RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 CYP4F8P98187 520 aa3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 LAPTM5Q13571 262 aa3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 SPRED1Q7Z699 444 aa3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 NUP43Q8NFH3 380 aa3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 SYTL5Q8TDW5 730 aaPredicted RBP3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 JARID2Q92833 1246 aaPredicted RBP3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 TCTN2Q96GX1 697 aa3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 MIR1-1HGQ9H1L0 117 aa3.84□□□□□ -1.79
CBX3P4-201ENST00000538909 WTIPA6NIX2 430 aaPredicted RBP3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 FADS2P1A8MWK0 482 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 TREHO43280 583 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 NOBOXO60393 691 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 CHMP4BP1P59074 171 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 RPS26P62854 115 aaKnown RBP3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 FOXO4P98177 505 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 CAP1Q01518 475 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 CCDC85BQ15834 202 aaPredicted RBP3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 TSNAXIP1Q2TAA8 658 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 BBS9Q3SYG4 887 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 ZC3H14Q6PJT7 736 aaKnown RBP3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 TMC3Q7Z5M5 1100 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 SH3RF3Q8TEJ3 882 aaPredicted RBP3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 RBM15Q96T37 977 aaKnown RBP eCLIP3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 LNPKQ9C0E8 428 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 C12orf49Q9H741 205 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 TNFRSF12AQ9NP84 129 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 FAM8A1Q9UBU6 413 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 KLHL3Q9UH77 587 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 WWC3Q9ULE0 1092 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 PLA2G2DQ9UNK4 145 aa3.83□□□□□ -1.8
CBX3P4-201ENST00000538909 IRS2Q9Y4H2 1338 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 CYR61O00622 381 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 GIPC1O14908 333 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 TGM1P22735 817 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 FBLN1P23142 703 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 RPL6Q02878 288 aaKnown RBP3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 CBX2Q14781 532 aaPredicted RBP3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 CCDC82Q8N4S0 544 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 DAGLBQ8NCG7 672 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 CHST13Q8NET6 341 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 ENOX1Q8TC92 643 aaKnown RBP3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 FBF1Q8TES7 1133 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 TNFRSF10DQ9UBN6 386 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 BIN2Q9UBW5 565 aaPredicted RBP3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 DCTN4Q9UJW0 460 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 SPG7Q9UQ90 795 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 FAN1Q9Y2M0 1017 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 HCFC2Q9Y5Z7 792 aa3.82□□□□□ -1.8
CBX3P4-201ENST00000538909 CHURC1-FNTBB4DL54 471 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 ATF2P15336 505 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 MAPK1P28482 360 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 ACVRL1P37023 503 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 MAPKAPK2P49137 400 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 LIG3P49916 1009 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 TARBP2Q15633 366 aaKnown RBP3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 AGMOQ6ZNB7 445 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 SAPCD2Q86UD0 394 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 TXNDC2Q86VQ3 553 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 PHACTR4Q8IZ21 702 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 ZNF655Q8N720 491 aaPredicted RBP3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 LINC00116Q8NCU8 138 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 FCRL2Q96LA5 508 aaPredicted RBP3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 CCDC74BQ96LY2 380 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 SAMD11Q96NU1 681 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 KIF2CQ99661 725 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 C1QTNF3Q9BXJ4 246 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 IMPACTQ9P2X3 320 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 ST6GALNAC2Q9UJ37 374 aa3.81□□□□□ -1.8
CBX3P4-201ENST00000538909 TFE3P19532 575 aaPredicted RBP3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 GBP1P32455 592 aa3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 SNW1Q13573 536 aaKnown RBP3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 USP51Q70EK9 711 aa3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 SLCO6A1Q86UG4 719 aa3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 SLFN12Q8IYM2 578 aa3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 CARFQ8N187 725 aa3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 DVL3Q92997 716 aaPredicted RBP3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 CDADC1Q9BWV3 514 aa3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 WDR26Q9H7D7 661 aa3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 MINPP1Q9UNW1 487 aa3.8□□□□□ -1.8
CBX3P4-201ENST00000538909 SH3D21A4FU49 640 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 MEIS1O00470 390 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 PRAMEF1O95521 474 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 MC3RP41968 323 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 HTRA3P83110 453 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 DLX2Q07687 328 aaPredicted RBP3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 NR1I3Q14994 352 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 ALG1LQ6GMV1 187 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 CRIP3Q6Q6R5 217 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 TTC9BQ8N6N2 239 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 JMJD8Q96S16 334 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 VPS11Q9H270 941 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 ERVK13-1Q9NX77 482 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 REV1Q9UBZ9 1251 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 ACSL6Q9UKU0 697 aa3.79□□□□□ -1.8
CBX3P4-201ENST00000538909 CCDC180Q9P1Z9 1646 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 A0A1W2PQ27 194 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 A0A1W2PQ64 194 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 A0A1W2PQC6 194 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 A0A1W2PQD8 194 aa3.78□□□□□ -1.8
CBX3P4-201ENST00000538909 FZD7O75084 574 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms