RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 BCRP11274 1271 aa26.15■■□□□ 1.78
SYNGR3-202ENST00000562045 IFIT1BQ5T764 474 aaKnown RBP26.15■■□□□ 1.78
SYNGR3-202ENST00000562045 SYNE3Q6ZMZ3 975 aa26.15■■□□□ 1.78
SYNGR3-202ENST00000562045 ANKRD13CQ8N6S4 541 aa26.15■■□□□ 1.78
SYNGR3-202ENST00000562045 SLC12A7Q9Y666 1083 aa26.15■■□□□ 1.78
SYNGR3-202ENST00000562045 SPDYE16A6NNV3 312 aaPredicted RBP26.14■■□□□ 1.78
SYNGR3-202ENST00000562045 FLOT1O75955 427 aa26.14■■□□□ 1.78
SYNGR3-202ENST00000562045 ECM2O94769 699 aaPredicted RBP26.14■■□□□ 1.78
SYNGR3-202ENST00000562045 DDIT3P35638 169 aa26.14■■□□□ 1.78
SYNGR3-202ENST00000562045 SCRN1Q12765 414 aa26.14■■□□□ 1.78
SYNGR3-202ENST00000562045 SAMD1Q6SPF0 538 aaPredicted RBP26.14■■□□□ 1.78
SYNGR3-202ENST00000562045 KCTD1Q719H9 257 aa26.14■■□□□ 1.77
SYNGR3-202ENST00000562045 PNMA1Q8ND90 353 aa26.14■■□□□ 1.77
SYNGR3-202ENST00000562045 GMCL1Q96IK5 515 aa26.14■■□□□ 1.77
SYNGR3-202ENST00000562045 RBPJLQ9UBG7 517 aa26.14■■□□□ 1.77
SYNGR3-202ENST00000562045 BMP3P12645 472 aa26.13■■□□□ 1.77
SYNGR3-202ENST00000562045 SLC1A4P43007 532 aa26.13■■□□□ 1.77
SYNGR3-202ENST00000562045 RCAN1P53805 252 aa26.13■■□□□ 1.77
SYNGR3-202ENST00000562045 KAT14Q9H8E8 782 aa26.13■■□□□ 1.77
SYNGR3-202ENST00000562045 CIZ1Q9ULV3 898 aaPredicted RBP26.13■■□□□ 1.77
SYNGR3-202ENST00000562045 SMC3Q9UQE7 1217 aa26.13■■□□□ 1.77
SYNGR3-202ENST00000562045 FRMPD2Q68DX3 1309 aaPredicted RBP26.12■■□□□ 1.77
SYNGR3-202ENST00000562045 ZBTB43O43298 467 aa26.12■■□□□ 1.77
SYNGR3-202ENST00000562045 DHX16O60231 1041 aaKnown RBP26.12■■□□□ 1.77
SYNGR3-202ENST00000562045 CNMDO75829 334 aa26.12■■□□□ 1.77
SYNGR3-202ENST00000562045 PDHBP11177 359 aa26.12■■□□□ 1.77
SYNGR3-202ENST00000562045 COG2Q14746 738 aa26.12■■□□□ 1.77
SYNGR3-202ENST00000562045 ATG4CQ96DT6 458 aa26.12■■□□□ 1.77
SYNGR3-202ENST00000562045 HPS5Q9UPZ3 1129 aa26.12■■□□□ 1.77
SYNGR3-202ENST00000562045 CTGFP29279 349 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 DSG3P32926 999 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 METAP2P50579 478 aaKnown RBP eCLIP26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 CCT2P78371 535 aaKnown RBP26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 LLPHQ9BRT6 129 aaKnown RBP26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 ARHGAP39Q9C0H5 1083 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 CHMP5Q9NZZ3 219 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 BTBD7Q9P203 1132 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 MGAMO43451 1857 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 SP3Q02447 781 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 Q3C1V9 767 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 NOM1Q5C9Z4 860 aaKnown RBP26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 TTBK2Q6IQ55 1244 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 MICU3Q86XE3 530 aa26.11■■□□□ 1.77
SYNGR3-202ENST00000562045 TMEM232C9JQI7 657 aa26.1■■□□□ 1.77
SYNGR3-202ENST00000562045 FKTNO75072 461 aa26.1■■□□□ 1.77
SYNGR3-202ENST00000562045 SNHG28P0DPA3 235 aa26.1■■□□□ 1.77
SYNGR3-202ENST00000562045 CATIPQ7Z7H3 387 aa26.1■■□□□ 1.77
SYNGR3-202ENST00000562045 ZNF654Q8IZM8 581 aa26.1■■□□□ 1.77
SYNGR3-202ENST00000562045 CD99L2Q8TCZ2 262 aa26.1■■□□□ 1.77
SYNGR3-202ENST00000562045 PAGR1Q9BTK6 254 aa26.1■■□□□ 1.77
SYNGR3-202ENST00000562045 ISY1Q9ULR0 285 aaKnown RBP26.1■■□□□ 1.77
SYNGR3-202ENST00000562045 GOLGA8HP0CJ92 632 aa26.09■■□□□ 1.77
SYNGR3-202ENST00000562045 CCDC96Q2M329 555 aa26.09■■□□□ 1.77
SYNGR3-202ENST00000562045 LBX2Q6XYB7 198 aa26.09■■□□□ 1.77
SYNGR3-202ENST00000562045 DCAF4Q8WV16 495 aa26.09■■□□□ 1.77
SYNGR3-202ENST00000562045 NCOA5Q9HCD5 579 aaKnown RBP26.09■■□□□ 1.77
SYNGR3-202ENST00000562045 PPP1R9AQ9ULJ8 1098 aa26.09■■□□□ 1.77
SYNGR3-202ENST00000562045 NID2Q14112 1375 aa26.09■■□□□ 1.77
SYNGR3-202ENST00000562045 GOLGA8AA7E2F4 631 aa26.08■■□□□ 1.77
SYNGR3-202ENST00000562045 GCLCP48506 637 aaPredicted RBP26.08■■□□□ 1.77
SYNGR3-202ENST00000562045 GPCPD1Q9NPB8 672 aa26.08■■□□□ 1.77
SYNGR3-202ENST00000562045 HOXC10Q9NYD6 342 aa26.08■■□□□ 1.77
SYNGR3-202ENST00000562045 ADAMTS5Q9UNA0 930 aa26.08■■□□□ 1.77
SYNGR3-202ENST00000562045 DDAH1O94760 285 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 CALM1P0DP23 149 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 CALM2P0DP24 149 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 CALM3P0DP25 149 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 RAB11FIP4Q86YS3 637 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 KIFC2Q96AC6 838 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 SLF1Q9BQI6 1058 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 CPVLQ9H3G5 476 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 MORF4L1Q9UBU8 362 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 HTTP42858 3142 aa26.08■■□□□ 1.76
SYNGR3-202ENST00000562045 CPLX1O14810 134 aa26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 GJB2P29033 226 aa26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 SLC16A2P36021 539 aa26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 LACTBP83111 547 aaPredicted RBP26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 ZNF543Q08ER8 600 aa26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 PPP2R5BQ15173 497 aa26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 FAM110CQ1W6H9 321 aa26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 MYL10Q9BUA6 226 aa26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 FEM1BQ9UK73 627 aa26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 DOCK3Q8IZD9 2030 aa26.07■■□□□ 1.76
SYNGR3-202ENST00000562045 RXRAP19793 462 aa26.06■■□□□ 1.76
SYNGR3-202ENST00000562045 CCDC196A0A1B0GTZ2 297 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 VWA5AO00534 786 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 STAT2P52630 851 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 SNAP25P60880 206 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 ERVK-9P63128 1117 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 ERVK-24P63145 666 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 HMGN5P82970 282 aaKnown RBP26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 TROAPQ12815 778 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 CPLX2Q6PUV4 134 aaKnown RBP26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 STAG2Q8N3U4 1231 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 NSUN7Q8NE18 718 aaKnown RBP26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 REPS2Q8NFH8 660 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 NUP133Q8WUM0 1156 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 MYPNQ86TC9 1320 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 CENPFP49454 3210 aa26.05■■□□□ 1.76
SYNGR3-202ENST00000562045 TMEM132BQ14DG7 1078 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms