RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CRISPLD2Q9H0B8 497 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 SLC5A4Q9NY91 659 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 FLRT1Q9NZU1 646 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 MTMR7Q9Y216 660 aa24.12■■□□□ 1.45
SS18-224ENST00000584083 TMEM232C9JQI7 657 aa24.11■■□□□ 1.45
SS18-224ENST00000584083 COPB2P35606 906 aa24.11■■□□□ 1.45
SS18-224ENST00000584083 PRPF38BQ5VTL8 546 aaKnown RBP24.11■■□□□ 1.45
SS18-224ENST00000584083 CPXCR1Q8N123 301 aa24.11■■□□□ 1.45
SS18-224ENST00000584083 RUFY2Q8WXA3 655 aa24.11■■□□□ 1.45
SS18-224ENST00000584083 MMP19Q99542 508 aa24.11■■□□□ 1.45
SS18-224ENST00000584083 TEX13BQ9BXU2 312 aa24.11■■□□□ 1.45
SS18-224ENST00000584083 CTNNA3Q9UI47 895 aa24.11■■□□□ 1.45
SS18-224ENST00000584083 COBLO75128 1261 aa24.1■■□□□ 1.45
SS18-224ENST00000584083 SNRNP48Q6IEG0 339 aaKnown RBP24.1■■□□□ 1.45
SS18-224ENST00000584083 CHURC1Q8WUH1 139 aa24.1■■□□□ 1.45
SS18-224ENST00000584083 CCND3P30281 292 aaPredicted RBP24.09■■□□□ 1.45
SS18-224ENST00000584083 CYP2C19P33261 490 aa24.09■■□□□ 1.45
SS18-224ENST00000584083 STAT2P52630 851 aa24.09■■□□□ 1.45
SS18-224ENST00000584083 KCTD2Q14681 263 aa24.09■■□□□ 1.45
SS18-224ENST00000584083 IMMTQ16891 758 aaKnown RBP24.09■■□□□ 1.45
SS18-224ENST00000584083 RCSD1Q6JBY9 416 aa24.09■■□□□ 1.45
SS18-224ENST00000584083 FAM160B2Q86V87 743 aa24.09■■□□□ 1.45
SS18-224ENST00000584083 ESR2Q92731 530 aa24.09■■□□□ 1.45
SS18-224ENST00000584083 SLC38A10Q9HBR0 1119 aa24.09■■□□□ 1.45
SS18-224ENST00000584083 TCP11L1Q9NUJ3 509 aa24.09■■□□□ 1.45
SS18-224ENST00000584083 TOP1P11387 765 aaKnown RBP24.08■■□□□ 1.45
SS18-224ENST00000584083 CHMLP26374 656 aa24.08■■□□□ 1.45
SS18-224ENST00000584083 NOVP48745 357 aa24.08■■□□□ 1.45
SS18-224ENST00000584083 KCTD1Q719H9 257 aa24.08■■□□□ 1.45
SS18-224ENST00000584083 UBE2Q1Q7Z7E8 422 aa24.08■■□□□ 1.45
SS18-224ENST00000584083 IL25Q9H293 177 aa24.08■■□□□ 1.45
SS18-224ENST00000584083 RAVER2Q9HCJ3 691 aaKnown RBP24.08■■□□□ 1.45
SS18-224ENST00000584083 PLXNA1Q9UIW2 1896 aa24.08■■□□□ 1.45
SS18-224ENST00000584083 NEDD4P46934 1319 aa24.08■■□□□ 1.44
SS18-224ENST00000584083 RAD50Q92878 1312 aa24.08■■□□□ 1.44
SS18-224ENST00000584083 CCDC96Q2M329 555 aa24.07■■□□□ 1.44
SS18-224ENST00000584083 OLFML2BQ68BL8 750 aa24.07■■□□□ 1.44
SS18-224ENST00000584083 DPF3Q92784 378 aa24.07■■□□□ 1.44
SS18-224ENST00000584083 TMEM47Q9BQJ4 181 aa24.07■■□□□ 1.44
SS18-224ENST00000584083 RIPK3Q9Y572 518 aa24.07■■□□□ 1.44
SS18-224ENST00000584083 ATP2A1O14983 1001 aa24.06■■□□□ 1.44
SS18-224ENST00000584083 FDX1P10109 184 aa24.06■■□□□ 1.44
SS18-224ENST00000584083 CNGA1P29973 690 aa24.06■■□□□ 1.44
SS18-224ENST00000584083 CENPQQ7L2Z9 268 aaPredicted RBP24.06■■□□□ 1.44
SS18-224ENST00000584083 ANKLE1Q8NAG6 615 aa24.06■■□□□ 1.44
SS18-224ENST00000584083 DCAF4Q8WV16 495 aa24.06■■□□□ 1.44
SS18-224ENST00000584083 HTATIP2Q9BUP3 242 aa24.06■■□□□ 1.44
SS18-224ENST00000584083 PGK2P07205 417 aa24.05■■□□□ 1.44
SS18-224ENST00000584083 OAZ1P54368 228 aa24.05■■□□□ 1.44
SS18-224ENST00000584083 RASGRP2Q7LDG7 609 aa24.05■■□□□ 1.44
SS18-224ENST00000584083 PAWRQ96IZ0 340 aaKnown RBP24.05■■□□□ 1.44
SS18-224ENST00000584083 MAML3Q96JK9 1138 aa24.05■■□□□ 1.44
SS18-224ENST00000584083 TTC14Q96N46 770 aa24.05■■□□□ 1.44
SS18-224ENST00000584083 ZKSCAN3Q9BRR0 538 aa24.05■■□□□ 1.44
SS18-224ENST00000584083 OGDHLQ9ULD0 1010 aa24.05■■□□□ 1.44
SS18-224ENST00000584083 B4E1Z4 1266 aa24.04■■□□□ 1.44
SS18-224ENST00000584083 PLA2G6O60733 806 aa24.04■■□□□ 1.44
SS18-224ENST00000584083 KDM4AO75164 1064 aa24.04■■□□□ 1.44
SS18-224ENST00000584083 NECAB2Q7Z6G3 386 aa24.04■■□□□ 1.44
SS18-224ENST00000584083 DDX11Q96FC9 970 aa24.04■■□□□ 1.44
SS18-224ENST00000584083 NT5C2P49902 561 aa24.03■■□□□ 1.44
SS18-224ENST00000584083 IQCA1Q86XH1 822 aa24.03■■□□□ 1.44
SS18-224ENST00000584083 DIS3LQ8TF46 1054 aaKnown RBP24.03■■□□□ 1.44
SS18-224ENST00000584083 PRR12Q9ULL5 1215 aa24.03■■□□□ 1.44
SS18-224ENST00000584083 FRMPD3Q5JV73 1810 aa24.03■■□□□ 1.44
SS18-224ENST00000584083 IGHA2P01877 340 aa24.02■■□□□ 1.44
SS18-224ENST00000584083 CCDC178Q5BJE1 867 aa24.02■■□□□ 1.44
SS18-224ENST00000584083 LHX8Q68G74 356 aa24.02■■□□□ 1.44
SS18-224ENST00000584083 TRPV1Q8NER1 839 aa24.02■■□□□ 1.44
SS18-224ENST00000584083 KRT23Q9C075 422 aa24.02■■□□□ 1.44
SS18-224ENST00000584083 GPCPD1Q9NPB8 672 aa24.02■■□□□ 1.44
SS18-224ENST00000584083 HOMER2Q9NSB8 354 aa24.02■■□□□ 1.44
SS18-224ENST00000584083 FBXO40Q9UH90 709 aa24.02■■□□□ 1.44
SS18-224ENST00000584083 FRMPD2Q68DX3 1309 aaPredicted RBP24.02■■□□□ 1.44
SS18-224ENST00000584083 CYBAP13498 195 aa24.01■■□□□ 1.43
SS18-224ENST00000584083 SNAP25P60880 206 aa24.01■■□□□ 1.43
SS18-224ENST00000584083 PTH1RQ03431 593 aa24.01■■□□□ 1.43
SS18-224ENST00000584083 ZNF792Q3KQV3 632 aa24.01■■□□□ 1.43
SS18-224ENST00000584083 TTBK2Q6IQ55 1244 aa24.01■■□□□ 1.43
SS18-224ENST00000584083 CCDC174Q6PII3 467 aa24.01■■□□□ 1.43
SS18-224ENST00000584083 CHST13Q8NET6 341 aa24.01■■□□□ 1.43
SS18-224ENST00000584083 CNNM2Q9H8M5 875 aa24.01■■□□□ 1.43
SS18-224ENST00000584083 ZSWIM5Q9P217 1185 aa24.01■■□□□ 1.43
SS18-224ENST00000584083 DDX20Q9UHI6 824 aaKnown RBP24.01■■□□□ 1.43
SS18-224ENST00000584083 DIS3Q9Y2L1 958 aaKnown RBP24.01■■□□□ 1.43
SS18-224ENST00000584083 SGSM2O43147 1006 aa24■■□□□ 1.43
SS18-224ENST00000584083 MSCO60682 206 aa24■■□□□ 1.43
SS18-224ENST00000584083 SLC16A2P36021 539 aa24■■□□□ 1.43
SS18-224ENST00000584083 PRAMEF19Q5SWL8 479 aa24■■□□□ 1.43
SS18-224ENST00000584083 DGKHQ86XP1 1220 aa24■■□□□ 1.43
SS18-224ENST00000584083 ANKRD35Q8N283 1001 aa24■■□□□ 1.43
SS18-224ENST00000584083 AGBL1Q96MI9 1066 aa24■■□□□ 1.43
SS18-224ENST00000584083 U3KPZ7 1027 aaPredicted RBP24■■□□□ 1.43
SS18-224ENST00000584083 PDHBP11177 359 aa23.99■■□□□ 1.43
SS18-224ENST00000584083 ZSCAN10Q96SZ4 725 aaPredicted RBP23.99■■□□□ 1.43
SS18-224ENST00000584083 TINF2Q9BSI4 451 aa23.99■■□□□ 1.43
SS18-224ENST00000584083 SMCHD1A6NHR9 2005 aa23.98■■□□□ 1.43
SS18-224ENST00000584083 ALAS1P13196 640 aa23.98■■□□□ 1.43
SS18-224ENST00000584083 MNX1P50219 401 aaPredicted RBP23.98■■□□□ 1.43
SS18-224ENST00000584083 SYDE2Q5VT97 1194 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms