RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 MAGEA9P43362 315 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 AMPD3Q01432 767 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 ACSBG1Q96GR2 724 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 TSG101Q99816 390 aa14.47□□□□□ -0.09
MSH6-210ENST00000540021 BMP2KQ9NSY1 1161 aaPredicted RBP14.47□□□□□ -0.09
MSH6-210ENST00000540021 SMIM23A6NLE4 172 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 PPFIA4O75335 1185 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 MUM1L1Q5H9M0 696 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 MICALCLQ6ZW33 695 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 CCDC24Q8N4L8 307 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 CRNKL1Q9BZJ0 848 aaKnown RBP14.46□□□□□ -0.09
MSH6-210ENST00000540021 SLC39A2Q9NP94 309 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 ATG3Q9NT62 314 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 RBM28Q9NW13 759 aaKnown RBP14.46□□□□□ -0.09
MSH6-210ENST00000540021 TXKP42681 527 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 ERVK-24P63145 666 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 RASGRP2Q7LDG7 609 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 KRT26Q7Z3Y9 468 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 RNF26Q9BY78 433 aaPredicted RBP14.46□□□□□ -0.09
MSH6-210ENST00000540021 PPANQ9NQ55 473 aaKnown RBP14.46□□□□□ -0.09
MSH6-210ENST00000540021 TBC1D7Q9P0N9 293 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 L1RE1Q9UN81 338 aa14.46□□□□□ -0.09
MSH6-210ENST00000540021 NMT2O60551 498 aa14.46□□□□□ -0.1
MSH6-210ENST00000540021 CCNT1O60563 726 aaKnown RBP14.46□□□□□ -0.1
MSH6-210ENST00000540021 MOCS3O95396 460 aa14.46□□□□□ -0.1
MSH6-210ENST00000540021 TSPY3P0CV98 308 aa14.46□□□□□ -0.1
MSH6-210ENST00000540021 TSPY8P0CW00 308 aa14.46□□□□□ -0.1
MSH6-210ENST00000540021 HSD3B7Q9H2F3 369 aa14.46□□□□□ -0.1
MSH6-210ENST00000540021 DIP2AQ14689 1571 aa14.46□□□□□ -0.1
MSH6-210ENST00000540021 DIP2BQ9P265 1576 aa14.46□□□□□ -0.1
MSH6-210ENST00000540021 C3P01024 1663 aa14.46□□□□□ -0.1
MSH6-210ENST00000540021 BICDL2A1A5D9 508 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 DNM2P50570 870 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 PPFIA1Q13136 1202 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 PDCLQ13371 301 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 ICE2Q659A1 982 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.45□□□□□ -0.1
MSH6-210ENST00000540021 CEP89Q96ST8 783 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 KCND1Q9NSA2 647 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 SMARCAL1Q9NZC9 954 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 GOLGA8HP0CJ92 632 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 RAPGEF1Q13905 1077 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 SGMS1Q86VZ5 419 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 SCLT1Q96NL6 688 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 NHEJ1Q9H9Q4 299 aaPredicted RBP14.45□□□□□ -0.1
MSH6-210ENST00000540021 EPB41L4AQ9HCS5 686 aaPredicted RBP14.45□□□□□ -0.1
MSH6-210ENST00000540021 MYO1AQ9UBC5 1043 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 GSG1L2A8MUP6 293 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 CNOT6LQ96LI5 555 aaKnown RBP14.45□□□□□ -0.1
MSH6-210ENST00000540021 TFCP2L1Q9NZI6 479 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 RWDD2AQ9UIY3 292 aa14.45□□□□□ -0.1
MSH6-210ENST00000540021 FANCGO15287 622 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 SCG2P13521 617 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 ZNF658Q5TYW1 1059 aaPredicted RBP14.44□□□□□ -0.1
MSH6-210ENST00000540021 NLRP10Q86W26 655 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 CCDC114Q96M63 670 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 SPAG5Q96R06 1193 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 TRIM31Q9BZY9 425 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 ZNF18P17022 549 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 IKQ13123 557 aaPredicted RBP14.44□□□□□ -0.1
MSH6-210ENST00000540021 GIGYF2Q6Y7W6 1299 aaKnown RBP14.44□□□□□ -0.1
MSH6-210ENST00000540021 TMEM139Q8IV31 216 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 MB21D1Q8N884 522 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 ZBTB1Q9Y2K1 713 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 ESYT3A0FGR9 886 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 USP14P54578 494 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 CASP7P55210 303 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 RASSF7Q02833 373 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 GUCY2DQ02846 1103 aa14.44□□□□□ -0.1
MSH6-210ENST00000540021 TBX2Q13207 712 aaPredicted RBP14.44□□□□□ -0.1
MSH6-210ENST00000540021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.44□□□□□ -0.15e-7■■■□□ 15
MSH6-210ENST00000540021 TLDC2A0PJX2 215 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 TRAF5O00463 557 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 NTRK3Q16288 839 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
MSH6-210ENST00000540021 MLXIPQ9HAP2 919 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 E7EVH7 732 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 FGFR1OPO95684 399 aaKnown RBP14.43□□□□□ -0.1
MSH6-210ENST00000540021 TECP42680 631 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 TMEM266Q2M3C6 531 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 CABP7Q86V35 215 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 BLIDQ8IZY5 108 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 UBLCP1Q8WVY7 318 aaPredicted RBP14.43□□□□□ -0.1
MSH6-210ENST00000540021 CCDC43Q96MW1 224 aaKnown RBP14.43□□□□□ -0.1
MSH6-210ENST00000540021 EFCC1Q9HA90 598 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 AGPAT5Q9NUQ2 364 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 CT47A1Q5JQC4 288 aaPredicted RBP14.43□□□□□ -0.1
MSH6-210ENST00000540021 TRIM58Q8NG06 486 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 TSGA10Q9BZW7 698 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 DUSP10Q9Y6W6 482 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 MON2Q7Z3U7 1717 aa14.43□□□□□ -0.1
MSH6-210ENST00000540021 NCK2O43639 380 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 ARID4AP29374 1257 aaPredicted RBP14.42□□□□□ -0.1
MSH6-210ENST00000540021 TFAP4Q01664 338 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 GBP6Q6ZN66 633 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 TADA2BQ86TJ2 420 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 EFCAB13Q8IY85 973 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 RPGRIP1Q96KN7 1286 aa14.42□□□□□ -0.1
MSH6-210ENST00000540021 SAP30BPQ9UHR5 308 aaKnown RBP14.42□□□□□ -0.1
MSH6-210ENST00000540021 FBXO3Q9UK99 471 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms