBP19.22■□□□□ 0.67
DNMT1-221ENST00000589538 PRKAR2AP13861 404 aaKnown RBP19.22■□□□□ 0.67
DNMT1-221ENST00000589538 RASGRP2Q7LDG7 609 aa19.22■□□□□ 0.67
DNMT1-221ENST00000589538 NPLOC4Q8TAT6 608 aa19.22■□□□□ 0.67
DNMT1-221ENST00000589538 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.22■□□□□ 0.67
DNMT1-221ENST00000589538 RANBP17Q9H2T7 1088 aaKnown RBP19.22■□□□□ 0.67
DNMT1-221ENST00000589538 GPCPD1Q9NPB8 672 aa19.22■□□□□ 0.67
DNMT1-221ENST00000589538 PAK6Q9NQU5 681 aaPredicted RBP19.22■□□□□ 0.67
DNMT1-221ENST00000589538 EN2P19622 333 aaPredicted RBP19.21■□□□□ 0.67
DNMT1-221ENST00000589538 SLC4A3P48751 1232 aa19.21■□□□□ 0.67
DNMT1-221ENST00000589538 WTAPQ15007 396 aa19.21■□□□□ 0.67
DNMT1-221ENST00000589538 CCL14Q16627 93 aa19.21■□□□□ 0.67
DNMT1-221ENST00000589538 TTBK2Q6IQ55 1244 aa19.21■□□□□ 0.67
DNMT1-221ENST00000589538 STOX1Q6ZVD7 989 aa19.21■□□□□ 0.67
DNMT1-221ENST00000589538 MB21D2Q8IYB1 491 aaPredicted RBP19.21■□□□□ 0.67
DNMT1-221ENST00000589538 DDX11Q96FC9 970 aa19.21■□□□□ 0.67
DNMT1-221ENST00000589538 RIPK3Q9Y572 518 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms