RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 SDR42E1Q8WUS8 393 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 DDRGK1Q96HY6 314 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ASB2Q96Q27 587 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PBX4Q9BYU1 374 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 MTIF3Q9H2K0 278 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 KANSL2Q9H9L4 492 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 MSRAQ9UJ68 235 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ZNF214Q9UL59 606 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 PPP1R9AQ9ULJ8 1098 aa14.72□□□□□ -0.05
CDK5RAP3-216ENST00000579853 ZNF532Q9HCE3 1301 aa14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TLR3O15455 904 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 AKR1B1P15121 316 aa14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 CST5P28325 142 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TMEM240Q5SV17 173 aa14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 RASIP1Q5U651 963 aa14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 MAMDC4Q6UXC1 1216 aa14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 DDX11Q96FC9 970 aa14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TEX13BQ9BXU2 312 aa14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 C1orf115Q9H7X2 142 aa14.71□□□□□ -0.05
CDK5RAP3-216ENST00000579853 A0A0U1RQG5 324 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 EEF2P13639 858 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CDK8P49336 464 aa14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CDK7P50613 346 aa14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CCSAPQ6IQ19 270 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ZNF467Q7Z7K2 595 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 LCORLQ8N3X6 602 aa14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ADAMTS19Q8TE59 1207 aa14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 PPM1EQ8WY54 764 aa14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 VTI1AQ96AJ9 217 aa14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 DYNLL2Q96FJ2 89 aa14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 PRDM12Q9H4Q4 367 aa14.7□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ARVCFO00192 962 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 C6orf222P0C671 652 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CYP2D6P10635 497 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 EVX2Q03828 476 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 C12orf60Q5U649 245 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 C16orf86Q6ZW13 317 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 C16orf59Q7L2K0 433 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CLEC10AQ8IUN9 316 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ITPRIPQ8IWB1 547 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 REPS2Q8NFH8 660 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 UHRF1Q96T88 793 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ABHD16BQ9H3Z7 469 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 FBXO28Q9NVF7 368 aa14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ZHX1Q9UKY1 873 aaPredicted RBP14.69□□□□□ -0.06
CDK5RAP3-216ENST00000579853 TCRBV5S4A2TA0A5A2 114 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 GOLIM4O00461 696 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 RAD21O60216 631 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 SNAI1O95863 264 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ASGR1P07306 291 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CSF2RAP15509 400 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ACVR2BQ13705 512 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 SNRNP48Q6IEG0 339 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ZNF365Q70YC5 407 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CLASRPQ8N2M8 674 aaKnown RBP14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 LENG1Q96BZ8 264 aaPredicted RBP14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 SLF1Q9BQI6 1058 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 SEZ6LQ9BYH1 1024 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.064e-14■■□□□ 11.6
CDK5RAP3-216ENST00000579853 ARMT1Q9H993 441 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 SLC28A3Q9HAS3 691 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 IL23AQ9NPF7 189 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 EXOC6BQ9Y2D4 811 aa14.68□□□□□ -0.06
CDK5RAP3-216ENST00000579853 DNAJC25-GNG10A0A024R161 153 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 APBB1O00213 710 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ATP2A1O14983 1001 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 PLA2G5P39877 138 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 GJA9P57773 515 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 GNASQ5JWF2 1037 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 FAM83BQ5T0W9 1011 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CEP85Q6P2H3 762 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 PRPF38AQ8NAV1 312 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 HERVK_113Q902F9 699 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 DNAJC2Q99543 621 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 UPF3AQ9H1J1 476 aaKnown RBP14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 FBXO40Q9UH90 709 aa14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CTDP1Q9Y5B0 961 aaPredicted RBP14.67□□□□□ -0.06
CDK5RAP3-216ENST00000579853 BAZ2AQ9UIF9 1905 aaKnown RBP14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 USP17L12C9JPN9 530 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 USP17L21D6R901 530 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ZBED4O75132 1171 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 CABYRO75952 493 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 MBD4O95243 580 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 FGBP02675 491 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 IGFBP4P22692 258 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 PBX2P40425 430 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 AAK1Q2M2I8 961 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 FAM126BQ8IXS8 530 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 RHPN1Q8TCX5 695 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 FAM122AQ96E09 287 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 C1QTNF1Q9BXJ1 281 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 PPP1R12CQ9BZL4 782 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 IL1RAPL2Q9NP60 686 aa14.66□□□□□ -0.06
CDK5RAP3-216ENST00000579853 PRKAB2O43741 272 aa14.65□□□□□ -0.06
CDK5RAP3-216ENST00000579853 IFIT2P09913 472 aaKnown RBP14.65□□□□□ -0.06
CDK5RAP3-216ENST00000579853 ADD2P35612 726 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms