RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ITGAVP06756 1048 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 FOSL1P15407 271 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 CLCN7P51798 805 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 AMPD2Q01433 879 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 SNW1Q13573 536 aaKnown RBP5.7□□□□□ -1.5
SKP1-212ENST00000523966 LONRF2Q1L5Z9 754 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 THAP5Q7Z6K1 395 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 JAZF1Q86VZ6 243 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 FAM177A1Q8N128 213 aaPredicted RBP5.7□□□□□ -1.5
SKP1-212ENST00000523966 ARHGEF39Q8N4T4 335 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 ZBTB38Q8NAP3 1195 aaPredicted RBP5.7□□□□□ -1.5
SKP1-212ENST00000523966 DAGLBQ8NCG7 672 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 UBE2FQ969M7 185 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 RNPC3Q96LT9 517 aaKnown RBP5.7□□□□□ -1.5
SKP1-212ENST00000523966 HSPA12BQ96MM6 686 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 AARSD1Q9BTE6 412 aaKnown RBP5.7□□□□□ -1.5
SKP1-212ENST00000523966 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 APEX2Q9UBZ4 518 aa5.7□□□□□ -1.5
SKP1-212ENST00000523966 CGGBP1Q9UFW8 167 aaPredicted RBP5.7□□□□□ -1.5
SKP1-212ENST00000523966 CCDC163A0A0D9SF12 145 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 A0A1W2PQU0 124 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 SHOXO15266 292 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 APPP05067 770 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 FURINP09958 794 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 HSD3B2P26439 372 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 TPP2P29144 1249 aaPredicted RBP5.69□□□□□ -1.5
SKP1-212ENST00000523966 LTKP29376 864 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 KCNJ6P48051 423 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 PCBP3P57721 371 aaKnown RBP5.69□□□□□ -1.5
SKP1-212ENST00000523966 GRB10Q13322 594 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 ZNF227Q86WZ6 799 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 ZDHHC13Q8IUH4 622 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 HRASLS5Q96KN8 279 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 CCDC140Q96MF4 163 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 FANCLQ9NW38 375 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 EMC9Q9Y3B6 208 aa5.69□□□□□ -1.5
SKP1-212ENST00000523966 CADPSQ9ULU8 1353 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 FAM153BP0C7A2 387 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 ENDOUP21128 410 aaKnown RBP5.68□□□□□ -1.5
SKP1-212ENST00000523966 PPP2R2AP63151 447 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 NKPD1Q17RQ9 610 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 DPY19L1Q2PZI1 675 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 TMEM67Q5HYA8 995 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 INTS5Q6P9B9 1019 aaKnown RBP5.68□□□□□ -1.5
SKP1-212ENST00000523966 NSMFQ6X4W1 530 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 TSPYL5Q86VY4 417 aaPredicted RBP5.68□□□□□ -1.5
SKP1-212ENST00000523966 TRIM59Q8IWR1 403 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 PLD6Q8N2A8 252 aaKnown RBP5.68□□□□□ -1.5
SKP1-212ENST00000523966 ASB11Q8WXH4 323 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 DUSP15Q9H1R2 295 aaPredicted RBP5.68□□□□□ -1.5
SKP1-212ENST00000523966 ZC3H7BQ9UGR2 993 aaKnown RBP5.68□□□□□ -1.5
SKP1-212ENST00000523966 DUSP13Q9UII6 198 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 ST14Q9Y5Y6 855 aa5.68□□□□□ -1.5
SKP1-212ENST00000523966 TRBV23-1A0A0A0MS06 115 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 ESYT3A0FGR9 886 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 PRODHO43272 600 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 VAMP4O75379 141 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 CD3EP07766 207 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 SNRPB2P08579 225 aaKnown RBP5.67□□□□□ -1.5
SKP1-212ENST00000523966 HOXC12P31275 282 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 AOC3Q16853 763 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 PRSS36Q5K4E3 855 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 GTF2IRD2BQ6EKJ0 949 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 TMPRSS7Q7RTY8 843 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 GTF2IRD2Q86UP8 949 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 CREG2Q8IUH2 290 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 SCUBE1Q8IWY4 988 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 SPACA3Q8IXA5 215 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 SYNPOQ8N3V7 929 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 BTN2A2Q8WVV5 523 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 MISP3Q96FF7 219 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 TCTN2Q96GX1 697 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 MRGPRX3Q96LB0 322 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 HDAC8Q9BY41 377 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 RNF112Q9ULX5 631 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 PTCH2Q9Y6C5 1203 aa5.67□□□□□ -1.5
SKP1-212ENST00000523966 SHISA3A0PJX4 238 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 PRR19A6NJB7 356 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 H0Y8X5 98 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 ENPP3O14638 875 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 COBLO75128 1261 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 CPP00450 1065 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 TGFB1P01137 390 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 SYPP08247 313 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 SRFP11831 508 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 ECI1P42126 302 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 SEPHS1P49903 392 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 PRKCQQ04759 706 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 TCEA2Q15560 299 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 CRTC3Q6UUV7 619 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 RNF111Q6ZNA4 994 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 C16orf86Q6ZW13 317 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 KSR1Q8IVT5 923 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 STK11IPQ8N1F8 1099 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 KCTD13Q8WZ19 329 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 IER2Q9BTL4 223 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 DHRS4Q9BTZ2 278 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 CYP26B1Q9NR63 512 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 TMEM260Q9NX78 707 aa5.66□□□□□ -1.5
SKP1-212ENST00000523966 VAV3Q9UKW4 847 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms