RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 FAM205CA6NFA0 338 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 SPTLC2O15270 562 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 TPD52L1Q16890 204 aaPredicted RBP17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 HOMER1Q86YM7 354 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 TMEM39BQ9GZU3 492 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 CABP5Q9NP86 173 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 CNTNAP1P78357 1384 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 ADAMTS3O15072 1205 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 KRT2P35908 639 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 SYCP1Q15431 976 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 EARS2Q5JPH6 523 aaKnown RBP17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 TATDN1Q6P1N9 297 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 CCAR1Q8IX12 1150 aaKnown RBP17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 CCDC17Q96LX7 622 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 OGFRQ9NZT2 677 aa17.46■□□□□ 0.39
CLPTM1-202ENST00000541297 YEATS4O95619 227 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 TOB1P50616 345 aaPredicted RBP17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 NLRP5P59047 1200 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 NOM1Q5C9Z4 860 aaKnown RBP17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 FHDC1Q9C0D6 1143 aaPredicted RBP17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 GOLPH3LQ9H4A5 285 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 MYO1BO43795 1136 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 RRP1BQ14684 758 aaKnown RBP17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 SEPT2Q15019 361 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 NPY5RQ15761 445 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 HEATR3Q7Z4Q2 680 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 CCDC112Q8NEF3 446 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 KCNG4Q8TDN1 519 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 GPCPD1Q9NPB8 672 aa17.45■□□□□ 0.38
CLPTM1-202ENST00000541297 JAG1P78504 1218 aa17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 FAM151AQ8WW52 585 aa17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 PAXBP1Q9Y5B6 917 aa17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 EEF2P13639 858 aaKnown RBP17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 GMPSP49915 693 aaPredicted RBP17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 ABCB5Q2M3G0 1257 aa17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 TYW1BQ6NUM6 668 aa17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 MTMR14Q8NCE2 650 aa17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 ZNF592Q92610 1267 aa17.44■□□□□ 0.38
CLPTM1-202ENST00000541297 SLC39A14Q15043 492 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 WWC2Q6AWC2 1192 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 ARHGAP27Q6ZUM4 889 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 MIGA2Q7L4E1 593 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 SAMD7Q7Z3H4 446 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 BRMS1Q9HCU9 246 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 GH2P01242 217 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 FSIP1Q8NA03 581 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 LZTS2Q9BRK4 669 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 PCDHB6Q9Y5E3 794 aa17.43■□□□□ 0.38
CLPTM1-202ENST00000541297 A0A1B0GVL5 298 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 ICA1Q05084 483 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 ARID5BQ14865 1188 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 PTPAQ15257 358 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 ADALQ6DHV7 355 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 KCTD1Q719H9 257 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 METTL16Q86W50 562 aaKnown RBP17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 MICALL2Q8IY33 904 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 PIGSQ96S52 555 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 SPZ1Q9BXG8 430 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 ZNF541Q9H0D2 1346 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 COL2A1P02458 1487 aaPredicted RBP17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 FZD9O00144 591 aa17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 ZBED3Q96IU2 234 aaPredicted RBP17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 CGNQ9P2M7 1197 aaKnown RBP17.42■□□□□ 0.38
CLPTM1-202ENST00000541297 CCDC96Q2M329 555 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 TBC1D10BQ4KMP7 808 aaPredicted RBP17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 RILPL1Q5EBL4 403 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 CEP135Q66GS9 1140 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 TTBK2Q6IQ55 1244 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 TMEM179Q6ZVK1 233 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 KANSL2Q9H9L4 492 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 ASTN2O75129 1339 aaPredicted RBP17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 USP27XA6NNY8 438 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 SNHG28P0DPA3 235 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 SLC16A2P36021 539 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 ASPRV1Q53RT3 343 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 CCDC73Q6ZRK6 1079 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 SIAH1Q8IUQ4 282 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 LRRC8AQ8IWT6 810 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 RASGRP4Q8TDF6 673 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 RRP36Q96EU6 259 aaKnown RBP17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 CNOT7Q9UIV1 285 aaKnown RBP17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 PIK3AP1Q6ZUJ8 805 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 CLIC6Q96NY7 704 aa17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 SEC63Q9UGP8 760 aaKnown RBP17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 HERC5Q9UII4 1024 aaKnown RBP17.41■□□□□ 0.38
CLPTM1-202ENST00000541297 STXBP3O00186 592 aa17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 WNT7AO00755 349 aa17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 ZNF543Q08ER8 600 aa17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 SNW1Q13573 536 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 IQCB1Q15051 598 aa17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 C11orf57Q6ZUT1 292 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 MRPS27Q92552 414 aaKnown RBP17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 TNFRSF25Q93038 417 aa17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 BARHL2Q9NY43 387 aa17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.4■□□□□ 0.38
CLPTM1-202ENST00000541297 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms