RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 RASA1P20936 1047 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 CDK8P49336 464 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 PLCD1P51178 756 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 NDUFA8P51970 172 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 TUBB4BP68371 445 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 EVX2Q03828 476 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 PTPAQ15257 358 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 ELF2Q15723 593 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 NEDD1Q8NHV4 660 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 DYNLL2Q96FJ2 89 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 IL17RBQ9NRM6 502 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 IFNKQ9P0W0 207 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 SAP30BPQ9UHR5 308 aaKnown RBP20.8■□□□□ 0.92
SDC2-202ENST00000518385 CEP131Q9UPN4 1083 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 ARID5BQ14865 1188 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 AXDND1Q5T1B0 1012 aaPredicted RBP20.8■□□□□ 0.92
SDC2-202ENST00000518385 OGFOD1Q8N543 542 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 PHF20Q9BVI0 1012 aa20.8■□□□□ 0.92
SDC2-202ENST00000518385 V9GY48 417 aaPredicted RBP20.8■□□□□ 0.92
SDC2-202ENST00000518385 CNTNAP5Q8WYK1 1306 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 EFCAB8A8MWE9 144 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 BTBD18B2RXH4 712 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 NMT2O60551 498 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 CUTAO60888 179 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 MMP14P50281 582 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 FANCCQ00597 558 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 MYL5Q02045 173 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 GRM4Q14833 912 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 NCAPHQ15003 741 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 TEX35Q5T0J7 233 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 ARMCX5Q6P1M9 558 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 CCDC82Q8N4S0 544 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 PNMA1Q8ND90 353 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 IDI2Q9BXS1 227 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 TMX1Q9H3N1 280 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 DDX4Q9NQI0 724 aaKnown RBP20.79■□□□□ 0.92
SDC2-202ENST00000518385 SH3GLB2Q9NR46 395 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 TRMT1Q9NXH9 659 aaKnown RBP20.79■□□□□ 0.92
SDC2-202ENST00000518385 MYH1P12882 1939 aa20.79■□□□□ 0.92
SDC2-202ENST00000518385 GOLGB1Q14789 3259 aaKnown RBP20.78■□□□□ 0.92
SDC2-202ENST00000518385 NPM3O75607 178 aaKnown RBP20.78■□□□□ 0.92
SDC2-202ENST00000518385 PLEKHA8P1O95397 391 aa20.78■□□□□ 0.92
SDC2-202ENST00000518385 BMP15O95972 392 aa20.78■□□□□ 0.92
SDC2-202ENST00000518385 KRT2P35908 639 aa20.78■□□□□ 0.92
SDC2-202ENST00000518385 EIF6P56537 245 aaKnown RBP20.78■□□□□ 0.92
SDC2-202ENST00000518385 DPCR1Q3MIW9 517 aa20.78■□□□□ 0.92
SDC2-202ENST00000518385 CT47A1Q5JQC4 288 aaPredicted RBP20.78■□□□□ 0.92
SDC2-202ENST00000518385 SRBD1Q8N5C6 995 aaKnown RBP20.78■□□□□ 0.92
SDC2-202ENST00000518385 PRMT6Q96LA8 375 aaPredicted RBP20.78■□□□□ 0.92
SDC2-202ENST00000518385 SWAP70Q9UH65 585 aa20.78■□□□□ 0.92
SDC2-202ENST00000518385 ARHGAP6O43182 974 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 LMNB1P20700 586 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 RPS12P25398 132 aaKnown RBP20.77■□□□□ 0.92
SDC2-202ENST00000518385 SMARCA1P28370 1054 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 NOVP48745 357 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 PICALMQ13492 652 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 JAKMIP3Q5VZ66 844 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 CMTR1Q8N1G2 835 aaKnown RBP20.77■□□□□ 0.92
SDC2-202ENST00000518385 MTMR14Q8NCE2 650 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 UBXN4Q92575 508 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 TSPYL1Q9H0U9 437 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 DACH1Q9UI36 760 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 KCNJ14Q9UNX9 436 aa20.77■□□□□ 0.92
SDC2-202ENST00000518385 A0A1B0GVL5 298 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 SCG2P13521 617 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 DLGAP5Q15398 846 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 PFKFB3Q16875 520 aaPredicted RBP20.76■□□□□ 0.91
SDC2-202ENST00000518385 TMCO3Q6UWJ1 677 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 HPSEQ9Y251 543 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 PLIN4Q96Q06 1357 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 SPDYE2BA6NHP3 402 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 UBE2Q2LH0YL09 131 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 SPDYE6P0CI01 402 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 CALML3P27482 149 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 NFIAQ12857 509 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 TUBB2AQ13885 445 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 SLC4A8Q2Y0W8 1093 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 SYT10Q6XYQ8 523 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 MNS1Q8NEH6 495 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 TUBB2BQ9BVA1 445 aa20.76■□□□□ 0.91
SDC2-202ENST00000518385 TDRD3Q9H7E2 651 aaKnown RBP20.76■□□□□ 0.91
SDC2-202ENST00000518385 V9GYY5 206 aaPredicted RBP20.76■□□□□ 0.91
SDC2-202ENST00000518385 TOP1P11387 765 aaKnown RBP20.75■□□□□ 0.91
SDC2-202ENST00000518385 PFKFB1P16118 471 aa20.75■□□□□ 0.91
SDC2-202ENST00000518385 YBX3P16989 372 aaKnown RBP eCLIP20.75■□□□□ 0.91
SDC2-202ENST00000518385 SYKP43405 635 aa20.75■□□□□ 0.91
SDC2-202ENST00000518385 GABPAQ06546 454 aa20.75■□□□□ 0.91
SDC2-202ENST00000518385 NAA30Q147X3 362 aaPredicted RBP20.75■□□□□ 0.91
SDC2-202ENST00000518385 HOMER1Q86YM7 354 aa20.75■□□□□ 0.91
SDC2-202ENST00000518385 KRI1Q8N9T8 703 aaKnown RBP20.75■□□□□ 0.91
SDC2-202ENST00000518385 ZNF579Q8NAF0 562 aaKnown RBP20.75■□□□□ 0.91
SDC2-202ENST00000518385 TMEM47Q9BQJ4 181 aa20.75■□□□□ 0.91
SDC2-202ENST00000518385 FAM198AQ9UFP1 575 aa20.75■□□□□ 0.91
SDC2-202ENST00000518385 GALNT17Q6IS24 598 aa20.74■□□□□ 0.91
SDC2-202ENST00000518385 VSTM4Q8IW00 320 aa20.74■□□□□ 0.91
SDC2-202ENST00000518385 DPF2Q92785 391 aa20.74■□□□□ 0.91
SDC2-202ENST00000518385 DICER1Q9UPY3 1922 aaKnown RBP20.73■□□□□ 0.91
SDC2-202ENST00000518385 PALM3A6NDB9 673 aaPredicted RBP20.73■□□□□ 0.91
SDC2-202ENST00000518385 ZRANB2O95218 330 aaKnown RBP eCLIP20.73■□□□□ 0.91
SDC2-202ENST00000518385 TRAPPC10P48553 1259 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms