RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TTF2Q9UNY4 1162 aaKnown RBP13.92□□□□□ -0.18
HDAC7-230ENST00000552960 APBA3O96018 575 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 NAA15Q9BXJ9 866 aaKnown RBP13.92□□□□□ -0.18
HDAC7-230ENST00000552960 GBP3Q9H0R5 595 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 C4AP0C0L4 1744 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 DEXIO95424 95 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 UBXN1Q04323 297 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 KRT31Q15323 416 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 TTF1Q15361 905 aaPredicted RBP13.92□□□□□ -0.18
HDAC7-230ENST00000552960 EARS2Q5JPH6 523 aaKnown RBP13.92□□□□□ -0.18
HDAC7-230ENST00000552960 AKNAD1Q5T1N1 836 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 MSL1Q68DK7 614 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 GPIHBP1Q8IV16 184 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 RASSF8Q8NHQ8 419 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 DRC1Q96MC2 740 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 ACBD3Q9H3P7 528 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 PSD3Q9NYI0 1048 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 SLC4A4Q9Y6R1 1079 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 WDR19Q8NEZ3 1342 aa13.92□□□□□ -0.18
HDAC7-230ENST00000552960 RNF40O75150 1001 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 DPYDQ12882 1025 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 FKBP15Q5T1M5 1219 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 NT5DC1Q5TFE4 455 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 SGMS1Q86VZ5 419 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 GPATCH11Q8N954 259 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 ANKRD20A12PQ8NF67 263 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 SDR42E1Q8WUS8 393 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 HNRNPLLQ8WVV9 542 aaKnown RBP13.91□□□□□ -0.18
HDAC7-230ENST00000552960 FOXP1Q9H334 677 aaPredicted RBP13.91□□□□□ -0.18
HDAC7-230ENST00000552960 SERPINB2P05120 415 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 APTXQ7Z2E3 356 aaKnown RBP13.91□□□□□ -0.18
HDAC7-230ENST00000552960 TMTC1Q8IUR5 882 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 CRACR2BQ8N4Y2 399 aaPredicted RBP13.91□□□□□ -0.18
HDAC7-230ENST00000552960 ABHD10Q9NUJ1 306 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 RAB21Q9UL25 225 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 ZNF831Q5JPB2 1677 aa13.91□□□□□ -0.18
HDAC7-230ENST00000552960 EIF3CLB5ME19 914 aaKnown RBP13.9□□□□□ -0.18
HDAC7-230ENST00000552960 DYNLL1P63167 89 aaKnown RBP13.9□□□□□ -0.18
HDAC7-230ENST00000552960 MRPS25P82663 173 aaKnown RBP13.9□□□□□ -0.18
HDAC7-230ENST00000552960 TSR1Q2NL82 804 aaKnown RBP13.9□□□□□ -0.18
HDAC7-230ENST00000552960 FANCBQ8NB91 859 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 MSANTD4Q8NCY6 345 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 EIF3CQ99613 913 aaKnown RBP13.9□□□□□ -0.18
HDAC7-230ENST00000552960 V9GY48 417 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-230ENST00000552960 LAMB2P55268 1798 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 CASZ1Q86V15 1759 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 PATL2C9JE40 543 aaKnown RBP13.9□□□□□ -0.18
HDAC7-230ENST00000552960 WNT7AO00755 349 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 LIFRP42702 1097 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 UBE3CQ15386 1083 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 CYP26C1Q6V0L0 522 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 MTMR7Q9Y216 660 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 ZNF654Q8IZM8 581 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 FAM71BQ8TC56 605 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 PCMTD1Q96MG8 357 aaPredicted RBP13.9□□□□□ -0.18
HDAC7-230ENST00000552960 ANKIB1Q9P2G1 1089 aa13.9□□□□□ -0.18
HDAC7-230ENST00000552960 XBP1P17861 261 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 PRDX5P30044 214 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 MAP3K12Q12852 859 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 CUL4BQ13620 913 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 GRIK5Q16478 980 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 WHAMMP3Q1A5X7 153 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 CCDC122Q5T0U0 273 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 CTR9Q6PD62 1173 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 LRRC31Q6UY01 552 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 KIAA1328Q86T90 577 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 TICAM2Q86XR7 235 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 KRT23Q9C075 422 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
HDAC7-230ENST00000552960 MYH8P13535 1937 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 CYP2D7A0A087X1C5 515 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 CCDC196A0A1B0GTZ2 297 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 USP5P45974 858 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 E2F4Q16254 413 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 TTC31Q49AM3 519 aaPredicted RBP13.89□□□□□ -0.19
HDAC7-230ENST00000552960 PLIN2Q99541 437 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 CRACR2AQ9BSW2 395 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 EPN1Q9Y6I3 576 aaPredicted RBP13.89□□□□□ -0.19
HDAC7-230ENST00000552960 ZNF804BA4D1E1 1349 aa13.89□□□□□ -0.19
HDAC7-230ENST00000552960 GSG1L2A8MUP6 293 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 CYP7A1P22680 504 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 MATR3P43243 847 aaKnown RBP eCLIP13.88□□□□□ -0.19
HDAC7-230ENST00000552960 COPB1P53618 953 aaKnown RBP13.88□□□□□ -0.19
HDAC7-230ENST00000552960 DNAJC21Q5F1R6 531 aaKnown RBP13.88□□□□□ -0.19
HDAC7-230ENST00000552960 COL23A1Q86Y22 540 aaPredicted RBP13.88□□□□□ -0.19
HDAC7-230ENST00000552960 AFAP1L1Q8TED9 768 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 NACAP1Q9BZK3 213 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 MCM7P33993 719 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 UBE4AQ14139 1066 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 MMS19Q96T76 1030 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 CNNM2Q9H8M5 875 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 JADE2Q9NQC1 790 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 GNL3LQ9NVN8 582 aaKnown RBP13.88□□□□□ -0.19
HDAC7-230ENST00000552960 GDAQ9Y2T3 454 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 KCNJ18B7U540 433 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 ATP1A1P05023 1023 aaKnown RBP13.88□□□□□ -0.19
HDAC7-230ENST00000552960 PTGDRQ13258 359 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 KCNJ12Q14500 433 aa13.88□□□□□ -0.19
HDAC7-230ENST00000552960 TTC19Q6DKK2 380 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms