RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 CHMP2AO43633 222 aa8.8□□□□□ -1
LRP6-206ENST00000543091 FAM13AO94988 1023 aa8.8□□□□□ -1
LRP6-206ENST00000543091 TXKP42681 527 aa8.8□□□□□ -1
LRP6-206ENST00000543091 DNM1Q05193 864 aaKnown RBP8.8□□□□□ -1
LRP6-206ENST00000543091 MB21D2Q8IYB1 491 aaPredicted RBP8.8□□□□□ -1
LRP6-206ENST00000543091 FAM43AQ8N2R8 423 aa8.8□□□□□ -1
LRP6-206ENST00000543091 AP5M1Q9H0R1 490 aa8.8□□□□□ -1
LRP6-206ENST00000543091 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
LRP6-206ENST00000543091 USP54Q70EL1 1684 aa8.8□□□□□ -1
LRP6-206ENST00000543091 PKD1L3Q7Z443 1732 aa8.8□□□□□ -1
LRP6-206ENST00000543091 CCL15-CCL14A0A0B4J2E2 113 aa8.8□□□□□ -1
LRP6-206ENST00000543091 VWA3AA6NCI4 1184 aa8.8□□□□□ -1
LRP6-206ENST00000543091 NEMFO60524 1076 aa8.8□□□□□ -1
LRP6-206ENST00000543091 SERPINC1P01008 464 aa8.8□□□□□ -1
LRP6-206ENST00000543091 GTF2A2P52657 109 aa8.8□□□□□ -1
LRP6-206ENST00000543091 MTMR2Q13614 643 aa8.8□□□□□ -1
LRP6-206ENST00000543091 CCL15Q16663 113 aa8.8□□□□□ -1
LRP6-206ENST00000543091 USP37Q86T82 979 aa8.8□□□□□ -1
LRP6-206ENST00000543091 LDHDQ86WU2 507 aa8.8□□□□□ -1
LRP6-206ENST00000543091 IDI2Q9BXS1 227 aa8.8□□□□□ -1
LRP6-206ENST00000543091 PDCL3Q9H2J4 239 aa8.8□□□□□ -1
LRP6-206ENST00000543091 LRWD1Q9UFC0 647 aa8.8□□□□□ -1
LRP6-206ENST00000543091 XIRP1Q702N8 1843 aaKnown RBP8.79□□□□□ -1
LRP6-206ENST00000543091 KLRG2A4D1S0 409 aaPredicted RBP8.79□□□□□ -1
LRP6-206ENST00000543091 UBE2Q2LH0YL09 131 aa8.79□□□□□ -1
LRP6-206ENST00000543091 NFIAQ12857 509 aa8.79□□□□□ -1
LRP6-206ENST00000543091 TSGA10IPQ3SY00 556 aa8.79□□□□□ -1
LRP6-206ENST00000543091 SLFN12Q8IYM2 578 aa8.79□□□□□ -1
LRP6-206ENST00000543091 GLG1Q92896 1179 aa8.79□□□□□ -1
LRP6-206ENST00000543091 CCDC102AQ96A19 550 aa8.79□□□□□ -1
LRP6-206ENST00000543091 FERMT2Q96AC1 680 aa8.79□□□□□ -1
LRP6-206ENST00000543091 RPAP3Q9H6T3 665 aaPredicted RBP8.79□□□□□ -1
LRP6-206ENST00000543091 VCPKMTQ9H867 229 aa8.79□□□□□ -1
LRP6-206ENST00000543091 KCNG1Q9UIX4 513 aa8.79□□□□□ -1
LRP6-206ENST00000543091 COL18A1P39060 1754 aa8.79□□□□□ -1
LRP6-206ENST00000543091 ZBTB5O15062 677 aa8.79□□□□□ -1
LRP6-206ENST00000543091 CBFA2T2O43439 604 aa8.79□□□□□ -1
LRP6-206ENST00000543091 GCFC2P16383 781 aaKnown RBP8.79□□□□□ -1
LRP6-206ENST00000543091 ASIC1P78348 528 aa8.79□□□□□ -1
LRP6-206ENST00000543091 CETN1Q12798 172 aa8.79□□□□□ -1
LRP6-206ENST00000543091 TMTC3Q6ZXV5 915 aa8.79□□□□□ -1
LRP6-206ENST00000543091 PLA2G4DQ86XP0 818 aa8.79□□□□□ -1
LRP6-206ENST00000543091 NOSTRINQ8IVI9 506 aa8.79□□□□□ -1
LRP6-206ENST00000543091 RIOK1Q9BRS2 568 aaKnown RBP8.79□□□□□ -1
LRP6-206ENST00000543091 TRIM5Q9C035 493 aa8.79□□□□□ -1
LRP6-206ENST00000543091 ABCB11O95342 1321 aa8.79□□□□□ -1
LRP6-206ENST00000543091 DNM2P50570 870 aa8.79□□□□□ -1
LRP6-206ENST00000543091 SCRN1Q12765 414 aa8.79□□□□□ -1
LRP6-206ENST00000543091 GRM4Q14833 912 aa8.79□□□□□ -1
LRP6-206ENST00000543091 NCAPH2Q6IBW4 605 aa8.79□□□□□ -1
LRP6-206ENST00000543091 SNRNP48Q6IEG0 339 aaKnown RBP8.79□□□□□ -1
LRP6-206ENST00000543091 CHADLQ6NUI6 762 aa8.79□□□□□ -1
LRP6-206ENST00000543091 MB21D1Q8N884 522 aa8.79□□□□□ -1
LRP6-206ENST00000543091 CCDC150Q8NCX0 1101 aa8.79□□□□□ -1
LRP6-206ENST00000543091 ARHGEF35A5YM69 484 aa8.78□□□□□ -1
LRP6-206ENST00000543091 RASA1P20936 1047 aa8.78□□□□□ -1
LRP6-206ENST00000543091 CAP2P40123 477 aa8.78□□□□□ -1
LRP6-206ENST00000543091 STAT3P40763 770 aa8.78□□□□□ -1
LRP6-206ENST00000543091 ANAPC4Q9UJX5 808 aa8.78□□□□□ -1
LRP6-206ENST00000543091 MRVI1Q9Y6F6 885 aa8.78□□□□□ -1
LRP6-206ENST00000543091 RIC1Q4ADV7 1423 aa8.78□□□□□ -1
LRP6-206ENST00000543091 CRYBG1Q9Y4K1 1723 aa8.78□□□□□ -1
LRP6-206ENST00000543091 ZC3H4Q9UPT8 1303 aaKnown RBP8.78□□□□□ -1
LRP6-206ENST00000543091 CCND2P30279 289 aa8.78□□□□□ -1
LRP6-206ENST00000543091 KLHL10Q6JEL2 608 aa8.78□□□□□ -1
LRP6-206ENST00000543091 RNF207Q6ZRF8 634 aa8.78□□□□□ -1
LRP6-206ENST00000543091 MIER3Q7Z3K6 550 aa8.78□□□□□ -1
LRP6-206ENST00000543091 TMEM87AQ8NBN3 555 aa8.78□□□□□ -1
LRP6-206ENST00000543091 RNF214Q8ND24 703 aa8.78□□□□□ -1
LRP6-206ENST00000543091 FBXO18Q8NFZ0 1043 aa8.78□□□□□ -1
LRP6-206ENST00000543091 TCHPQ9BT92 498 aa8.78□□□□□ -1
LRP6-206ENST00000543091 RNF146Q9NTX7 359 aa8.78□□□□□ -1
LRP6-206ENST00000543091 ZNHIT6Q9NWK9 470 aaKnown RBP8.78□□□□□ -1
LRP6-206ENST00000543091 PCDHA4Q9UN74 947 aa8.78□□□□□ -1
LRP6-206ENST00000543091 LTBP3Q9NS15 1303 aa8.78□□□□□ -1
LRP6-206ENST00000543091 TRAPPC10P48553 1259 aa8.78□□□□□ -1
LRP6-206ENST00000543091 CAMK4Q16566 473 aa8.78□□□□□ -1
LRP6-206ENST00000543091 PRR16Q569H4 304 aa8.78□□□□□ -1
LRP6-206ENST00000543091 CT47A1Q5JQC4 288 aaPredicted RBP8.78□□□□□ -1
LRP6-206ENST00000543091 NBPF12Q5TAG4 269 aaPredicted RBP8.78□□□□□ -1
LRP6-206ENST00000543091 EPB41L4AQ9HCS5 686 aaPredicted RBP8.78□□□□□ -1
LRP6-206ENST00000543091 M0QZ92 97 aa8.78□□□□□ -1
LRP6-206ENST00000543091 DDX39AO00148 427 aaKnown RBP8.78□□□□□ -1
LRP6-206ENST00000543091 ZEB2O60315 1214 aa8.78□□□□□ -1
LRP6-206ENST00000543091 PPP1R18Q6NYC8 613 aa8.78□□□□□ -1
LRP6-206ENST00000543091 SV2BQ7L1I2 683 aa8.78□□□□□ -1
LRP6-206ENST00000543091 OTUD6AQ7L8S5 288 aa8.78□□□□□ -1
LRP6-206ENST00000543091 SGMS1Q86VZ5 419 aa8.78□□□□□ -1
LRP6-206ENST00000543091 AMIGO3Q86WK7 504 aa8.78□□□□□ -1
LRP6-206ENST00000543091 SNX29Q8TEQ0 813 aa8.78□□□□□ -1
LRP6-206ENST00000543091 DHX58Q96C10 678 aa8.78□□□□□ -1
LRP6-206ENST00000543091 IFT74Q96LB3 600 aa8.78□□□□□ -1
LRP6-206ENST00000543091 TEKT3Q9BXF9 490 aa8.78□□□□□ -1
LRP6-206ENST00000543091 GLIS2Q9BZE0 524 aaPredicted RBP8.78□□□□□ -1
LRP6-206ENST00000543091 ACAD9Q9H845 621 aa8.78□□□□□ -1
LRP6-206ENST00000543091 GAKO14976 1311 aa8.77□□□□□ -1
LRP6-206ENST00000543091 TNPO2O14787 897 aaKnown RBP8.77□□□□□ -1
LRP6-206ENST00000543091 CUTAO60888 179 aa8.77□□□□□ -1
LRP6-206ENST00000543091 AP3B2Q13367 1082 aa8.77□□□□□ -1
LRP6-206ENST00000543091 INF2Q27J81 1249 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms