RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 MFSD5Q6N075 450 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 C16orf59Q7L2K0 433 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 ZNF467Q7Z7K2 595 aaPredicted RBP15.38■□□□□ 0.05
RNF40-208ENST00000565995 YTHDC1Q96MU7 727 aaKnown RBP15.38■□□□□ 0.05
RNF40-208ENST00000565995 ARMT1Q9H993 441 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 GOPCQ9HD26 462 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 STARD7Q9NQZ5 370 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 FAM184BQ9ULE4 1060 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 CNPY2Q9Y2B0 182 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 MROH7Q68CQ1 1323 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 SYNRGQ9UMZ2 1314 aa15.38■□□□□ 0.05
RNF40-208ENST00000565995 LCTP09848 1927 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 USP17L12C9JPN9 530 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 USP17L21D6R901 530 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 SMIM22K7EJ46 135 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 ATP2A1O14983 1001 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 PRKAB2O43741 272 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 NKX3-2P78367 333 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 KCNA10Q16322 511 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 CLASRPQ8N2M8 674 aaKnown RBP15.37■□□□□ 0.05
RNF40-208ENST00000565995 USP38Q8NB14 1042 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 KIF1BPQ96EK5 621 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.37■□□□□ 0.055e-10■■■■□ 19.9
RNF40-208ENST00000565995 IL1RAPL2Q9NP60 686 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 LRRC37A2A6NM11 1700 aa15.37■□□□□ 0.05
RNF40-208ENST00000565995 XIRP2A4UGR9 3374 aa15.36■□□□□ 0.05
RNF40-208ENST00000565995 TNFRSF10AO00220 468 aa15.36■□□□□ 0.05
RNF40-208ENST00000565995 MBD4O95243 580 aa15.36■□□□□ 0.05
RNF40-208ENST00000565995 TMEM240Q5SV17 173 aa15.36■□□□□ 0.05
RNF40-208ENST00000565995 AKNAD1Q5T1N1 836 aa15.36■□□□□ 0.05
RNF40-208ENST00000565995 TIFAQ96CG3 184 aa15.36■□□□□ 0.05
RNF40-208ENST00000565995 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.36■□□□□ 0.05
RNF40-208ENST00000565995 UPF3AQ9H1J1 476 aaKnown RBP15.36■□□□□ 0.05
RNF40-208ENST00000565995 CYP2D7A0A087X1C5 515 aa15.35■□□□□ 0.05
RNF40-208ENST00000565995 ATP5JP18859 108 aa15.35■□□□□ 0.05
RNF40-208ENST00000565995 PPIGQ13427 754 aaKnown RBP eCLIP15.35■□□□□ 0.058e-7■■□□□ 13.7
RNF40-208ENST00000565995 UBE3CQ15386 1083 aa15.35■□□□□ 0.05
RNF40-208ENST00000565995 CTR9Q6PD62 1173 aa15.35■□□□□ 0.05
RNF40-208ENST00000565995 CCDC174Q6PII3 467 aa15.35■□□□□ 0.05
RNF40-208ENST00000565995 AMOTL1Q8IY63 956 aa15.35■□□□□ 0.05
RNF40-208ENST00000565995 PCSK9Q8NBP7 692 aaKnown RBP15.35■□□□□ 0.05
RNF40-208ENST00000565995 ATXN2LQ8WWM7 1075 aaKnown RBP15.35■□□□□ 0.05
RNF40-208ENST00000565995 LENG1Q96BZ8 264 aaPredicted RBP15.35■□□□□ 0.05
RNF40-208ENST00000565995 DNAJC2Q99543 621 aaKnown RBP15.35■□□□□ 0.05
RNF40-208ENST00000565995 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
RNF40-208ENST00000565995 PAG1Q9NWQ8 432 aa15.35■□□□□ 0.05
RNF40-208ENST00000565995 GJA9P57773 515 aa15.34■□□□□ 0.05
RNF40-208ENST00000565995 FAM83BQ5T0W9 1011 aa15.34■□□□□ 0.05
RNF40-208ENST00000565995 RPAP2Q8IXW5 612 aaPredicted RBP15.34■□□□□ 0.05
RNF40-208ENST00000565995 PRPF38AQ8NAV1 312 aaKnown RBP15.34■□□□□ 0.05
RNF40-208ENST00000565995 GLT1D1Q96MS3 346 aa15.34■□□□□ 0.05
RNF40-208ENST00000565995 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
RNF40-208ENST00000565995 PBX4Q9BYU1 374 aa15.34■□□□□ 0.05
RNF40-208ENST00000565995 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.34■□□□□ 0.052e-6■□□□□ 10.4
RNF40-208ENST00000565995 ABHD16BQ9H3Z7 469 aa15.34■□□□□ 0.05
RNF40-208ENST00000565995 NYAP2Q9P242 653 aa15.34■□□□□ 0.05
RNF40-208ENST00000565995 RIPK3Q9Y572 518 aa15.34■□□□□ 0.05
RNF40-208ENST00000565995 SCN5AQ14524 2016 aa15.34■□□□□ 0.05
RNF40-208ENST00000565995 MYADML2A6NDP7 307 aa15.33■□□□□ 0.04
RNF40-208ENST00000565995 ARVCFO00192 962 aa15.33■□□□□ 0.04
RNF40-208ENST00000565995 ASGR1P07306 291 aa15.33■□□□□ 0.04
RNF40-208ENST00000565995 IFIT2P09913 472 aaKnown RBP15.33■□□□□ 0.04
RNF40-208ENST00000565995 ACVR2BQ13705 512 aa15.33■□□□□ 0.04
RNF40-208ENST00000565995 SLFNL1Q499Z3 407 aa15.33■□□□□ 0.04
RNF40-208ENST00000565995 SBK1Q52WX2 424 aa15.33■□□□□ 0.04
RNF40-208ENST00000565995 SAMD1Q6SPF0 538 aaPredicted RBP15.33■□□□□ 0.04
RNF40-208ENST00000565995 HAUS7Q99871 368 aa15.33■□□□□ 0.04
RNF40-208ENST00000565995 TRIP12Q14669 1992 aaPredicted RBP15.33■□□□□ 0.04
RNF40-208ENST00000565995 CTAGE5O15320 804 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 ADCY6O43306 1168 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 RAB11FIP3O75154 756 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 CD4P01730 458 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 SNRNP48Q6IEG0 339 aaKnown RBP15.32■□□□□ 0.04
RNF40-208ENST00000565995 FAM126BQ8IXS8 530 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 TMEM199Q8N511 208 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 SLC43A3Q8NBI5 491 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 MKL1Q969V6 931 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 DDX11Q96FC9 970 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 DDRGK1Q96HY6 314 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 FGD4Q96M96 766 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 GAS2L1Q99501 681 aaPredicted RBP15.32■□□□□ 0.04
RNF40-208ENST00000565995 KATNBL1Q9H079 304 aa15.32■□□□□ 0.04
RNF40-208ENST00000565995 A0A0U1RQG5 324 aaPredicted RBP15.31■□□□□ 0.04
RNF40-208ENST00000565995 F5H6K3 240 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 CSF2RAP15509 400 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 COL9A1P20849 921 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 RASA1P20936 1047 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 PBX2P40425 430 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 KLRC3Q07444 240 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 CCDC144BQ3MJ40 725 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 GIMAP6Q6P9H5 292 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 PSRC1Q6PGN9 363 aaPredicted RBP15.31■□□□□ 0.04
RNF40-208ENST00000565995 ZNF365Q70YC5 407 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 SIRT2Q8IXJ6 389 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 HERVK_113Q902F9 699 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 ASB2Q96Q27 587 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 SEZ6LQ9BYH1 1024 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 SLC38A10Q9HBR0 1119 aa15.31■□□□□ 0.04
RNF40-208ENST00000565995 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.31■□□□□ 0.04
RNF40-208ENST00000565995 ARPP21Q9UBL0 812 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms