RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 SNAPC2Q13487 334 aa18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 ORC3Q9UBD5 711 aaPredicted RBP18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 SMC3Q9UQE7 1217 aa18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 V9GY48 417 aaPredicted RBP18.91■□□□□ 0.62
TNFAIP2-205ENST00000559406 HSP90AA1P07900 732 aaKnown RBP18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 STAT2P52630 851 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 SYDE2Q5VT97 1194 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 POTEEQ6S8J3 1075 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 CATSPERGQ6ZRH7 1159 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 PROCA1Q8NCQ7 364 aaPredicted RBP18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 BRI3BPQ8WY22 251 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 MTMR8Q96EF0 704 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 PIGSQ96S52 555 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 ZIC5Q96T25 663 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 LZTS2Q9BRK4 669 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 RNF26Q9BY78 433 aaPredicted RBP18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 TANGO6Q9C0B7 1094 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 GJB4Q9NTQ9 266 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 PRR12Q9ULL5 1215 aa18.9■□□□□ 0.62
TNFAIP2-205ENST00000559406 PRPF3O43395 683 aaKnown RBP18.89■□□□□ 0.61
TNFAIP2-205ENST00000559406 HTRA3P83110 453 aa18.89■□□□□ 0.61
TNFAIP2-205ENST00000559406 SSRP1Q08945 709 aaKnown RBP18.89■□□□□ 0.61
TNFAIP2-205ENST00000559406 SAMD1Q6SPF0 538 aaPredicted RBP18.89■□□□□ 0.61
TNFAIP2-205ENST00000559406 FEM1BQ9UK73 627 aa18.89■□□□□ 0.61
TNFAIP2-205ENST00000559406 STK36Q9NRP7 1315 aa18.89■□□□□ 0.61
TNFAIP2-205ENST00000559406 A0A0G2JMZ2 1700 aa18.89■□□□□ 0.61
TNFAIP2-205ENST00000559406 PLA2G6O60733 806 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 PPP1R11O60927 126 aaPredicted RBP18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 TAL1P17542 331 aaPredicted RBP18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 SMARCA1P28370 1054 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 DDIT3P35638 169 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 IKQ13123 557 aaPredicted RBP18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 CYP4F22Q6NT55 531 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 CPLX2Q6PUV4 134 aaKnown RBP18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 HOMER1Q86YM7 354 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 KIFC2Q96AC6 838 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 PTPN18Q99952 460 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 CREBZFQ9NS37 354 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 CCL15-CCL14A0A0B4J2E2 113 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 FLOT1O75955 427 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 CDKL5O76039 1030 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 GTF2A2P52657 109 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 FOSBP53539 338 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 CCL15Q16663 113 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 HHIPL1Q96JK4 782 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 AGTPBP1Q9UPW5 1226 aa18.88■□□□□ 0.61
TNFAIP2-205ENST00000559406 ATG4CQ96DT6 458 aa18.87■□□□□ 0.61
TNFAIP2-205ENST00000559406 SLF1Q9BQI6 1058 aa18.87■□□□□ 0.61
TNFAIP2-205ENST00000559406 PPP1R9AQ9ULJ8 1098 aa18.87■□□□□ 0.61
TNFAIP2-205ENST00000559406 USP17L15C9J2P7 530 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 BTBD19C9JJ37 291 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 USP17L13C9JLJ4 530 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 USP17L11C9JVI0 530 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 USP17L18D6R9N7 530 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 USP17L22D6RA61 530 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 USP17L17D6RBQ6 530 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 USP17L19D6RCP7 530 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 USP17L20D6RJB6 530 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 HOXA7P31268 230 aaPredicted RBP18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 HMGN5P82970 282 aaKnown RBP18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 USP17L24Q0WX57 530 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 PKP1Q13835 747 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 CDC37Q16543 378 aaPredicted RBP18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 QRICH1Q2TAL8 776 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 TYW1BQ6NUM6 668 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 FASTKD5Q7L8L6 764 aaKnown RBP18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 FAM160B2Q86V87 743 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 FAM43AQ8N2R8 423 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 CHURC1Q8WUH1 139 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 GPKOWQ92917 476 aaPredicted RBP eCLIP18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 RASSF10A6NK89 507 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 PEX10O60683 326 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 DEXIO95424 95 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 CETPP11597 493 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 PFKFB3Q16875 520 aaPredicted RBP18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 OTUD7BQ6GQQ9 843 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 TRIM22Q8IYM9 498 aa18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 ASCC2Q9H1I8 757 aaPredicted RBP18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 RANBP17Q9H2T7 1088 aaKnown RBP18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 DAXXQ9UER7 740 aaPredicted RBP18.86■□□□□ 0.61
TNFAIP2-205ENST00000559406 TESPA1A2RU30 521 aaPredicted RBP18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 SPDYE16A6NNV3 312 aaPredicted RBP18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 DSG3P32926 999 aa18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 GRM1Q13255 1194 aa18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 WWC2Q6AWC2 1192 aa18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 PRPF38AQ8NAV1 312 aaKnown RBP18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 RRP36Q96EU6 259 aaKnown RBP18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 P2RX7Q99572 595 aaKnown RBP18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 ALG1Q9BT22 464 aa18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 ADAMTS5Q9UNA0 930 aa18.85■□□□□ 0.61
TNFAIP2-205ENST00000559406 ZNF536O15090 1300 aa18.84■□□□□ 0.61
TNFAIP2-205ENST00000559406 ZBTB5O15062 677 aa18.84■□□□□ 0.61
TNFAIP2-205ENST00000559406 ADAMTS3O15072 1205 aa18.84■□□□□ 0.61
TNFAIP2-205ENST00000559406 SCG2P13521 617 aa18.84■□□□□ 0.61
TNFAIP2-205ENST00000559406 COG2Q14746 738 aa18.84■□□□□ 0.61
TNFAIP2-205ENST00000559406 REPS2Q8NFH8 660 aa18.84■□□□□ 0.61
TNFAIP2-205ENST00000559406 CCDC102AQ96A19 550 aa18.84■□□□□ 0.61
TNFAIP2-205ENST00000559406 PNMA6FA0A0J9YX94 578 aa18.83■□□□□ 0.61
TNFAIP2-205ENST00000559406 IGF2BP3O00425 579 aaKnown RBP eCLIP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms