RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 CDK7P50613 346 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 CCSAPQ6IQ19 270 aaPredicted RBP12.34□□□□□ -0.43
GGA3-219ENST00000584550 PSRC1Q6PGN9 363 aaPredicted RBP12.34□□□□□ -0.43
GGA3-219ENST00000584550 SIAH1Q8IUQ4 282 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 MCM9Q9NXL9 1143 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 DBNLQ9UJU6 430 aaKnown RBP12.34□□□□□ -0.43
GGA3-219ENST00000584550 FAM184BQ9ULE4 1060 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 DDX19BQ9UMR2 479 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 MROH7Q68CQ1 1323 aa12.34□□□□□ -0.43
GGA3-219ENST00000584550 PARP14Q460N5 1801 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 RFXAPO00287 272 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 SNAI1O95863 264 aaPredicted RBP12.33□□□□□ -0.44
GGA3-219ENST00000584550 FGBP02675 491 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 STAT3P40763 770 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 ATP8B2P98198 1209 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 GABPAQ06546 454 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 RIOX2Q8IUF8 465 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 HERVK_113Q902F9 699 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 DYNLL2Q96FJ2 89 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 ZNF512BQ96KM6 892 aaPredicted RBP12.33□□□□□ -0.44
GGA3-219ENST00000584550 ARHGEF10LQ9HCE6 1279 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 IL23AQ9NPF7 189 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 GPR108Q9NPR9 543 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 DIS3Q9Y2L1 958 aaKnown RBP12.33□□□□□ -0.44
GGA3-219ENST00000584550 NAV1Q8NEY1 1877 aa12.33□□□□□ -0.44
GGA3-219ENST00000584550 MAGEB6P1A0A0J9YX57 407 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 FAM86C2PA6NEL3 165 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 ARVCFO00192 962 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 ADCY6O43306 1168 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 SURF6O75683 361 aaKnown RBP12.32□□□□□ -0.44
GGA3-219ENST00000584550 AKR1B1P15121 316 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 CCL23P55773 120 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 AAK1Q2M2I8 961 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 GNASQ5JWF2 1037 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 TMEM179Q6ZVK1 233 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 CERS3Q8IU89 383 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 FAM126BQ8IXS8 530 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 SDR42E1Q8WUS8 393 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 RIOK1Q9BRS2 568 aaKnown RBP12.32□□□□□ -0.44
GGA3-219ENST00000584550 VCPKMTQ9H867 229 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 CERS4Q9HA82 394 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 TMX2Q9Y320 296 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 ELP1O95163 1332 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 UMODL1Q5DID0 1318 aa12.32□□□□□ -0.44
GGA3-219ENST00000584550 ROBO3Q96MS0 1386 aa12.31□□□□□ -0.44
GGA3-219ENST00000584550 A0A0U1RQG5 324 aaPredicted RBP12.31□□□□□ -0.44
GGA3-219ENST00000584550 VWA5AO00534 786 aa12.31□□□□□ -0.44
GGA3-219ENST00000584550 WDR46O15213 610 aaKnown RBP12.31□□□□□ -0.44
GGA3-219ENST00000584550 TLR3O15455 904 aaKnown RBP12.31□□□□□ -0.44
GGA3-219ENST00000584550 DUSP11O75319 330 aaKnown RBP12.31□□□□□ -0.44
GGA3-219ENST00000584550 RRP1P56182 461 aaKnown RBP12.31□□□□□ -0.44
GGA3-219ENST00000584550 ICA1Q05084 483 aa12.31□□□□□ -0.44
GGA3-219ENST00000584550 TMEM31Q5JXX7 168 aa12.31□□□□□ -0.44
GGA3-219ENST00000584550 ALYREFQ86V81 257 aaKnown RBP12.31□□□□□ -0.44
GGA3-219ENST00000584550 PCSK9Q8NBP7 692 aaKnown RBP12.31□□□□□ -0.44
GGA3-219ENST00000584550 DDX11Q96FC9 970 aa12.31□□□□□ -0.44
GGA3-219ENST00000584550 MTIF3Q9H2K0 278 aaKnown RBP12.31□□□□□ -0.44
GGA3-219ENST00000584550 ADAMTS5Q9UNA0 930 aa12.31□□□□□ -0.44
GGA3-219ENST00000584550 TRANK1O15050 2925 aa12.31□□□□□ -0.44
GGA3-219ENST00000584550 SYNGAP1Q96PV0 1343 aa12.31□□□□□ -0.44
GGA3-219ENST00000584550 ZBBXA8MT70 800 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 SMIM22K7EJ46 135 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 IGSF3O75054 1194 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 BEX3Q00994 111 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 ACVR2BQ13705 512 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 POLA2Q14181 598 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 CCDC144BQ3MJ40 725 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 KRT40Q6A162 431 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 CEP85Q6P2H3 762 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.44
GGA3-219ENST00000584550 EAF2Q96CJ1 260 aaPredicted RBP12.3□□□□□ -0.44
GGA3-219ENST00000584550 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
GGA3-219ENST00000584550 HIPK3Q9H422 1215 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
GGA3-219ENST00000584550 SH2D4AQ9H788 454 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 SPC25Q9HBM1 224 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 ZBTB40Q9NUA8 1239 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 ZNF214Q9UL59 606 aaPredicted RBP12.3□□□□□ -0.44
GGA3-219ENST00000584550 RIPK3Q9Y572 518 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 SLC4A7Q9Y6M7 1214 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 MYH8P13535 1937 aa12.3□□□□□ -0.44
GGA3-219ENST00000584550 ERC2O15083 957 aa12.29□□□□□ -0.44
GGA3-219ENST00000584550 CD4P01730 458 aa12.29□□□□□ -0.44
GGA3-219ENST00000584550 EEF2P13639 858 aaKnown RBP12.29□□□□□ -0.44
GGA3-219ENST00000584550 FAM83BQ5T0W9 1011 aa12.29□□□□□ -0.44
GGA3-219ENST00000584550 SSH3Q8TE77 659 aa12.29□□□□□ -0.44
GGA3-219ENST00000584550 PPP1R9AQ9ULJ8 1098 aa12.29□□□□□ -0.44
GGA3-219ENST00000584550 ARIH1Q9Y4X5 557 aaPredicted RBP12.29□□□□□ -0.44
GGA3-219ENST00000584550 MTCH2Q9Y6C9 303 aa12.29□□□□□ -0.44
GGA3-219ENST00000584550 CYP2D7A0A087X1C5 515 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 TLL1O43897 1013 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 CST5P28325 142 aaPredicted RBP12.28□□□□□ -0.44
GGA3-219ENST00000584550 GJA9P57773 515 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 SLC9C2Q5TAH2 1124 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 SNRNP48Q6IEG0 339 aaKnown RBP12.28□□□□□ -0.44
GGA3-219ENST00000584550 CXCL17Q6UXB2 119 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 NOL8Q76FK4 1167 aaKnown RBP12.28□□□□□ -0.44
GGA3-219ENST00000584550 CPXCR1Q8N123 301 aa12.28□□□□□ -0.44
GGA3-219ENST00000584550 LCORLQ8N3X6 602 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms