RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 PAK6Q9NQU5 681 aaPredicted RBP23.41■■□□□ 1.34
CMTM3-207ENST00000564060 ZNF214Q9UL59 606 aaPredicted RBP23.41■■□□□ 1.34
CMTM3-207ENST00000564060 PDE4DIPQ5VU43 2346 aa23.41■■□□□ 1.34
CMTM3-207ENST00000564060 NEDD4P46934 1319 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 ATP2A1O14983 1001 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 SGPL1O95470 568 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 FCER1AP12319 257 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 ADORA2AP29274 412 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 IKQ13123 557 aaPredicted RBP23.4■■□□□ 1.34
CMTM3-207ENST00000564060 MFSD14CQ5VZR4 134 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 REPS2Q8NFH8 660 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 DCAF4Q8WV16 495 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 KIFC2Q96AC6 838 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 KRT23Q9C075 422 aa23.4■■□□□ 1.34
CMTM3-207ENST00000564060 TMEM232C9JQI7 657 aa23.39■■□□□ 1.33
CMTM3-207ENST00000564060 PLA2G6O60733 806 aa23.39■■□□□ 1.33
CMTM3-207ENST00000564060 PRKAR2AP13861 404 aaKnown RBP23.39■■□□□ 1.33
CMTM3-207ENST00000564060 MCCP23508 829 aa23.39■■□□□ 1.33
CMTM3-207ENST00000564060 OAZ1P54368 228 aa23.39■■□□□ 1.33
CMTM3-207ENST00000564060 IL25Q9H293 177 aa23.39■■□□□ 1.33
CMTM3-207ENST00000564060 FRMPD3Q5JV73 1810 aa23.38■■□□□ 1.33
CMTM3-207ENST00000564060 SGSM2O43147 1006 aa23.38■■□□□ 1.33
CMTM3-207ENST00000564060 MAP3K21Q5TCX8 1036 aa23.38■■□□□ 1.33
CMTM3-207ENST00000564060 SNRNP48Q6IEG0 339 aaKnown RBP23.38■■□□□ 1.33
CMTM3-207ENST00000564060 RCSD1Q6JBY9 416 aa23.38■■□□□ 1.33
CMTM3-207ENST00000564060 SHISA4Q96DD7 197 aa23.38■■□□□ 1.33
CMTM3-207ENST00000564060 DEFB118Q96PH6 123 aa23.38■■□□□ 1.33
CMTM3-207ENST00000564060 SLC38A10Q9HBR0 1119 aa23.38■■□□□ 1.33
CMTM3-207ENST00000564060 TNRC18O15417 2968 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-207ENST00000564060 KCTD2Q14681 263 aa23.37■■□□□ 1.33
CMTM3-207ENST00000564060 CCL14Q16627 93 aa23.37■■□□□ 1.33
CMTM3-207ENST00000564060 BMP2KLQ5H9B9 411 aa23.37■■□□□ 1.33
CMTM3-207ENST00000564060 MMP19Q99542 508 aa23.37■■□□□ 1.33
CMTM3-207ENST00000564060 TMEM47Q9BQJ4 181 aa23.37■■□□□ 1.33
CMTM3-207ENST00000564060 U3KPZ7 1027 aaPredicted RBP23.37■■□□□ 1.33
CMTM3-207ENST00000564060 KDM4AO75164 1064 aa23.36■■□□□ 1.33
CMTM3-207ENST00000564060 TRIM32Q13049 653 aa23.36■■□□□ 1.33
CMTM3-207ENST00000564060 CCDC96Q2M329 555 aa23.36■■□□□ 1.33
CMTM3-207ENST00000564060 OLFML2BQ68BL8 750 aa23.36■■□□□ 1.33
CMTM3-207ENST00000564060 DGKHQ86XP1 1220 aa23.36■■□□□ 1.33
CMTM3-207ENST00000564060 B4E1Z4 1266 aa23.35■■□□□ 1.33
CMTM3-207ENST00000564060 TFRCP02786 760 aaKnown RBP23.35■■□□□ 1.33
CMTM3-207ENST00000564060 CACNB2Q08289 660 aaPredicted RBP23.35■■□□□ 1.33
CMTM3-207ENST00000564060 TRDNQ13061 729 aa23.35■■□□□ 1.33
CMTM3-207ENST00000564060 KIAA1211Q6ZU35 1233 aa23.35■■□□□ 1.33
CMTM3-207ENST00000564060 KCTD1Q719H9 257 aa23.35■■□□□ 1.33
CMTM3-207ENST00000564060 CPXCR1Q8N123 301 aa23.35■■□□□ 1.33
CMTM3-207ENST00000564060 NPLOC4Q8TAT6 608 aa23.35■■□□□ 1.33
CMTM3-207ENST00000564060 FBXO40Q9UH90 709 aa23.35■■□□□ 1.33
CMTM3-207ENST00000564060 MTMR7Q9Y216 660 aa23.35■■□□□ 1.33
CMTM3-207ENST00000564060 CRISPLD2Q9H0B8 497 aa23.34■■□□□ 1.33
CMTM3-207ENST00000564060 CENPBP07199 599 aaPredicted RBP23.33■■□□□ 1.33
CMTM3-207ENST00000564060 ANKLE1Q8NAG6 615 aa23.33■■□□□ 1.33
CMTM3-207ENST00000564060 CHST13Q8NET6 341 aa23.33■■□□□ 1.33
CMTM3-207ENST00000564060 ZSCAN10Q96SZ4 725 aaPredicted RBP23.33■■□□□ 1.33
CMTM3-207ENST00000564060 UBAC1Q9BSL1 405 aa23.33■■□□□ 1.33
CMTM3-207ENST00000564060 RAVER2Q9HCJ3 691 aaKnown RBP23.33■■□□□ 1.33
CMTM3-207ENST00000564060 DIS3Q9Y2L1 958 aaKnown RBP23.33■■□□□ 1.33
CMTM3-207ENST00000564060 MYH6P13533 1939 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 MSCO60682 206 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 COBLO75128 1261 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 FARP2O94887 1054 aaPredicted RBP23.32■■□□□ 1.32
CMTM3-207ENST00000564060 PDHBP11177 359 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 PTH1RQ03431 593 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 CASC1Q6TDU7 716 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.32■■□□□ 1.32
CMTM3-207ENST00000564060 ZKSCAN3Q9BRR0 538 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 FLRT1Q9NZU1 646 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 ZSWIM5Q9P217 1185 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 PRR12Q9ULL5 1215 aa23.32■■□□□ 1.32
CMTM3-207ENST00000564060 SLC4A3P48751 1232 aa23.31■■□□□ 1.32
CMTM3-207ENST00000564060 TKFCQ3LXA3 575 aa23.31■■□□□ 1.32
CMTM3-207ENST00000564060 BTNL9Q6UXG8 535 aa23.31■■□□□ 1.32
CMTM3-207ENST00000564060 CHMP4CQ96CF2 233 aa23.31■■□□□ 1.32
CMTM3-207ENST00000564060 MAML3Q96JK9 1138 aa23.31■■□□□ 1.32
CMTM3-207ENST00000564060 KAT14Q9H8E8 782 aa23.31■■□□□ 1.32
CMTM3-207ENST00000564060 CYP21A2P08686 494 aa23.3■■□□□ 1.32
CMTM3-207ENST00000564060 GPATCH4Q5T3I0 446 aaKnown RBP23.3■■□□□ 1.32
CMTM3-207ENST00000564060 RALYLQ86SE5 291 aaKnown RBP23.3■■□□□ 1.32
CMTM3-207ENST00000564060 ANKS1AQ92625 1134 aa23.3■■□□□ 1.32
CMTM3-207ENST00000564060 MAP4K1Q92918 833 aa23.3■■□□□ 1.32
CMTM3-207ENST00000564060 DDX11Q96FC9 970 aa23.3■■□□□ 1.32
CMTM3-207ENST00000564060 HTATIP2Q9BUP3 242 aa23.3■■□□□ 1.32
CMTM3-207ENST00000564060 PNMA2Q9UL42 364 aa23.3■■□□□ 1.32
CMTM3-207ENST00000564060 RIPK3Q9Y572 518 aa23.3■■□□□ 1.32
CMTM3-207ENST00000564060 TNKSO95271 1327 aa23.3■■□□□ 1.32
CMTM3-207ENST00000564060 IGHA2P01877 340 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 SNHG28P0DPA3 235 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 CCND3P30281 292 aaPredicted RBP23.29■■□□□ 1.32
CMTM3-207ENST00000564060 CYP2C19P33261 490 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 ZNF543Q08ER8 600 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 SYDE2Q5VT97 1194 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 PNMA1Q8ND90 353 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 ESYT1Q9BSJ8 1104 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 ACAD9Q9H845 621 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 NRBP1Q9UHY1 535 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 OGDHLQ9ULD0 1010 aa23.29■■□□□ 1.32
CMTM3-207ENST00000564060 ZNF792Q3KQV3 632 aa23.28■■□□□ 1.32
CMTM3-207ENST00000564060 PRPF38BQ5VTL8 546 aaKnown RBP23.28■■□□□ 1.32
CMTM3-207ENST00000564060 RASGRP2Q7LDG7 609 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms