RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 KLRC3Q07444 240 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 ACVR2BQ13705 512 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 TJAP1Q5JTD0 557 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 GNASQ5JWF2 1037 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 C16orf86Q6ZW13 317 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 ANKRD33Q7Z3H0 272 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 KLHDC9Q8NEP7 349 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.65■□□□□ 0.1
COPB1-209ENST00000533096 KIFC2Q96AC6 838 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 SLF1Q9BQI6 1058 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 PRDM12Q9H4Q4 367 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 RAVER2Q9HCJ3 691 aaKnown RBP15.65■□□□□ 0.1
COPB1-209ENST00000533096 CLIP2Q9UDT6 1046 aa15.65■□□□□ 0.1
COPB1-209ENST00000533096 TMEM265A0A087WTH1 108 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 ASGR1P07306 291 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 CSF2RAP15509 400 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 COPB2P35606 906 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 MFSD5Q6N075 450 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 ZNF365Q70YC5 407 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 ANKRD35Q8N283 1001 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 REPS2Q8NFH8 660 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 GAS2L1Q99501 681 aaPredicted RBP15.64■□□□□ 0.09
COPB1-209ENST00000533096 TEX13BQ9BXU2 312 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 SPC25Q9HBM1 224 aa15.64■□□□□ 0.09
COPB1-209ENST00000533096 ISY1Q9ULR0 285 aaKnown RBP15.64■□□□□ 0.09
COPB1-209ENST00000533096 CUL9Q8IWT3 2517 aa15.63■□□□□ 0.09
COPB1-209ENST00000533096 MOXD2PA6NHM9 499 aa15.63■□□□□ 0.09
COPB1-209ENST00000533096 TNFRSF10AO00220 468 aa15.63■□□□□ 0.09
COPB1-209ENST00000533096 DUSP11O75319 330 aaKnown RBP15.63■□□□□ 0.09
COPB1-209ENST00000533096 ATP5JP18859 108 aa15.63■□□□□ 0.09
COPB1-209ENST00000533096 COL9A1P20849 921 aa15.63■□□□□ 0.09
COPB1-209ENST00000533096 PPIGQ13427 754 aaKnown RBP eCLIP15.63■□□□□ 0.093e-7■□□□□ 8.2
COPB1-209ENST00000533096 CCDC144BQ3MJ40 725 aa15.63■□□□□ 0.09
COPB1-209ENST00000533096 TMEM240Q5SV17 173 aa15.63■□□□□ 0.09
COPB1-209ENST00000533096 TMEM199Q8N511 208 aa15.63■□□□□ 0.09
COPB1-209ENST00000533096 PRPF38AQ8NAV1 312 aaKnown RBP15.63■□□□□ 0.09
COPB1-209ENST00000533096 PCSK9Q8NBP7 692 aaKnown RBP15.63■□□□□ 0.09
COPB1-209ENST00000533096 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.63■□□□□ 0.09
COPB1-209ENST00000533096 PBX4Q9BYU1 374 aa15.63■□□□□ 0.09
COPB1-209ENST00000533096 PUS7LQ9H0K6 701 aaKnown RBP15.63■□□□□ 0.09
COPB1-209ENST00000533096 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.63■□□□□ 0.09
COPB1-209ENST00000533096 HMMRO75330 724 aa15.62■□□□□ 0.09
COPB1-209ENST00000533096 CYP2C18P33260 490 aa15.62■□□□□ 0.09
COPB1-209ENST00000533096 CDK7P50613 346 aa15.62■□□□□ 0.09
COPB1-209ENST00000533096 CCSAPQ6IQ19 270 aaPredicted RBP15.62■□□□□ 0.09
COPB1-209ENST00000533096 CCDC174Q6PII3 467 aa15.62■□□□□ 0.09
COPB1-209ENST00000533096 RPAP2Q8IXW5 612 aaPredicted RBP15.62■□□□□ 0.09
COPB1-209ENST00000533096 HAUS7Q99871 368 aa15.62■□□□□ 0.09
COPB1-209ENST00000533096 HOMER2Q9NSB8 354 aa15.62■□□□□ 0.09
COPB1-209ENST00000533096 RAPGEFL1Q9UHV5 662 aa15.62■□□□□ 0.09
COPB1-209ENST00000533096 TBX21Q9UL17 535 aa15.62■□□□□ 0.09
COPB1-209ENST00000533096 MAST2Q6P0Q8 1798 aa15.62■□□□□ 0.09
COPB1-209ENST00000533096 ARVCFO00192 962 aa15.61■□□□□ 0.09
COPB1-209ENST00000533096 RAB11FIP3O75154 756 aa15.61■□□□□ 0.09
COPB1-209ENST00000533096 NDUFB10O96000 172 aa15.61■□□□□ 0.09
COPB1-209ENST00000533096 BEX3Q00994 111 aa15.61■□□□□ 0.09
COPB1-209ENST00000533096 UBE3CQ15386 1083 aa15.61■□□□□ 0.09
COPB1-209ENST00000533096 SIRT2Q8IXJ6 389 aa15.61■□□□□ 0.09
COPB1-209ENST00000533096 ZNF444Q8N0Y2 327 aaPredicted RBP15.61■□□□□ 0.09
COPB1-209ENST00000533096 MSL3Q8N5Y2 521 aaKnown RBP15.61■□□□□ 0.09
COPB1-209ENST00000533096 MSRAQ9UJ68 235 aa15.61■□□□□ 0.09
COPB1-209ENST00000533096 COG6Q9Y2V7 657 aa15.61■□□□□ 0.09
COPB1-209ENST00000533096 ELP1O95163 1332 aa15.61■□□□□ 0.09
COPB1-209ENST00000533096 MYH1P12882 1939 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 DNAJC25-GNG10A0A024R161 153 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 TLR3O15455 904 aaKnown RBP15.6■□□□□ 0.09
COPB1-209ENST00000533096 ADCY6O43306 1168 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 SMARCA5O60264 1052 aaPredicted RBP15.6■□□□□ 0.09
COPB1-209ENST00000533096 PRDM1O75626 825 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 FGBP02675 491 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 APPP05067 770 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 RASA1P20936 1047 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 ZSCAN25Q6NSZ9 544 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 MAMDC4Q6UXC1 1216 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 ABHD16BQ9H3Z7 469 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 SYNGAP1Q96PV0 1343 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 UNC80Q8N2C7 3258 aa15.6■□□□□ 0.09
COPB1-209ENST00000533096 MYO5AQ9Y4I1 1855 aaKnown RBP15.59■□□□□ 0.09
COPB1-209ENST00000533096 A0A0U1RQG5 324 aaPredicted RBP15.59■□□□□ 0.09
COPB1-209ENST00000533096 CXCL17Q6UXB2 119 aa15.59■□□□□ 0.09
COPB1-209ENST00000533096 ARMCX2Q7L311 632 aa15.59■□□□□ 0.09
COPB1-209ENST00000533096 OTOP2Q7RTS6 562 aa15.59■□□□□ 0.09
COPB1-209ENST00000533096 CCDC144CPQ8IYA2 1237 aa15.59■□□□□ 0.09
COPB1-209ENST00000533096 MICALL1Q8N3F8 863 aa15.59■□□□□ 0.09
COPB1-209ENST00000533096 ASB2Q96Q27 587 aa15.59■□□□□ 0.09
COPB1-209ENST00000533096 STRBPQ96SI9 672 aaKnown RBP15.59■□□□□ 0.09
COPB1-209ENST00000533096 NKX2-4Q9H2Z4 354 aa15.59■□□□□ 0.09
COPB1-209ENST00000533096 NYAP2Q9P242 653 aa15.59■□□□□ 0.09
COPB1-209ENST00000533096 MROH7Q68CQ1 1323 aa15.59■□□□□ 0.09
COPB1-209ENST00000533096 DNAH12Q6ZR08 3092 aa15.58■□□□□ 0.08
COPB1-209ENST00000533096 DYNC1LI2O43237 492 aaPredicted RBP15.58■□□□□ 0.08
COPB1-209ENST00000533096 CCL23P55773 120 aa15.58■□□□□ 0.08
COPB1-209ENST00000533096 GJA9P57773 515 aa15.58■□□□□ 0.08
COPB1-209ENST00000533096 CNTN2Q02246 1040 aa15.58■□□□□ 0.08
COPB1-209ENST00000533096 TNFAIP2Q03169 654 aa15.58■□□□□ 0.08
COPB1-209ENST00000533096 ADGRE1Q14246 886 aa15.58■□□□□ 0.08
COPB1-209ENST00000533096 IL27Q8NEV9 243 aa15.58■□□□□ 0.08
COPB1-209ENST00000533096 ATXN2LQ8WWM7 1075 aaKnown RBP15.58■□□□□ 0.08
COPB1-209ENST00000533096 SLC28A3Q9HAS3 691 aa15.58■□□□□ 0.08
COPB1-209ENST00000533096 CXXC1Q9P0U4 656 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms