RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 CDC42EP5Q6NZY7 148 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 SLC4A9Q96Q91 983 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 CTAGE1Q96RT6 745 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 LRSAM1Q6UWE0 723 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 C3orf67Q6ZVT6 689 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 DGKHQ86XP1 1220 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 TMCO5BA8MYB1 307 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 AKR1B1P15121 316 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 PTGS1P23219 599 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 CNNM4Q6P4Q7 775 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 RGS22Q8NE09 1264 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 FAM200AQ8TCP9 573 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 STAG1Q8WVM7 1258 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 STK24Q9Y6E0 443 aa17.6■□□□□ 0.41
PPFIA1-222ENST00000532504 ANKRD62A6NC57 917 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 NECTIN1Q15223 517 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 GALNT17Q6IS24 598 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 DEPTORQ8TB45 409 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 ZNF202O95125 648 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 ZNF157P51786 506 aaPredicted RBP17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 LRCH2Q5VUJ6 765 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 USP28Q96RU2 1077 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 SLF1Q9BQI6 1058 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 ZNF577Q9BSK1 485 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 RPAP1Q9BWH6 1393 aaPredicted RBP17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 HOXC10Q9NYD6 342 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 CCDC172P0C7W6 258 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 UBXN1Q04323 297 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 DDR1Q08345 913 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 FBXO33Q7Z6M2 555 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 TTC14Q96N46 770 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 MAP7D2Q96T17 732 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 FHDC1Q9C0D6 1143 aaPredicted RBP17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 TMEM39BQ9GZU3 492 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 EXOC7Q9UPT5 735 aa17.59■□□□□ 0.41
PPFIA1-222ENST00000532504 PTGDRQ13258 359 aa17.58■□□□□ 0.41
PPFIA1-222ENST00000532504 GPBP1Q86WP2 473 aa17.58■□□□□ 0.41
PPFIA1-222ENST00000532504 SLFN12Q8IYM2 578 aa17.58■□□□□ 0.41
PPFIA1-222ENST00000532504 EPB41P11171 864 aaKnown RBP17.58■□□□□ 0.41
PPFIA1-222ENST00000532504 SNRNP48Q6IEG0 339 aaKnown RBP17.58■□□□□ 0.41
PPFIA1-222ENST00000532504 FBXO18Q8NFZ0 1043 aa17.58■□□□□ 0.41
PPFIA1-222ENST00000532504 ERCC4Q92889 916 aaPredicted RBP17.58■□□□□ 0.41
PPFIA1-222ENST00000532504 NBPF3Q9H094 633 aa17.58■□□□□ 0.41
PPFIA1-222ENST00000532504 PCDHA4Q9UN74 947 aa17.58■□□□□ 0.41
PPFIA1-222ENST00000532504 ZSCAN12O43309 604 aa17.58■□□□□ 0.4
PPFIA1-222ENST00000532504 CTNNA2P26232 953 aa17.58■□□□□ 0.4
PPFIA1-222ENST00000532504 RAPGEF1Q13905 1077 aa17.58■□□□□ 0.4
PPFIA1-222ENST00000532504 TBCKQ8TEA7 893 aa17.58■□□□□ 0.4
PPFIA1-222ENST00000532504 AIFM3Q96NN9 605 aa17.58■□□□□ 0.4
PPFIA1-222ENST00000532504 NT5C3AQ9H0P0 336 aa17.58■□□□□ 0.4
PPFIA1-222ENST00000532504 PRPF4BQ13523 1007 aaKnown RBP17.58■□□□□ 0.4
PPFIA1-222ENST00000532504 RDH13Q8NBN7 331 aa17.58■□□□□ 0.4
PPFIA1-222ENST00000532504 OSBPL5Q9H0X9 879 aaPredicted RBP17.58■□□□□ 0.4
PPFIA1-222ENST00000532504 F5H6K3 240 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 KLRC3Q07444 240 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 SLC10A5Q5PT55 438 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 CYB5R4Q7L1T6 521 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 SIGLEC1Q9BZZ2 1709 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 MAP2P11137 1827 aaKnown RBP17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 KIF5CO60282 957 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 RFX5P48382 616 aaPredicted RBP17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 NR5A1Q13285 461 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 HSP90AA2PQ14568 343 aaPredicted RBP17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 DEFB129Q9H1M3 183 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 CAMTA1Q9Y6Y1 1673 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 CELF2O95319 508 aaKnown RBP17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 RNF207Q6ZRF8 634 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 CCDC84Q86UT8 332 aaPredicted RBP17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 CDAN1Q8IWY9 1227 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 NSUN7Q8NE18 718 aaKnown RBP17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 ERLIN2O94905 339 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 LIFRP42702 1097 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 HUNKP57058 714 aa17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 HERC5Q9UII4 1024 aaKnown RBP17.57■□□□□ 0.4
PPFIA1-222ENST00000532504 CLIC6Q96NY7 704 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 SERTAD1Q9UHV2 236 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 TNNT3P45378 269 aaPredicted RBP17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 TRPC3Q13507 836 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 MTMR2Q13614 643 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 CLEC10AQ8IUN9 316 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 CCDC112Q8NEF3 446 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 FLT1P17948 1338 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 PNMA6FA0A0J9YX94 578 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 EXOC3O60645 756 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 TXNRD3Q86VQ6 643 aa17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 GTPBP4Q9BZE4 634 aaKnown RBP17.56■□□□□ 0.4
PPFIA1-222ENST00000532504 GADD45BO75293 160 aaPredicted RBP17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 KRT19P08727 400 aa17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 POLGP54098 1239 aaPredicted RBP17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 TMED8Q6PL24 325 aaPredicted RBP17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 ENAHQ8N8S7 591 aaPredicted RBP17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.55■□□□□ 0.43e-7■■□□□ 11.9
PPFIA1-222ENST00000532504 NEK11Q8NG66 645 aa17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 NRBP2Q9NSY0 501 aa17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 SEPT9Q9UHD8 586 aaPredicted RBP17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 MTMR6Q9Y217 621 aa17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 DDNO94850 711 aaPredicted RBP17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 CCND2P30279 289 aa17.55■□□□□ 0.4
PPFIA1-222ENST00000532504 FAM160B1Q5W0V3 765 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms