RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 JAKMIP3Q5VZ66 844 aa12□□□□□ -0.49
TPM1-210ENST00000558264 COA7Q96BR5 231 aa12□□□□□ -0.49
TPM1-210ENST00000558264 MASTLQ96GX5 879 aa12□□□□□ -0.49
TPM1-210ENST00000558264 TMX4Q9H1E5 349 aaPredicted RBP12□□□□□ -0.49
TPM1-210ENST00000558264 BIN2Q9UBW5 565 aaPredicted RBP12□□□□□ -0.49
TPM1-210ENST00000558264 COL11A2P13942 1736 aaPredicted RBP12□□□□□ -0.49
TPM1-210ENST00000558264 SMCO2A6NFE2 343 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 LRRC37AA6NMS7 1700 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 M0R2N6 131 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 PDHBP11177 359 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 SFPQP23246 707 aaKnown RBP eCLIP11.99□□□□□ -0.49
TPM1-210ENST00000558264 ALDH1B1P30837 517 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 DPYDQ12882 1025 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 KANK3Q6NY19 840 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 C4orf32Q8N8J7 132 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 MYRIPQ8NFW9 859 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 OSBPL5Q9H0X9 879 aaPredicted RBP11.99□□□□□ -0.49
TPM1-210ENST00000558264 PLSCR1O15162 318 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 SLC16A2P36021 539 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 E2F4Q16254 413 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 APOBEC3HQ6NTF7 200 aaKnown RBP11.99□□□□□ -0.49
TPM1-210ENST00000558264 TMC4Q7Z404 712 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 MLKLQ8NB16 471 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 CCDC148Q8NFR7 591 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 RRP36Q96EU6 259 aaKnown RBP11.99□□□□□ -0.49
TPM1-210ENST00000558264 SH3GLB2Q9NR46 395 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 MTMR4Q9NYA4 1195 aa11.99□□□□□ -0.49
TPM1-210ENST00000558264 SEC63Q9UGP8 760 aaKnown RBP11.99□□□□□ -0.49
TPM1-210ENST00000558264 CCNT1O60563 726 aaKnown RBP11.98□□□□□ -0.49
TPM1-210ENST00000558264 TRAPPC10P48553 1259 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 TERF1P54274 439 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 GSDMDP57764 484 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 TTBK2Q6IQ55 1244 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 SH3RF1Q7Z6J0 888 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 CERS3Q8IU89 383 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 CREBRFQ8IUR6 639 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 SPATA20Q8TB22 786 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 TEKT1Q969V4 418 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 SERPINB13Q9UIV8 391 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 CRKP46108 304 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 GABPAQ06546 454 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 PDXDC2PQ6P474 469 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 IQUBQ8NA54 791 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 UIMC1Q96RL1 719 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 SPZ1Q9BXG8 430 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 PDGFDQ9GZP0 370 aaPredicted RBP11.98□□□□□ -0.49
TPM1-210ENST00000558264 IMPACTQ9P2X3 320 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 CTNND2Q9UQB3 1225 aa11.98□□□□□ -0.49
TPM1-210ENST00000558264 SHMT1P34896 483 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 STAT6P42226 847 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 AOC3Q16853 763 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 DTHD1Q6ZMT9 781 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 KCTD1Q719H9 257 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 ZSCAN29Q8IWY8 852 aaPredicted RBP11.97□□□□□ -0.49
TPM1-210ENST00000558264 ELOA2Q8IYF1 753 aaPredicted RBP11.97□□□□□ -0.49
TPM1-210ENST00000558264 SYNRGQ9UMZ2 1314 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 NEMFO60524 1076 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 SOGA3Q5TF21 947 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 VSTM4Q8IW00 320 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 LRRC15Q8TF66 581 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 PRIMPOLQ96LW4 560 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 DACH1Q9UI36 760 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 UTRNP46939 3433 aa11.97□□□□□ -0.49
TPM1-210ENST00000558264 ECE2O60344 883 aa11.96□□□□□ -0.49
TPM1-210ENST00000558264 CCDC96Q2M329 555 aa11.96□□□□□ -0.49
TPM1-210ENST00000558264 E4F1Q66K89 784 aaPredicted RBP11.96□□□□□ -0.49
TPM1-210ENST00000558264 CCAR2Q8N163 923 aaKnown RBP11.96□□□□□ -0.49
TPM1-210ENST00000558264 TRIML1Q8N9V2 468 aa11.96□□□□□ -0.49
TPM1-210ENST00000558264 ENOX1Q8TC92 643 aaKnown RBP11.96□□□□□ -0.49
TPM1-210ENST00000558264 TBCKQ8TEA7 893 aa11.96□□□□□ -0.49
TPM1-210ENST00000558264 ZMYND12Q9H0C1 365 aa11.96□□□□□ -0.49
TPM1-210ENST00000558264 GDAQ9Y2T3 454 aa11.96□□□□□ -0.49
TPM1-210ENST00000558264 DDTLA6NHG4 134 aaPredicted RBP11.96□□□□□ -0.5
TPM1-210ENST00000558264 H0YIN7 160 aa11.96□□□□□ -0.5
TPM1-210ENST00000558264 CBFA2T2O43439 604 aa11.96□□□□□ -0.5
TPM1-210ENST00000558264 IGSF3O75054 1194 aa11.96□□□□□ -0.5
TPM1-210ENST00000558264 ZNF18P17022 549 aa11.96□□□□□ -0.5
TPM1-210ENST00000558264 ADKP55263 362 aaKnown RBP11.96□□□□□ -0.5
TPM1-210ENST00000558264 EN1Q05925 392 aaPredicted RBP11.96□□□□□ -0.5
TPM1-210ENST00000558264 DHX8Q14562 1220 aaKnown RBP11.96□□□□□ -0.5
TPM1-210ENST00000558264 EZH2Q15910 746 aaKnown RBP11.96□□□□□ -0.5
TPM1-210ENST00000558264 RRAGBQ5VZM2 374 aa11.96□□□□□ -0.5
TPM1-210ENST00000558264 ZNF772Q68DY9 489 aaPredicted RBP11.96□□□□□ -0.5
TPM1-210ENST00000558264 CCDC150Q8NCX0 1101 aa11.96□□□□□ -0.5
TPM1-210ENST00000558264 CCDC34Q96HJ3 373 aa11.96□□□□□ -0.5
TPM1-210ENST00000558264 LZTS2Q9BRK4 669 aa11.96□□□□□ -0.5
TPM1-210ENST00000558264 DNAJC18Q9H819 358 aa11.96□□□□□ -0.5
TPM1-210ENST00000558264 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
TPM1-210ENST00000558264 TEX33O43247 280 aa11.95□□□□□ -0.5
TPM1-210ENST00000558264 NPM3O75607 178 aaKnown RBP11.95□□□□□ -0.5
TPM1-210ENST00000558264 NONOQ15233 471 aaKnown RBP eCLIP11.95□□□□□ -0.5
TPM1-210ENST00000558264 UBE2SQ16763 222 aa11.95□□□□□ -0.5
TPM1-210ENST00000558264 CEP135Q66GS9 1140 aa11.95□□□□□ -0.5
TPM1-210ENST00000558264 C6orf50Q9HD87 102 aa11.95□□□□□ -0.5
TPM1-210ENST00000558264 TTLL1O95922 423 aa11.95□□□□□ -0.5
TPM1-210ENST00000558264 LONP1P36776 959 aaKnown RBP11.95□□□□□ -0.5
TPM1-210ENST00000558264 TXLNAP40222 546 aa11.95□□□□□ -0.5
TPM1-210ENST00000558264 UBA7P41226 1012 aa11.95□□□□□ -0.5
TPM1-210ENST00000558264 TECP42680 631 aa11.95□□□□□ -0.5
TPM1-210ENST00000558264 PTPN14Q15678 1187 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms