RNA–Protein interactions for RNA: ENST00000520400.5

CTNNA1-222, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-222ENST00000520400 CHMP4BP1P59074 171 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 IFRD2Q12894 506 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 C2orf27AQ580R0 203 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 SDE2Q6IQ49 451 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 ZNF662Q6ZS27 426 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 TRIM59Q8IWR1 403 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 BVESQ8NE79 360 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 NETO1Q8TDF5 533 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 TCTN2Q96GX1 697 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 RCC1LQ96I51 464 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 EXOC2Q96KP1 924 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 MKNK2Q9HBH9 465 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 ATP13A1Q9HD20 1204 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 ZSWIM5Q9P217 1185 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 AKT3Q9Y243 479 aa6.86□□□□□ -1.31
CTNNA1-222ENST00000520400 SHROOM4Q9ULL8 1493 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 ARNTLO00327 626 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 KCNH1O95259 989 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 ESR1P03372 595 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 CEBPAP49715 358 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 BNIP3Q12983 259 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 TKFCQ3LXA3 575 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 FAM209AQ5JX71 171 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 ZPBP2Q6X784 338 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 TSPYL5Q86VY4 417 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 FAM177A1Q8N128 213 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 USHBP1Q8N6Y0 703 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 UBE2FQ969M7 185 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 PPP1R14AQ96A00 147 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 ZNF669Q96BR6 464 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 EPN3Q9H201 632 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 KCNH3Q9ULD8 1083 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 SUGT1Q9Y2Z0 365 aa6.85□□□□□ -1.31
CTNNA1-222ENST00000520400 A0A087WZG4 1122 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 ADAMTS4O75173 837 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 PPM1BO75688 479 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 IFNGR1P15260 489 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 TPP2P29144 1249 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 L1CAMP32004 1257 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 CPSF6Q16630 551 aaKnown RBP eCLIP6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 DPY19L1Q2PZI1 675 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 NOL9Q5SY16 702 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 GTF2IRD2BQ6EKJ0 949 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 DENND5AQ6IQ26 1287 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 ZNF574Q6ZN55 896 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 SPRED2Q7Z698 418 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 GTF2IRD2Q86UP8 949 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 ZBTB38Q8NAP3 1195 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 OSBP2Q969R2 916 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 GBP3Q9H0R5 595 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 PRR13Q9NZ81 148 aa6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 GPR55Q9Y2T6 319 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-222ENST00000520400 IFI16Q16666 785 aaKnown RBP6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 PRSS53Q2L4Q9 553 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 RTP2Q5QGT7 225 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 DAGLBQ8NCG7 672 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 THAP3Q8WTV1 239 aaPredicted RBP6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 C1orf159Q96HA4 380 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 SGSM3Q96HU1 749 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 SLC12A9Q9BXP2 914 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 FOXP3Q9BZS1 431 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 FANCLQ9NW38 375 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 TMEM260Q9NX78 707 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 PCDHA11Q9Y5I1 949 aa6.83□□□□□ -1.32
CTNNA1-222ENST00000520400 TMEM82A0PJX8 343 aa6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 BLACEA4D250 179 aa6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 PPP1R12AO14974 1030 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 DLX3O60479 287 aa6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 CLCN7P51798 805 aa6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 CBX2Q14781 532 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 EGFLAMQ63HQ2 1017 aa6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 ARHGAP27Q6ZUM4 889 aa6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 KISS1RQ969F8 398 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 FCRL3Q96P31 734 aaPredicted RBP6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 DSCC1Q9BVC3 393 aa6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 LRP2BPQ9P2M1 347 aa6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 EBF1Q9UH73 591 aa6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 DIS3Q9Y2L1 958 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 TMA7Q9Y2S6 64 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-222ENST00000520400 STXBP3O00186 592 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 ENPP3O14638 875 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 VAV1P15498 845 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 TEKQ02763 1124 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 NTRK3Q16288 839 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 AOC3Q16853 763 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 SLC51AQ86UW1 340 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 LRRC47Q8N1G4 583 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 ZNF655Q8N720 491 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 KREMEN2Q8NCW0 462 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 ENOX1Q8TC92 643 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 AARSD1Q9BTE6 412 aaKnown RBP6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 IER2Q9BTL4 223 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 NKX2-4Q9H2Z4 354 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 ZNF281Q9Y2X9 895 aa6.81□□□□□ -1.32
CTNNA1-222ENST00000520400 TMEM265A0A087WTH1 108 aa6.8□□□□□ -1.32
CTNNA1-222ENST00000520400 PRODHO43272 600 aa6.8□□□□□ -1.32
CTNNA1-222ENST00000520400 ZNF205O95201 554 aa6.8□□□□□ -1.32
CTNNA1-222ENST00000520400 CD3EP07766 207 aa6.8□□□□□ -1.32
CTNNA1-222ENST00000520400 SYPP08247 313 aa6.8□□□□□ -1.32
CTNNA1-222ENST00000520400 C6orf222P0C671 652 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms