RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 APOA5Q6Q788 366 aa16.91■□□□□ 0.3
NPLOC4-218ENST00000574964 ANKRD13CQ8N6S4 541 aa16.91■□□□□ 0.3
NPLOC4-218ENST00000574964 MAP3K14Q99558 947 aa16.91■□□□□ 0.3
NPLOC4-218ENST00000574964 AGXT2Q9BYV1 514 aa16.91■□□□□ 0.3
NPLOC4-218ENST00000574964 TSKSQ9UJT2 592 aa16.91■□□□□ 0.3
NPLOC4-218ENST00000574964 DOCK3Q8IZD9 2030 aa16.91■□□□□ 0.3
NPLOC4-218ENST00000574964 GOLGA8AA7E2F4 631 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 GOLGA8BA8MQT2 603 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 KLRF2D3W0D1 207 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 PLA2G6O60733 806 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 FDX1P10109 184 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 SLC16A2P36021 539 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 GNAQP50148 359 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 TOB2Q14106 344 aaPredicted RBP16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 PLS1Q14651 629 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 RTN1Q16799 776 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 SYDE2Q5VT97 1194 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 STAG2Q8N3U4 1231 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 MB21D1Q8N884 522 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 FANCBQ8NB91 859 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 KIF2CQ99661 725 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 LARP6Q9BRS8 491 aaKnown RBP16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 CFHR5Q9BXR6 569 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 UBA5Q9GZZ9 404 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 ALDH8A1Q9H2A2 487 aaPredicted RBP16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 PRR12Q9ULL5 1215 aa16.9■□□□□ 0.3
NPLOC4-218ENST00000574964 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 PALM3A6NDB9 673 aaPredicted RBP16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 ST18O60284 1047 aa16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 METAP2P50579 478 aaKnown RBP eCLIP16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 AK2P54819 239 aa16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 BTNL9Q6UXG8 535 aa16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 LBX2Q6XYB7 198 aa16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 CCAR1Q8IX12 1150 aaKnown RBP16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 VAT1LQ9HCJ6 419 aa16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 RBM28Q9NW13 759 aaKnown RBP16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 MAD2L2Q9UI95 211 aa16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
NPLOC4-218ENST00000574964 ZNFX1Q9P2E3 1918 aaKnown RBP16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 CCDC196A0A1B0GTZ2 297 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 GPR25O00155 361 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 VWA5AO00534 786 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 RCAN1P53805 252 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 C17orf99Q6UX52 265 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 CPXCR1Q8N123 301 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 GPRC5AQ8NFJ5 357 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 LZTS2Q9BRK4 669 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 CPVLQ9H3G5 476 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 CWC22Q9HCG8 908 aaKnown RBP16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 RBPJLQ9UBG7 517 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 ADGRA2Q96PE1 1338 aa16.88■□□□□ 0.29
NPLOC4-218ENST00000574964 A0A0G2JMZ2 1700 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 ECM2O94769 699 aaPredicted RBP16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 BCRP11274 1271 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 CTCFP49711 727 aaPredicted RBP16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 ERVK-9P63128 1117 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 ERVK-24P63145 666 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 CCT2P78371 535 aaKnown RBP16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 CCNA1P78396 465 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 SP3Q02447 781 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 KIF22Q14807 665 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 PPP2R5BQ15173 497 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 FAM110CQ1W6H9 321 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 CCDC174Q6PII3 467 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 IL27Q8NEV9 243 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 ZNF274Q96GC6 653 aaPredicted RBP16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 ADAMTS5Q9UNA0 930 aa16.87■□□□□ 0.29
NPLOC4-218ENST00000574964 FOXN1O15353 648 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 PEX10O60683 326 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 FKTNO75072 461 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 PDIA3P30101 505 aaKnown RBP16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 EVCP57679 992 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 SNAP25P60880 206 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 STK3Q13188 491 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 WDR78Q5VTH9 848 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 ADGRF4Q8IZF3 695 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 SLKQ9H2G2 1235 aaPredicted RBP16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 SLC38A10Q9HBR0 1119 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 TXNRD2Q9NNW7 524 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 BTBD7Q9P203 1132 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 MORF4L1Q9UBU8 362 aa16.86■□□□□ 0.29
NPLOC4-218ENST00000574964 CPLX1O14810 134 aa16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 STAT3P40763 770 aa16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 TMEM132BQ14DG7 1078 aa16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 Q3C1V9 767 aa16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 CPLX2Q6PUV4 134 aaKnown RBP16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 HOMER1Q86YM7 354 aa16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 CCDC82Q8N4S0 544 aa16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 PIBF1Q8WXW3 757 aa16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 ERO1AQ96HE7 468 aa16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 SPATC1LQ9H0A9 340 aa16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 RAVER2Q9HCJ3 691 aaKnown RBP16.85■□□□□ 0.29
NPLOC4-218ENST00000574964 CNMDO75829 334 aa16.84■□□□□ 0.29
NPLOC4-218ENST00000574964 PLEKHA8P1O95397 391 aa16.84■□□□□ 0.29
NPLOC4-218ENST00000574964 HSPA8P11142 646 aaKnown RBP16.84■□□□□ 0.29
NPLOC4-218ENST00000574964 SMARCA1P28370 1054 aa16.84■□□□□ 0.29
NPLOC4-218ENST00000574964 OAZ1P54368 228 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms